Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622311

Identifier: 167622311

GI number: 167622311

Start: 435873

End: 437180

Strand: Reverse

Name: 167622311

Synonym: Shal_0371

Alternate gene names: NA

Gene position: 437180-435873 (Counterclockwise)

Preceding gene: 167622312

Following gene: 167622310

Centisome position: 8.36

GC content: 48.55

Gene sequence:

>1308_bases
ATGATGTCGACTGATCAAGCTGTTCAGGATGAATTGGAACGATACCCAACCGAAGCGGTCGATATTGCCATTATTGGCGC
GGGACCATCGGGTAGTATTGCCGCTAGCTTGCTACACGCTCAAGGTAAGAAAGTATTAGTGTTAGAGAAACAGCATTTTC
CGCGCTTCTCTATCGGTGAGAGCCTGCTGCCTTGCTGCATGCAAGTTATCGATGAAGCCAATATGCTTGAAGCGGTCAAT
CAAGCAGGATTCCAGTTTAAAAACGGCGCCGCTTTTCGCCACCAAGATAAATACACCAGCTTCGATTTTACCGATAAGTT
CACCCAAGGCCCCGGCACGACCTTTCAGGTAGAGCGCGCTAATTTCGATAAACTGCTAGCCGATGAAGCTGTCAGTCAAG
GTGTGGAGATCCGTTACGGTCACACGGTCGAGTCGATAGATTTAAGCGCCGAGCCAAGCCTTAGTGTGAGCAACGGTAAG
GGCCAGACCCAAACCATCAATGCCAAGTTTGTGCTCGATGCCAGTGGCTTTGGCCGTGTGCTACCAAGACTGTTGGACTT
AGAAAAGCCGTCTACCTTACCGACTCGTAGCGCCGTGTTTAACCATATTCACGACAACATCTCAGACCCTAACTTTGACC
GCAATAAGATTTTGATCAGTGTCCATCCCGATAACCAAGATATCTGGTATTGGCTCATTCCTTTCAGCGATGGCCGCTGC
TCGGTCGGCGTTGTGGGAGAGCCTGAACAACTCAGCTCTCTAAGCGGTTACGCAAGTAATGGCTTTAGCGATGAGATCGG
CAATAGTGACTTAGATAAAATTCTTAAGACCATGATTAACCAAGAGCCGGGATTAAGAGCGTTACTCGCAGATGCAGAGC
TGATTAATGAATCGGGCCTACTCAAAGGCTACTCGGCCAATGTGAAGACACTAGCAACCGATAAGTTTGCCCTGCTGGGT
AATGCTGGCGAGTTTCTCGATCCGGTATTTTCATCGGGGGTAACCATAGCGATGCAGTCAGCCTCCATGGCGGCAAAAAC
AGTAATAAGACAGCTCGATGGAGAGCGGGTCGATTGGCAGCAGGACTATGCAGAGCCATTGATGAAAGGGGTCGATACTT
TCAGAACCTATGTCGAAGCTTGGTACGATTACAGCTTCCAAGAAGCGATCTTCTTCGATAAGCCCGATCCGAAAATCAAG
CAGATGATCTGCTCAATTCTTGCTGGATATGCTTGGGATGACAACAATCCTTTCGTTAGCGAATCGAAGCGCCGACTCAA
TATGGTTGTAGAGCTATGTCGAAGTTAA

Upstream 100 bases:

>100_bases
CAAACACCAGCAATTAATGCGTTCGGCCTAACCCTATTGCTGGGTATTGGTTTTACCTTCTTGCTCTCCCCTTTTATCCA
AATTTTTACAAGGAAGTCTA

Downstream 100 bases:

>100_bases
GTAGAAGATTAGCCTTTGTGGGCCTTTGCCTATTAATCACAGCCTGTAGCCAGACCCTGCAGCGTCAAACCTGTGTCGAA
TTGGCAGCAGATGTGAGCTA

Product: tryptophan halogenase

Products: NA

Alternate protein names: Halogenase; FAD Dependent Oxidoreductase; Oxidoreductase Protein; Oxidoreductase; Dehydrogenase; FADH2 Dependent Halogenase; Pyridine Nucleotide-Disulfide Oxidoreductase; Alkylhalidase PltA; Dehyrogenase; Oxidoreductase Transmembrane Protein; LOW QUALITY PROTEIN Dehydrogenase; Monooxygenase; Dehydrogenases; Halogenase Protein; Flavoprotein/Dehydrogenase; Dehydrogenase/Oxidoreductase; Halogenase A; FAD Oxidoreductase; Hydroxylase; Alkylhalidase CmlS; Alkylhalidase; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MMSTDQAVQDELERYPTEAVDIAIIGAGPSGSIAASLLHAQGKKVLVLEKQHFPRFSIGESLLPCCMQVIDEANMLEAVN
QAGFQFKNGAAFRHQDKYTSFDFTDKFTQGPGTTFQVERANFDKLLADEAVSQGVEIRYGHTVESIDLSAEPSLSVSNGK
GQTQTINAKFVLDASGFGRVLPRLLDLEKPSTLPTRSAVFNHIHDNISDPNFDRNKILISVHPDNQDIWYWLIPFSDGRC
SVGVVGEPEQLSSLSGYASNGFSDEIGNSDLDKILKTMINQEPGLRALLADAELINESGLLKGYSANVKTLATDKFALLG
NAGEFLDPVFSSGVTIAMQSASMAAKTVIRQLDGERVDWQQDYAEPLMKGVDTFRTYVEAWYDYSFQEAIFFDKPDPKIK
QMICSILAGYAWDDNNPFVSESKRRLNMVVELCRS

Sequences:

>Translated_435_residues
MMSTDQAVQDELERYPTEAVDIAIIGAGPSGSIAASLLHAQGKKVLVLEKQHFPRFSIGESLLPCCMQVIDEANMLEAVN
QAGFQFKNGAAFRHQDKYTSFDFTDKFTQGPGTTFQVERANFDKLLADEAVSQGVEIRYGHTVESIDLSAEPSLSVSNGK
GQTQTINAKFVLDASGFGRVLPRLLDLEKPSTLPTRSAVFNHIHDNISDPNFDRNKILISVHPDNQDIWYWLIPFSDGRC
SVGVVGEPEQLSSLSGYASNGFSDEIGNSDLDKILKTMINQEPGLRALLADAELINESGLLKGYSANVKTLATDKFALLG
NAGEFLDPVFSSGVTIAMQSASMAAKTVIRQLDGERVDWQQDYAEPLMKGVDTFRTYVEAWYDYSFQEAIFFDKPDPKIK
QMICSILAGYAWDDNNPFVSESKRRLNMVVELCRS
>Mature_435_residues
MMSTDQAVQDELERYPTEAVDIAIIGAGPSGSIAASLLHAQGKKVLVLEKQHFPRFSIGESLLPCCMQVIDEANMLEAVN
QAGFQFKNGAAFRHQDKYTSFDFTDKFTQGPGTTFQVERANFDKLLADEAVSQGVEIRYGHTVESIDLSAEPSLSVSNGK
GQTQTINAKFVLDASGFGRVLPRLLDLEKPSTLPTRSAVFNHIHDNISDPNFDRNKILISVHPDNQDIWYWLIPFSDGRC
SVGVVGEPEQLSSLSGYASNGFSDEIGNSDLDKILKTMINQEPGLRALLADAELINESGLLKGYSANVKTLATDKFALLG
NAGEFLDPVFSSGVTIAMQSASMAAKTVIRQLDGERVDWQQDYAEPLMKGVDTFRTYVEAWYDYSFQEAIFFDKPDPKIK
QMICSILAGYAWDDNNPFVSESKRRLNMVVELCRS

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48072; Mature: 48072

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSTDQAVQDELERYPTEAVDIAIIGAGPSGSIAASLLHAQGKKVLVLEKQHFPRFSIGE
CCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCH
SLLPCCMQVIDEANMLEAVNQAGFQFKNGAAFRHQDKYTSFDFTDKFTQGPGTTFQVERA
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECC
NFDKLLADEAVSQGVEIRYGHTVESIDLSAEPSLSVSNGKGQTQTINAKFVLDASGFGRV
CHHHHHHHHHHHCCCEEEECCEEEEECCCCCCCEEECCCCCCEEEEEEEEEEECCCHHHH
LPRLLDLEKPSTLPTRSAVFNHIHDNISDPNFDRNKILISVHPDNQDIWYWLIPFSDGRC
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCE
SVGVVGEPEQLSSLSGYASNGFSDEIGNSDLDKILKTMINQEPGLRALLADAELINESGL
EEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
LKGYSANVKTLATDKFALLGNAGEFLDPVFSSGVTIAMQSASMAAKTVIRQLDGERVDWQ
CCCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCHH
QDYAEPLMKGVDTFRTYVEAWYDYSFQEAIFFDKPDPKIKQMICSILAGYAWDDNNPFVS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHH
ESKRRLNMVVELCRS
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MMSTDQAVQDELERYPTEAVDIAIIGAGPSGSIAASLLHAQGKKVLVLEKQHFPRFSIGE
CCCCCHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCH
SLLPCCMQVIDEANMLEAVNQAGFQFKNGAAFRHQDKYTSFDFTDKFTQGPGTTFQVERA
HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECC
NFDKLLADEAVSQGVEIRYGHTVESIDLSAEPSLSVSNGKGQTQTINAKFVLDASGFGRV
CHHHHHHHHHHHCCCEEEECCEEEEECCCCCCCEEECCCCCCEEEEEEEEEEECCCHHHH
LPRLLDLEKPSTLPTRSAVFNHIHDNISDPNFDRNKILISVHPDNQDIWYWLIPFSDGRC
HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCE
SVGVVGEPEQLSSLSGYASNGFSDEIGNSDLDKILKTMINQEPGLRALLADAELINESGL
EEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
LKGYSANVKTLATDKFALLGNAGEFLDPVFSSGVTIAMQSASMAAKTVIRQLDGERVDWQ
CCCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCCCCHH
QDYAEPLMKGVDTFRTYVEAWYDYSFQEAIFFDKPDPKIKQMICSILAGYAWDDNNPFVS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHH
ESKRRLNMVVELCRS
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA