Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622312

Identifier: 167622312

GI number: 167622312

Start: 437167

End: 439602

Strand: Reverse

Name: 167622312

Synonym: Shal_0372

Alternate gene names: NA

Gene position: 439602-437167 (Counterclockwise)

Preceding gene: 167622313

Following gene: 167622311

Centisome position: 8.41

GC content: 50.7

Gene sequence:

>2436_bases
ATGAAGCCGAGCTTGAATCAATTTCTAAGCCATAAGACCGCCAAGTTAAGACTACTCATTTGGCTAACCCTAATCGCTAT
TACCTTAGCGACAGGTCTTGTGTTGTGGCAAGGCGGCGCTCGGGTACAAAGCGATATTCTCGCCATGCTCCCCAAGGTGA
GTGAGAGCCCGATGACCCAGCGAGCGATGGCGCAGGTCGAACAGCAGTTAGCGAACCGAATTTACTTAGGCTTCATTAGC
GATAACGAGCAGTCGGCAATTGATGCGGCCAAGACCGCAATGGCTAAGCTTAAACAGCCCTCGAAAGACGGGACTCAAGT
AAGTCATCGGGAAAGTGCCTTTATCGATATTAGCAGCGCGGATATGGCGCAGGCCGAAGCGCTAAACCGTTATTACTTTA
ATCATAGATTTCAGCTACTCACCGATGAGCAGCAGCAACTGCTTGAGCGGGGACAGTGGCAGCAACTCACGCAAGCCACC
CTCGAAAAGCTCTATAACGCCTTTAGTTATGCTAACAGCGACTTGCTGAGTCATGATCCACTGCTGCTCTACCCTGACAA
TCTGATCGCACTGGCGCCATCGCAGCAGCTTAGCGTTAAGCAGGGAGTACTGCTCAAGACTATCGCCCCAAAAGTGCTAA
ACCAGAGTCCCCAATTTGCCGCCATTGTAATGGCTAAAGGCCGTGATAGCGCCTTTAACCCTAACGCACAACAGCTACAA
CTATCAGCACTGACAGCGGCATTCGATGCGGTAAAGCAGCAAGACAGCGATATTGAAATCATCAAGGCAGGCGCATTATT
TCATGCAACGGCGGCAACCGATAACGCCAAGAAAGAGGTCTCGACTATCGGCCTTATCTCACTGCTGGGTGTTATCGCCT
TAGTCTGGTTCGCGTTTCGCTCCTTTAGGCCGCTGACTATCGCCTTGGTTACCGTCAGCAGCAGCTTCCTATTTGCAGTG
GTAACAACAACGGCAGTATTTGGAGAGCTACACCTACTGACGCTGGTATTTGGAACTAGCCTTATCGGGATCTCGATTGA
CTACTGTTTTCATTACTACTGTGAGCGCTTAAATCACCCGAGTCATAGTAGCGACCGGGTTATTCAACAGATTTTTATCG
CAATATCACTGGCGCTACTGACCAGCGTTATCGCCTACAGTGCCATAGGCCTCGCCCCCTTCCCAGGGATGCAGCAGGTC
GCGATATTCTGCGCCTCAGGCTTAGTCGGTGCCTACTTAACTTTGCTACTGGCCTACCCAACTCTTGCCGCCAGACCACT
GCGAGATGGGAATCGGGCCCTAGATTACGCCAGTCGCTACCAAGGTTTTATGCTTAGCCTAATGCCAACAGTGCCTCGTA
AGCGCCTACTGCTTGCGGTTGGAACCTGCATGTTTATCATCATAGGTTTTACCCAGCTGACCGCTAATGACGATATCCGC
CAGCTACAGCATACACCTGCAGATATTCAAGCCGAGGAAGATGAGCTGCGCACCCTGCTCAGTGGCGGCACCGACAATCA
ATTTCTACTGGTAACGGCTGATAGCGAACAGCAAGTCACCGATGAGCTCGCTCAACTGGAGCCGCTCCTCAAGCAAGCGA
AGCAAGATAACTTAATAGGTAACCATCTAAGCCTAAGCCGCTTTCTGCCAAGTCAGTCAGCGCAGGAGCGCCACTACCAA
CTACAGGGGCAGATCTATCGAGAGTACTTAGATGAGATCCTTGCCCGCTTAGGCTTAGATCCCAGCATTAAAGGCGCGCT
TGTAGAGCAATACCAAGCGGCAAAGGGGAACTTCATCACTGCCGATAACTTGTTAAATCATGCTGCGGGCGAAAGTTTTA
AGCCGTTATGGTTATCGCCACAGGAGGGTGAGACAGGTTACGGCGCTATCGTGCTGCTTGGCGGGATCACACAGTTAGAG
GCGCTGACTCAACACTTTGATGCCCTGCCTCATGTTGAGTTGGTTGATAAAGTCGGTGATATCTCAACAGTCATGGGCCA
CTATCGGCAGATTACCTTAGGATTGTTAGCACTAGCGCTACTTATCGCCGGGATCATCTTCACCTTTAGATTTGGCGTGA
GACTCGCAGCTGTGGTCGTCGCAGTTCCAGCCCTGTCGGCCCTACTGACTTTAGCCTGCTTAGGCGTCAGCAATAATCCA
CTAACCCTATTTCATGCACTGGCACTGATCTTAGTCTTCGGCATCGGCATCGACTACAGCCTATTTTTTGCCGAGTCGAA
GCAGCAGACTCGCGGGGTGATGATGGCAGTGTTTATGTCAGCCATGTCGACCCTATTGGCCTTTGGCTTACTAGCCTTCA
GCCAAACACCAGCAATTAATGCGTTCGGCCTAACCCTATTGCTGGGTATTGGTTTTACCTTCTTGCTCTCCCCTTTTATC
CAAATTTTTACAAGGAAGTCTAATGATGTCGACTGA

Upstream 100 bases:

>100_bases
AAAGCCCATTAACGGCAGCGGACAAGCAGCGCTTTAGCCCCGCTTCGTTATCAGATCCATCGGTTAATAACGCCCCCAAT
ATCGAGGGCAAATAGCCATA

Downstream 100 bases:

>100_bases
TCAAGCTGTTCAGGATGAATTGGAACGATACCCAACCGAAGCGGTCGATATTGCCATTATTGGCGCGGGACCATCGGGTA
GTATTGCCGCTAGCTTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 811; Mature: 811

Protein sequence:

>811_residues
MKPSLNQFLSHKTAKLRLLIWLTLIAITLATGLVLWQGGARVQSDILAMLPKVSESPMTQRAMAQVEQQLANRIYLGFIS
DNEQSAIDAAKTAMAKLKQPSKDGTQVSHRESAFIDISSADMAQAEALNRYYFNHRFQLLTDEQQQLLERGQWQQLTQAT
LEKLYNAFSYANSDLLSHDPLLLYPDNLIALAPSQQLSVKQGVLLKTIAPKVLNQSPQFAAIVMAKGRDSAFNPNAQQLQ
LSALTAAFDAVKQQDSDIEIIKAGALFHATAATDNAKKEVSTIGLISLLGVIALVWFAFRSFRPLTIALVTVSSSFLFAV
VTTTAVFGELHLLTLVFGTSLIGISIDYCFHYYCERLNHPSHSSDRVIQQIFIAISLALLTSVIAYSAIGLAPFPGMQQV
AIFCASGLVGAYLTLLLAYPTLAARPLRDGNRALDYASRYQGFMLSLMPTVPRKRLLLAVGTCMFIIIGFTQLTANDDIR
QLQHTPADIQAEEDELRTLLSGGTDNQFLLVTADSEQQVTDELAQLEPLLKQAKQDNLIGNHLSLSRFLPSQSAQERHYQ
LQGQIYREYLDEILARLGLDPSIKGALVEQYQAAKGNFITADNLLNHAAGESFKPLWLSPQEGETGYGAIVLLGGITQLE
ALTQHFDALPHVELVDKVGDISTVMGHYRQITLGLLALALLIAGIIFTFRFGVRLAAVVVAVPALSALLTLACLGVSNNP
LTLFHALALILVFGIGIDYSLFFAESKQQTRGVMMAVFMSAMSTLLAFGLLAFSQTPAINAFGLTLLLGIGFTFLLSPFI
QIFTRKSNDVD

Sequences:

>Translated_811_residues
MKPSLNQFLSHKTAKLRLLIWLTLIAITLATGLVLWQGGARVQSDILAMLPKVSESPMTQRAMAQVEQQLANRIYLGFIS
DNEQSAIDAAKTAMAKLKQPSKDGTQVSHRESAFIDISSADMAQAEALNRYYFNHRFQLLTDEQQQLLERGQWQQLTQAT
LEKLYNAFSYANSDLLSHDPLLLYPDNLIALAPSQQLSVKQGVLLKTIAPKVLNQSPQFAAIVMAKGRDSAFNPNAQQLQ
LSALTAAFDAVKQQDSDIEIIKAGALFHATAATDNAKKEVSTIGLISLLGVIALVWFAFRSFRPLTIALVTVSSSFLFAV
VTTTAVFGELHLLTLVFGTSLIGISIDYCFHYYCERLNHPSHSSDRVIQQIFIAISLALLTSVIAYSAIGLAPFPGMQQV
AIFCASGLVGAYLTLLLAYPTLAARPLRDGNRALDYASRYQGFMLSLMPTVPRKRLLLAVGTCMFIIIGFTQLTANDDIR
QLQHTPADIQAEEDELRTLLSGGTDNQFLLVTADSEQQVTDELAQLEPLLKQAKQDNLIGNHLSLSRFLPSQSAQERHYQ
LQGQIYREYLDEILARLGLDPSIKGALVEQYQAAKGNFITADNLLNHAAGESFKPLWLSPQEGETGYGAIVLLGGITQLE
ALTQHFDALPHVELVDKVGDISTVMGHYRQITLGLLALALLIAGIIFTFRFGVRLAAVVVAVPALSALLTLACLGVSNNP
LTLFHALALILVFGIGIDYSLFFAESKQQTRGVMMAVFMSAMSTLLAFGLLAFSQTPAINAFGLTLLLGIGFTFLLSPFI
QIFTRKSNDVD
>Mature_811_residues
MKPSLNQFLSHKTAKLRLLIWLTLIAITLATGLVLWQGGARVQSDILAMLPKVSESPMTQRAMAQVEQQLANRIYLGFIS
DNEQSAIDAAKTAMAKLKQPSKDGTQVSHRESAFIDISSADMAQAEALNRYYFNHRFQLLTDEQQQLLERGQWQQLTQAT
LEKLYNAFSYANSDLLSHDPLLLYPDNLIALAPSQQLSVKQGVLLKTIAPKVLNQSPQFAAIVMAKGRDSAFNPNAQQLQ
LSALTAAFDAVKQQDSDIEIIKAGALFHATAATDNAKKEVSTIGLISLLGVIALVWFAFRSFRPLTIALVTVSSSFLFAV
VTTTAVFGELHLLTLVFGTSLIGISIDYCFHYYCERLNHPSHSSDRVIQQIFIAISLALLTSVIAYSAIGLAPFPGMQQV
AIFCASGLVGAYLTLLLAYPTLAARPLRDGNRALDYASRYQGFMLSLMPTVPRKRLLLAVGTCMFIIIGFTQLTANDDIR
QLQHTPADIQAEEDELRTLLSGGTDNQFLLVTADSEQQVTDELAQLEPLLKQAKQDNLIGNHLSLSRFLPSQSAQERHYQ
LQGQIYREYLDEILARLGLDPSIKGALVEQYQAAKGNFITADNLLNHAAGESFKPLWLSPQEGETGYGAIVLLGGITQLE
ALTQHFDALPHVELVDKVGDISTVMGHYRQITLGLLALALLIAGIIFTFRFGVRLAAVVVAVPALSALLTLACLGVSNNP
LTLFHALALILVFGIGIDYSLFFAESKQQTRGVMMAVFMSAMSTLLAFGLLAFSQTPAINAFGLTLLLGIGFTFLLSPFI
QIFTRKSNDVD

Specific function: Unknown

COG id: COG4258

COG function: function code R; Predicted exporter

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88702; Mature: 88702

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSLNQFLSHKTAKLRLLIWLTLIAITLATGLVLWQGGARVQSDILAMLPKVSESPMTQ
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH
RAMAQVEQQLANRIYLGFISDNEQSAIDAAKTAMAKLKQPSKDGTQVSHRESAFIDISSA
HHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCH
DMAQAEALNRYYFNHRFQLLTDEQQQLLERGQWQQLTQATLEKLYNAFSYANSDLLSHDP
HHHHHHHHHHHHHHCHHEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LLLYPDNLIALAPSQQLSVKQGVLLKTIAPKVLNQSPQFAAIVMAKGRDSAFNPNAQQLQ
EEEECCCEEEECCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHH
LSALTAAFDAVKQQDSDIEIIKAGALFHATAATDNAKKEVSTIGLISLLGVIALVWFAFR
HHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SFRPLTIALVTVSSSFLFAVVTTTAVFGELHLLTLVFGTSLIGISIDYCFHYYCERLNHP
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SHSSDRVIQQIFIAISLALLTSVIAYSAIGLAPFPGMQQVAIFCASGLVGAYLTLLLAYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLAARPLRDGNRALDYASRYQGFMLSLMPTVPRKRLLLAVGTCMFIIIGFTQLTANDDIR
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QLQHTPADIQAEEDELRTLLSGGTDNQFLLVTADSEQQVTDELAQLEPLLKQAKQDNLIG
HHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
NHLSLSRFLPSQSAQERHYQLQGQIYREYLDEILARLGLDPSIKGALVEQYQAAKGNFIT
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEE
ADNLLNHAAGESFKPLWLSPQEGETGYGAIVLLGGITQLEALTQHFDALPHVELVDKVGD
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHH
ISTVMGHYRQITLGLLALALLIAGIIFTFRFGVRLAAVVVAVPALSALLTLACLGVSNNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LTLFHALALILVFGIGIDYSLFFAESKQQTRGVMMAVFMSAMSTLLAFGLLAFSQTPAIN
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AFGLTLLLGIGFTFLLSPFIQIFTRKSNDVD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKPSLNQFLSHKTAKLRLLIWLTLIAITLATGLVLWQGGARVQSDILAMLPKVSESPMTQ
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH
RAMAQVEQQLANRIYLGFISDNEQSAIDAAKTAMAKLKQPSKDGTQVSHRESAFIDISSA
HHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCH
DMAQAEALNRYYFNHRFQLLTDEQQQLLERGQWQQLTQATLEKLYNAFSYANSDLLSHDP
HHHHHHHHHHHHHHCHHEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LLLYPDNLIALAPSQQLSVKQGVLLKTIAPKVLNQSPQFAAIVMAKGRDSAFNPNAQQLQ
EEEECCCEEEECCCCHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHH
LSALTAAFDAVKQQDSDIEIIKAGALFHATAATDNAKKEVSTIGLISLLGVIALVWFAFR
HHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SFRPLTIALVTVSSSFLFAVVTTTAVFGELHLLTLVFGTSLIGISIDYCFHYYCERLNHP
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SHSSDRVIQQIFIAISLALLTSVIAYSAIGLAPFPGMQQVAIFCASGLVGAYLTLLLAYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLAARPLRDGNRALDYASRYQGFMLSLMPTVPRKRLLLAVGTCMFIIIGFTQLTANDDIR
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QLQHTPADIQAEEDELRTLLSGGTDNQFLLVTADSEQQVTDELAQLEPLLKQAKQDNLIG
HHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
NHLSLSRFLPSQSAQERHYQLQGQIYREYLDEILARLGLDPSIKGALVEQYQAAKGNFIT
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEE
ADNLLNHAAGESFKPLWLSPQEGETGYGAIVLLGGITQLEALTQHFDALPHVELVDKVGD
HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHH
ISTVMGHYRQITLGLLALALLIAGIIFTFRFGVRLAAVVVAVPALSALLTLACLGVSNNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LTLFHALALILVFGIGIDYSLFFAESKQQTRGVMMAVFMSAMSTLLAFGLLAFSQTPAIN
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AFGLTLLLGIGFTFLLSPFIQIFTRKSNDVD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA