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The map label for this gene is 167622617

Identifier: 167622617

GI number: 167622617

Start: 835534

End: 836595

Strand: Reverse

Name: 167622617

Synonym: Shal_0677

Alternate gene names: NA

Gene position: 836595-835534 (Counterclockwise)

Preceding gene: 167622620

Following gene: 167622616

Centisome position: 16.01

GC content: 44.92

Gene sequence:

>1062_bases
ATGAAAAAAACTGTTCTGTCTGCCACCATTATTTCAGCACTAGCCGCCACCTCTTTTACAGCACTAGCTGATGGCCCCAA
TTTCTATGGCCGTGCCGATCTTGCCATCACTAACTCTGACATGGGCATTGCAACGCAAAACCAAAAGTCAGGTACTGTTA
TTGAGAACAACTTCTCATGGTTGGGTGTGAAAGGTACTGAAGCGATCAACAGCGAGCTTGAAGTGGTTTATCAGATGGAG
TTTGGTGTAAACAACTTCGATAACTCAGGCAACACTTTCTCTGCTCGTAACACCTTCCTAGGCCTTAAGTCTGCTACTGC
AGGTACTATCCTAGTGGGTCGTAACGACACCGTATTTAAAGCTTCTGAAGGTGGTTTCGATATTTTCGGTAACACTAACT
CAGATATCGACCTATTCGCTGCAGGTCAATCTCGTAACGCCGATGGTTTCACTTACTACTCGCCAAAAATTGCCGGCCTA
GTGACATTAAATGCTACGTATTTAATGGACGATAACTATGCTCAAGAAGTTGACGGCAAGAAAGTTGACACCGACAACAT
GTATGCCCTAAGTGCAACGATTGGTGATAAGGGCTTAAAAGCCCAGAACTACTATGTTGCAGCTGCATATAACGACAGCA
TAGATAACGTTAAGGCTTACCGCGGCGTGGCTCAAGTTAAACTTGGCCAGGTTATTCTAGGTGGTTTCTACCAAAACAGT
GAGCACGTTGACAGCAAGTACGCCAACCTTGAAGGTGACACTTACTTCGTAAACGCTGCATACGTTATGGGTGACCTAAA
GCTTAAAGCTATGTACGGTAGTGACGACTCTGGCTTAGGTAAGTATGTTAGCCGCTATGTCGGTAGCGTTGACGGTGCCA
CACTAGAAAATGTTAGCGATGTCGATCTACAGCAGTTCAGCGTGGGTGCTGACTACCGTCTAAGCAAAAATACCTTAGTA
TATGGTCACTACACTAAGTACGATGGCGACATAAAACTAGCTGGTGCAACGCAAGATCTAAGTGATGATATCTTCACTGT
TGGTATGCGCTTCGACTTCTAA

Upstream 100 bases:

>100_bases
CCCGACAAATACAGCTTCACTCTTGTTGGCCCACGATATAGGGCTAACGATTATTGATAGCCTGCAAACTCAAATAGCAA
TTCGCTACAGGAAGATAAAA

Downstream 100 bases:

>100_bases
TCTATTGGTTAGAAAGTTAAATAAGCTTTAACAAATAGACTTTAAAGGCAGCACTAGCTGCCTTTTTTAATTTTGTGGTT
CGTCTAAAATCAAGACTCCC

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Outer Membrane Porin Protein; Gram-Negative Porin Superfamily; Porin Signal Peptide Protein

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKKTVLSATIISALAATSFTALADGPNFYGRADLAITNSDMGIATQNQKSGTVIENNFSWLGVKGTEAINSELEVVYQME
FGVNNFDNSGNTFSARNTFLGLKSATAGTILVGRNDTVFKASEGGFDIFGNTNSDIDLFAAGQSRNADGFTYYSPKIAGL
VTLNATYLMDDNYAQEVDGKKVDTDNMYALSATIGDKGLKAQNYYVAAAYNDSIDNVKAYRGVAQVKLGQVILGGFYQNS
EHVDSKYANLEGDTYFVNAAYVMGDLKLKAMYGSDDSGLGKYVSRYVGSVDGATLENVSDVDLQQFSVGADYRLSKNTLV
YGHYTKYDGDIKLAGATQDLSDDIFTVGMRFDF

Sequences:

>Translated_353_residues
MKKTVLSATIISALAATSFTALADGPNFYGRADLAITNSDMGIATQNQKSGTVIENNFSWLGVKGTEAINSELEVVYQME
FGVNNFDNSGNTFSARNTFLGLKSATAGTILVGRNDTVFKASEGGFDIFGNTNSDIDLFAAGQSRNADGFTYYSPKIAGL
VTLNATYLMDDNYAQEVDGKKVDTDNMYALSATIGDKGLKAQNYYVAAAYNDSIDNVKAYRGVAQVKLGQVILGGFYQNS
EHVDSKYANLEGDTYFVNAAYVMGDLKLKAMYGSDDSGLGKYVSRYVGSVDGATLENVSDVDLQQFSVGADYRLSKNTLV
YGHYTKYDGDIKLAGATQDLSDDIFTVGMRFDF
>Mature_353_residues
MKKTVLSATIISALAATSFTALADGPNFYGRADLAITNSDMGIATQNQKSGTVIENNFSWLGVKGTEAINSELEVVYQME
FGVNNFDNSGNTFSARNTFLGLKSATAGTILVGRNDTVFKASEGGFDIFGNTNSDIDLFAAGQSRNADGFTYYSPKIAGL
VTLNATYLMDDNYAQEVDGKKVDTDNMYALSATIGDKGLKAQNYYVAAAYNDSIDNVKAYRGVAQVKLGQVILGGFYQNS
EHVDSKYANLEGDTYFVNAAYVMGDLKLKAMYGSDDSGLGKYVSRYVGSVDGATLENVSDVDLQQFSVGADYRLSKNTLV
YGHYTKYDGDIKLAGATQDLSDDIFTVGMRFDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38086; Mature: 38086

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVLSATIISALAATSFTALADGPNFYGRADLAITNSDMGIATQNQKSGTVIENNFSW
CCCHHHHHHHHHHHHHHCEEEECCCCCCCCEEEEEEECCCCCEEECCCCCCCEEECCCEE
LGVKGTEAINSELEVVYQMEFGVNNFDNSGNTFSARNTFLGLKSATAGTILVGRNDTVFK
EEECCCHHCCCCEEEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEECCCCCEEE
ASEGGFDIFGNTNSDIDLFAAGQSRNADGFTYYSPKIAGLVTLNATYLMDDNYAQEVDGK
ECCCCEEEECCCCCCEEEEEECCCCCCCCEEEECCCEEEEEEEEEEEEECCCCHHHCCCC
KVDTDNMYALSATIGDKGLKAQNYYVAAAYNDSIDNVKAYRGVAQVKLGQVILGGFYQNS
CCCCCCEEEEEEEECCCCCEECCEEEEEEECCCCHHHHHHCCHHHEEECEEEEEEEECCC
EHVDSKYANLEGDTYFVNAAYVMGDLKLKAMYGSDDSGLGKYVSRYVGSVDGATLENVSD
CCCCHHHCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCC
VDLQQFSVGADYRLSKNTLVYGHYTKYDGDIKLAGATQDLSDDIFTVGMRFDF
CCHHHEECCCCEEECCCEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKKTVLSATIISALAATSFTALADGPNFYGRADLAITNSDMGIATQNQKSGTVIENNFSW
CCCHHHHHHHHHHHHHHCEEEECCCCCCCCEEEEEEECCCCCEEECCCCCCCEEECCCEE
LGVKGTEAINSELEVVYQMEFGVNNFDNSGNTFSARNTFLGLKSATAGTILVGRNDTVFK
EEECCCHHCCCCEEEEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEECCCCCEEE
ASEGGFDIFGNTNSDIDLFAAGQSRNADGFTYYSPKIAGLVTLNATYLMDDNYAQEVDGK
ECCCCEEEECCCCCCEEEEEECCCCCCCCEEEECCCEEEEEEEEEEEEECCCCHHHCCCC
KVDTDNMYALSATIGDKGLKAQNYYVAAAYNDSIDNVKAYRGVAQVKLGQVILGGFYQNS
CCCCCCEEEEEEEECCCCCEECCEEEEEEECCCCHHHHHHCCHHHEEECEEEEEEEECCC
EHVDSKYANLEGDTYFVNAAYVMGDLKLKAMYGSDDSGLGKYVSRYVGSVDGATLENVSD
CCCCHHHCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCC
VDLQQFSVGADYRLSKNTLVYGHYTKYDGDIKLAGATQDLSDDIFTVGMRFDF
CCHHHEECCCCEEECCCEEEEEEEEEECCCEEEEECCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA