Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is resA [H]

Identifier: 167622488

GI number: 167622488

Start: 660391

End: 660975

Strand: Reverse

Name: resA [H]

Synonym: Shal_0548

Alternate gene names: 167622488

Gene position: 660975-660391 (Counterclockwise)

Preceding gene: 167622489

Following gene: 167622486

Centisome position: 12.65

GC content: 44.79

Gene sequence:

>585_bases
ATGAATAAAACACATTTACTGAGCTGCTTACTGGTTTTCTCATCCCTGCTTATACCAGCACAAGCTCAAGTCGCCTCAAA
TAAGGTTTATAGCACAGGTAAAGCCATTGAGAAGCCGCTTATCATGTCACGCTTTATCGAGATGCAGTCGGCTCGCTCGG
TACCTGAAGTGATGTTTACCGACACTAAAGGTGAGCAAATTAGCTTAAAGCAATACAAAGGGAAATTAGTATTAGTAAAC
CTTTGGGCAACGTGGTGCGCACCGTGTATCAAAGAGATCCCGCAGATGGAAAACATCCGCCAAGTTAATAAAAACAACAA
CTTGGTTGTGGTTCCTATCTCAATTGACGAAGAGAGTGACAAGGTACAGGCCTTCTTAGAACGCCATGAACTTGGCCATT
ACCAGACTTGGTTAGATCCTCAGAAAACCATCGACCAAATTATGCCAGCCGACGTGGTACCTGCAACTTACGTGTTTGAC
GGCTCAGGCAACCTAATAGGCTTTTTACGTGGTTATCTTGATTGGGGCGACAAAGAAGTGCAGCCGTATCTTGAGAAGCT
AACGGCAAAGTACGCGCATCGTTAG

Upstream 100 bases:

>100_bases
CTCTGGTTTGGTCCATTACTCCTTCTATTCGGCATAATCGCCTTCGCTGCGATTTGGATCCGTGAACAACGTAAACATCA
AGATATTAAGGCTAACACCC

Downstream 100 bases:

>100_bases
TTCTAGGATCAAGCTAAGACGGTAATGCCGATAGGGGCTGAGACGGAAAGGCAGGATCAAAACCCATTGTAGGTCGGCGT
TTATGCCGTCTTTTGACTGT

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNKTHLLSCLLVFSSLLIPAQAQVASNKVYSTGKAIEKPLIMSRFIEMQSARSVPEVMFTDTKGEQISLKQYKGKLVLVN
LWATWCAPCIKEIPQMENIRQVNKNNNLVVVPISIDEESDKVQAFLERHELGHYQTWLDPQKTIDQIMPADVVPATYVFD
GSGNLIGFLRGYLDWGDKEVQPYLEKLTAKYAHR

Sequences:

>Translated_194_residues
MNKTHLLSCLLVFSSLLIPAQAQVASNKVYSTGKAIEKPLIMSRFIEMQSARSVPEVMFTDTKGEQISLKQYKGKLVLVN
LWATWCAPCIKEIPQMENIRQVNKNNNLVVVPISIDEESDKVQAFLERHELGHYQTWLDPQKTIDQIMPADVVPATYVFD
GSGNLIGFLRGYLDWGDKEVQPYLEKLTAKYAHR
>Mature_194_residues
MNKTHLLSCLLVFSSLLIPAQAQVASNKVYSTGKAIEKPLIMSRFIEMQSARSVPEVMFTDTKGEQISLKQYKGKLVLVN
LWATWCAPCIKEIPQMENIRQVNKNNNLVVVPISIDEESDKVQAFLERHELGHYQTWLDPQKTIDQIMPADVVPATYVFD
GSGNLIGFLRGYLDWGDKEVQPYLEKLTAKYAHR

Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 22056; Mature: 22056

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTHLLSCLLVFSSLLIPAQAQVASNKVYSTGKAIEKPLIMSRFIEMQSARSVPEVMFT
CCHHHHHHHHHHHHHHHCCCHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
DTKGEQISLKQYKGKLVLVNLWATWCAPCIKEIPQMENIRQVNKNNNLVVVPISIDEESD
CCCCCEEEHHHHCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCHH
KVQAFLERHELGHYQTWLDPQKTIDQIMPADVVPATYVFDGSGNLIGFLRGYLDWGDKEV
HHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHH
QPYLEKLTAKYAHR
HHHHHHHHHHHCCC
>Mature Secondary Structure
MNKTHLLSCLLVFSSLLIPAQAQVASNKVYSTGKAIEKPLIMSRFIEMQSARSVPEVMFT
CCHHHHHHHHHHHHHHHCCCHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
DTKGEQISLKQYKGKLVLVNLWATWCAPCIKEIPQMENIRQVNKNNNLVVVPISIDEESD
CCCCCEEEHHHHCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCHH
KVQAFLERHELGHYQTWLDPQKTIDQIMPADVVPATYVFDGSGNLIGFLRGYLDWGDKEV
HHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHH
QPYLEKLTAKYAHR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA