Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622486

Identifier: 167622486

GI number: 167622486

Start: 657383

End: 657961

Strand: Reverse

Name: 167622486

Synonym: Shal_0546

Alternate gene names: NA

Gene position: 657961-657383 (Counterclockwise)

Preceding gene: 167622488

Following gene: 167622485

Centisome position: 12.59

GC content: 46.98

Gene sequence:

>579_bases
ATGAAATTATCCGCTTTGGATCAACCACTATACGATCACCTATATCGCGATATTCGAGAGTTTCGCTCAACTTTCGATCT
ACCGATTGAGGATAGCAATACACTGGATGATAAAGCCGATACACTGCACACATCCTTAGCTATCGAAGAACTTACTGAGC
TTGCTGAAGCCGACAGCCGTGTAGAACAGGCCGATGCCATCGTCGACTCTGTCTATGTATTGATGGGCCGTCTAGTACAT
TTGGGCGCAACCCAAGTTAGCGATAGACTCGAGATCAGCTACGTCATCGACCTGCTGCTACACGTAGCTAAGAACCGTGA
AATCGACTTTGTCACTTGCTGGGATGAAGTGCATTCTAGCAACATGAGCAAGGTATGCCGTAACGAGCAAGAGCTTGAAG
AGACCATCGCTTTCTATGCCAAGCAAGGTGTTGAGATTGTTGGCAGCACCAAGGGCGACTTCATCATCGCCAAGTGCGCT
AAAGACGTCGATATGGCGGGTAAAGTGGTTCGCCAAGGTAAAGTATTAAAATCCGTTTACTACCGCCCAGCGGATCTAGA
AAAGCTAGTTAAAGCTTAA

Upstream 100 bases:

>100_bases
AAGATTGCTACGCATCAAGCAGCGGTTGGCTTTCATTTATAGCTTCAGTTCTTTAGTATGGCGGCTCTTAACCCTATTTT
GCAGCAAAGGCACAATTGAG

Downstream 100 bases:

>100_bases
ACTTTTATCTCCTGATCAAAAGTGTCCGCTTTTAAGCAAAAGTCAGCAGAGCCAAAGGCTCTGCTGACTTATAAGATACC
TTCTAACTGGCTTCTCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKLSALDQPLYDHLYRDIREFRSTFDLPIEDSNTLDDKADTLHTSLAIEELTELAEADSRVEQADAIVDSVYVLMGRLVH
LGATQVSDRLEISYVIDLLLHVAKNREIDFVTCWDEVHSSNMSKVCRNEQELEETIAFYAKQGVEIVGSTKGDFIIAKCA
KDVDMAGKVVRQGKVLKSVYYRPADLEKLVKA

Sequences:

>Translated_192_residues
MKLSALDQPLYDHLYRDIREFRSTFDLPIEDSNTLDDKADTLHTSLAIEELTELAEADSRVEQADAIVDSVYVLMGRLVH
LGATQVSDRLEISYVIDLLLHVAKNREIDFVTCWDEVHSSNMSKVCRNEQELEETIAFYAKQGVEIVGSTKGDFIIAKCA
KDVDMAGKVVRQGKVLKSVYYRPADLEKLVKA
>Mature_192_residues
MKLSALDQPLYDHLYRDIREFRSTFDLPIEDSNTLDDKADTLHTSLAIEELTELAEADSRVEQADAIVDSVYVLMGRLVH
LGATQVSDRLEISYVIDLLLHVAKNREIDFVTCWDEVHSSNMSKVCRNEQELEETIAFYAKQGVEIVGSTKGDFIIAKCA
KDVDMAGKVVRQGKVLKSVYYRPADLEKLVKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21683; Mature: 21683

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSALDQPLYDHLYRDIREFRSTFDLPIEDSNTLDDKADTLHTSLAIEELTELAEADSR
CCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VEQADAIVDSVYVLMGRLVHLGATQVSDRLEISYVIDLLLHVAKNREIDFVTCWDEVHSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHCC
NMSKVCRNEQELEETIAFYAKQGVEIVGSTKGDFIIAKCAKDVDMAGKVVRQGKVLKSVY
CHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
YRPADLEKLVKA
CCCCCHHHHHCC
>Mature Secondary Structure
MKLSALDQPLYDHLYRDIREFRSTFDLPIEDSNTLDDKADTLHTSLAIEELTELAEADSR
CCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VEQADAIVDSVYVLMGRLVHLGATQVSDRLEISYVIDLLLHVAKNREIDFVTCWDEVHSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHCC
NMSKVCRNEQELEETIAFYAKQGVEIVGSTKGDFIIAKCAKDVDMAGKVVRQGKVLKSVY
CHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH
YRPADLEKLVKA
CCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA