| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cutA [H]
Identifier: 167622611
GI number: 167622611
Start: 828983
End: 829306
Strand: Reverse
Name: cutA [H]
Synonym: Shal_0671
Alternate gene names: 167622611
Gene position: 829306-828983 (Counterclockwise)
Preceding gene: 167622613
Following gene: 167622610
Centisome position: 15.87
GC content: 45.99
Gene sequence:
>324_bases ATGCAAAACGAATTTTTGTTAGTGATCACCAGCTGCCCCAGCGAGGAGCAAGCCAAAATTCTTGCTCGTGAGCTGGTTAA AAACAAGCTTGCTGCCTGCGTACAGATCTCTCAAGGGATCACCTCCGTATATGAGTGGCAAGGAGAGCTGTGTGAAGAAC AGGAGTTCAGTTTGCAAATTAAATGCTTAGCGCAGCATTACAGTGCTATAGAGCACACACTCTCTAAGCTGCACCCCTAT GATGTACCCGAGCTAATTGCAGTTCCTGTTACCCAAGGACTGCCAGCCTATTTTGATTGGATAAAAGAAACTACACAGCC ATGA
Upstream 100 bases:
>100_bases TAAAGCCGTTCGCCTTATTGATAGCCATTGTACCTTGATTGGCATAATACAATAGTTGGCTTAATACAATTTTAATCTGT TGGACAATAGAAATAGTTTA
Downstream 100 bases:
>100_bases AAAGAATCATAAACCTGTTTTTAGCCTCACTACTGCTGCTTACGCCACTGGCGCACGCTGACGGCATTTTCAGTAGTAAT AAGTTTGACTTTTTAAAGGG
Product: CutA1 divalent ion tolerance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQIKCLAQHYSAIEHTLSKLHPY DVPELIAVPVTQGLPAYFDWIKETTQP
Sequences:
>Translated_107_residues MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQIKCLAQHYSAIEHTLSKLHPY DVPELIAVPVTQGLPAYFDWIKETTQP >Mature_107_residues MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQIKCLAQHYSAIEHTLSKLHPY DVPELIAVPVTQGLPAYFDWIKETTQP
Specific function: Involved in resistance toward heavy metals [H]
COG id: COG1324
COG function: function code P; Uncharacterized protein involved in tolerance to divalent cations
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutA family [H]
Homologues:
Organism=Homo sapiens, GI62526026, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=7e-18, Organism=Homo sapiens, GI62526024, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=8e-18, Organism=Homo sapiens, GI62526022, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=8e-18, Organism=Homo sapiens, GI7706244, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=8e-18, Organism=Homo sapiens, GI62198241, Length=96, Percent_Identity=40.625, Blast_Score=86, Evalue=9e-18, Organism=Escherichia coli, GI1790579, Length=99, Percent_Identity=36.3636363636364, Blast_Score=74, Evalue=1e-15, Organism=Caenorhabditis elegans, GI32565476, Length=103, Percent_Identity=29.126213592233, Blast_Score=62, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641937, Length=98, Percent_Identity=38.7755102040816, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004323 - InterPro: IPR011322 [H]
Pfam domain/function: PF03091 CutA1 [H]
EC number: NA
Molecular weight: Translated: 12150; Mature: 12150
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQI CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KCLAQHYSAIEHTLSKLHPYDVPELIAVPVTQGLPAYFDWIKETTQP HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MQNEFLLVITSCPSEEQAKILARELVKNKLAACVQISQGITSVYEWQGELCEEQEFSLQI CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KCLAQHYSAIEHTLSKLHPYDVPELIAVPVTQGLPAYFDWIKETTQP HHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA