| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is hyuA [H]
Identifier: 167622578
GI number: 167622578
Start: 771917
End: 773317
Strand: Direct
Name: hyuA [H]
Synonym: Shal_0638
Alternate gene names: 167622578
Gene position: 771917-773317 (Clockwise)
Preceding gene: 167622577
Following gene: 167622579
Centisome position: 14.77
GC content: 44.83
Gene sequence:
>1401_bases ATGGGGTCAAAATCTACACTCATTATTAACGGCACCCTTGTCGACGCCCAGAAACAGTCACAGCAACAACTGCTCATTAT TGATGGCAAAATTGCAGCCGTCGACAAGGTGATCACTGATTACCCCGTTGATACCGAGGTTATAGACGCATCAGGTCTTT ATGTGATGCCTGGTGGTATCGATGTACACACCCATTTTAATATCGATGTGGGCATCGCTCGTAGTGTCGATGATTTTTAT ACCGGGACTCGCTCTGCGGCCTGCGGTGGCACCACCATGATTATCGATCATATGGGCTTTGGACCGAAAGGTTGCGATCT TTTTCACCAGCTTAAGGTCTATAAAGGGTTTGCTAAAGACAAGGCGGTAATCGATTACAGCTTTCATGGGGTGATCCAAC ATATCAATGATGAAGTTATCGAAGATATGCATGCCATGGTACATCGTGAGGGGATCTCAAGTTTTAAACTTTATCTGACT TATAATTATAAGCTCGATGACACGGGTGCCTTGCAGGCCCTTAATCGCCTCAACCAAGTTCAAGCCTTAACTGCTGTGCA TCCCGAAAATGATGCGGCTATCGCTTTAAAACGCAGCCAACTAATAAAAGCAGGTAAAACCTCAGCTAAATATCATGCGA TCAGTCGTCCATTAGAGTGTGAAGCTGAAGCGATTGCTCGGATGATTAATTTGGCAAAACTTGCCGATGATGCGCCGCTT TATATTGTTCATCTCTCCAATGGTCTAGGGCTGGATTATATCCGCTTGGCAAAGCAGAATCAGCAAGCAGTATGGAGCGA AACGTGCCCACAATACCTACTTCTTGATGACAAGCTTTATGAAAATGAGGATGGTGCTAAATATTTAATGAGCCCACCAC TTAGGCCCAAGGCTGAGCTAGAGAAACTCTGGCAAGGCGTCGAAGATGGCAGCATAGATACGGTTGCGACTGACCACTGT GCTTTTTCCTATAAAGAGCAAAAAGTATCAGGTAATGATGACTTTTCTGTTTGCCCAAATGGCATGCCAGGAGTTGAAAC CCGTATGCCGCTGCTGTTTTCAGAGGGAGTGATGTCGGGAAGAATTACCCCAGAAAAATTCGTTGAAATAACTAGCTTTA AACCTGCAAAACTGTTCGGCCTTTATCCACAAAAAGGCTGCCTTCTACCCGGTTCCGATGCGGATATTGTGTTATTCAAT CCGGAACTTAAGGTCCATATCAGTCATGAAAACCTACATGACAATAGTGACTATACCCCTTATGAATCACACCAAGTGAA CGGATGGCCCGTCATGACTATCAGTCGTGGAGAAGTCGTGGCATGTAATGGTGAGTTTCTCGGGAAAGCCGGTGCTGGTC AATTTGTGCATCGTTTGCCATTCGATAAAAACAAAATCTAA
Upstream 100 bases:
>100_bases CACTTTTTGTTTTATTCATCTTTTTCATAGTTTTACTTACTCTTTAAGTACTTTTTCAACACTATTTATTTAAACATTAT TTTAGTTTCAGGAGCACATC
Downstream 100 bases:
>100_bases TTAGTCATTATCTGTCATCTCTATCACTTAGCAAAGAATGAATTAAAGTAGAGCTAAGTGACAGAAAATTAAGGAATATC TATGAAACCTATTGCTGTTG
Product: phenylhydantoinase
Products: NA
Alternate protein names: Hydantoin-utilizing enzyme hyuA [H]
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MGSKSTLIINGTLVDAQKQSQQQLLIIDGKIAAVDKVITDYPVDTEVIDASGLYVMPGGIDVHTHFNIDVGIARSVDDFY TGTRSAACGGTTMIIDHMGFGPKGCDLFHQLKVYKGFAKDKAVIDYSFHGVIQHINDEVIEDMHAMVHREGISSFKLYLT YNYKLDDTGALQALNRLNQVQALTAVHPENDAAIALKRSQLIKAGKTSAKYHAISRPLECEAEAIARMINLAKLADDAPL YIVHLSNGLGLDYIRLAKQNQQAVWSETCPQYLLLDDKLYENEDGAKYLMSPPLRPKAELEKLWQGVEDGSIDTVATDHC AFSYKEQKVSGNDDFSVCPNGMPGVETRMPLLFSEGVMSGRITPEKFVEITSFKPAKLFGLYPQKGCLLPGSDADIVLFN PELKVHISHENLHDNSDYTPYESHQVNGWPVMTISRGEVVACNGEFLGKAGAGQFVHRLPFDKNKI
Sequences:
>Translated_466_residues MGSKSTLIINGTLVDAQKQSQQQLLIIDGKIAAVDKVITDYPVDTEVIDASGLYVMPGGIDVHTHFNIDVGIARSVDDFY TGTRSAACGGTTMIIDHMGFGPKGCDLFHQLKVYKGFAKDKAVIDYSFHGVIQHINDEVIEDMHAMVHREGISSFKLYLT YNYKLDDTGALQALNRLNQVQALTAVHPENDAAIALKRSQLIKAGKTSAKYHAISRPLECEAEAIARMINLAKLADDAPL YIVHLSNGLGLDYIRLAKQNQQAVWSETCPQYLLLDDKLYENEDGAKYLMSPPLRPKAELEKLWQGVEDGSIDTVATDHC AFSYKEQKVSGNDDFSVCPNGMPGVETRMPLLFSEGVMSGRITPEKFVEITSFKPAKLFGLYPQKGCLLPGSDADIVLFN PELKVHISHENLHDNSDYTPYESHQVNGWPVMTISRGEVVACNGEFLGKAGAGQFVHRLPFDKNKI >Mature_465_residues GSKSTLIINGTLVDAQKQSQQQLLIIDGKIAAVDKVITDYPVDTEVIDASGLYVMPGGIDVHTHFNIDVGIARSVDDFYT GTRSAACGGTTMIIDHMGFGPKGCDLFHQLKVYKGFAKDKAVIDYSFHGVIQHINDEVIEDMHAMVHREGISSFKLYLTY NYKLDDTGALQALNRLNQVQALTAVHPENDAAIALKRSQLIKAGKTSAKYHAISRPLECEAEAIARMINLAKLADDAPLY IVHLSNGLGLDYIRLAKQNQQAVWSETCPQYLLLDDKLYENEDGAKYLMSPPLRPKAELEKLWQGVEDGSIDTVATDHCA FSYKEQKVSGNDDFSVCPNGMPGVETRMPLLFSEGVMSGRITPEKFVEITSFKPAKLFGLYPQKGCLLPGSDADIVLFNP ELKVHISHENLHDNSDYTPYESHQVNGWPVMTISRGEVVACNGEFLGKAGAGQFVHRLPFDKNKI
Specific function: Catalyzes the stereospecific hydrolysis of the cyclic amide bond of D-hydantoin derivatives with an aromatic side chains at the 5'-position. Has no activity on dihydropyrimidines. The physiological function is unknown [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=471, Percent_Identity=36.0934182590234, Blast_Score=281, Evalue=8e-76, Organism=Homo sapiens, GI19923821, Length=459, Percent_Identity=35.7298474945534, Blast_Score=260, Evalue=2e-69, Organism=Homo sapiens, GI4503379, Length=466, Percent_Identity=32.618025751073, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI4503377, Length=465, Percent_Identity=32.0430107526882, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI4503051, Length=465, Percent_Identity=32.4731182795699, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI190194363, Length=465, Percent_Identity=32.4731182795699, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI62422571, Length=465, Percent_Identity=32.4731182795699, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI18105007, Length=418, Percent_Identity=24.1626794258373, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI87082175, Length=456, Percent_Identity=63.3771929824561, Blast_Score=609, Evalue=1e-175, Organism=Escherichia coli, GI1786722, Length=463, Percent_Identity=29.3736501079914, Blast_Score=159, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17539558, Length=463, Percent_Identity=37.7969762419007, Blast_Score=276, Evalue=1e-74, Organism=Caenorhabditis elegans, GI71989490, Length=470, Percent_Identity=37.0212765957447, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI86575075, Length=466, Percent_Identity=28.1115879828326, Blast_Score=147, Evalue=9e-36, Organism=Caenorhabditis elegans, GI193204318, Length=419, Percent_Identity=24.8210023866348, Blast_Score=98, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6322218, Length=464, Percent_Identity=26.2931034482759, Blast_Score=120, Evalue=3e-28, Organism=Drosophila melanogaster, GI221377917, Length=475, Percent_Identity=35.7894736842105, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI17137462, Length=462, Percent_Identity=34.6320346320346, Blast_Score=248, Evalue=7e-66, Organism=Drosophila melanogaster, GI24644287, Length=306, Percent_Identity=34.9673202614379, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI24644289, Length=236, Percent_Identity=36.0169491525424, Blast_Score=133, Evalue=3e-31, Organism=Drosophila melanogaster, GI24642586, Length=415, Percent_Identity=26.9879518072289, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI18859883, Length=461, Percent_Identity=23.4273318872017, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: 3.-.-.- [C]
Molecular weight: Translated: 51409; Mature: 51278
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKSTLIINGTLVDAQKQSQQQLLIIDGKIAAVDKVITDYPVDTEVIDASGLYVMPGGI CCCCCEEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEECCCCCEEECCCE DVHTHFNIDVGIARSVDDFYTGTRSAACGGTTMIIDHMGFGPKGCDLFHQLKVYKGFAKD EEEEEEEEEEEEECCCHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCC KAVIDYSFHGVIQHINDEVIEDMHAMVHREGISSFKLYLTYNYKLDDTGALQALNRLNQV CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH QALTAVHPENDAAIALKRSQLIKAGKTSAKYHAISRPLECEAEAIARMINLAKLADDAPL HHHEEECCCCCCEEEEEHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCE YIVHLSNGLGLDYIRLAKQNQQAVWSETCPQYLLLDDKLYENEDGAKYLMSPPLRPKAEL EEEECCCCCCCHHHHHHCCCCCHHHHHCCCCEEEECCHHCCCCCCCEEECCCCCCCHHHH EKLWQGVEDGSIDTVATDHCAFSYKEQKVSGNDDFSVCPNGMPGVETRMPLLFSEGVMSG HHHHCCCCCCCCCEEEECCCEECCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC RITPEKFVEITSFKPAKLFGLYPQKGCLLPGSDADIVLFNPELKVHISHENLHDNSDYTP CCCHHHHEEECCCCCCCEEECCCCCCEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCC YESHQVNGWPVMTISRGEVVACNGEFLGKAGAGQFVHRLPFDKNKI CCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure GSKSTLIINGTLVDAQKQSQQQLLIIDGKIAAVDKVITDYPVDTEVIDASGLYVMPGGI CCCCEEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEECCCCCEEECCCE DVHTHFNIDVGIARSVDDFYTGTRSAACGGTTMIIDHMGFGPKGCDLFHQLKVYKGFAKD EEEEEEEEEEEEECCCHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCC KAVIDYSFHGVIQHINDEVIEDMHAMVHREGISSFKLYLTYNYKLDDTGALQALNRLNQV CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHHHHH QALTAVHPENDAAIALKRSQLIKAGKTSAKYHAISRPLECEAEAIARMINLAKLADDAPL HHHEEECCCCCCEEEEEHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCE YIVHLSNGLGLDYIRLAKQNQQAVWSETCPQYLLLDDKLYENEDGAKYLMSPPLRPKAEL EEEECCCCCCCHHHHHHCCCCCHHHHHCCCCEEEECCHHCCCCCCCEEECCCCCCCHHHH EKLWQGVEDGSIDTVATDHCAFSYKEQKVSGNDDFSVCPNGMPGVETRMPLLFSEGVMSG HHHHCCCCCCCCCEEEECCCEECCHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC RITPEKFVEITSFKPAKLFGLYPQKGCLLPGSDADIVLFNPELKVHISHENLHDNSDYTP CCCHHHHEEECCCCCCCEEECCCCCCEECCCCCCCEEEECCCEEEEEECCCCCCCCCCCC YESHQVNGWPVMTISRGEVVACNGEFLGKAGAGQFVHRLPFDKNKI CCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA