Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is frlD [H]

Identifier: 167622058

GI number: 167622058

Start: 133910

End: 134752

Strand: Direct

Name: frlD [H]

Synonym: Shal_0117

Alternate gene names: 167622058

Gene position: 133910-134752 (Clockwise)

Preceding gene: 167622057

Following gene: 167622059

Centisome position: 2.56

GC content: 51.72

Gene sequence:

>843_bases
ATGGCGAATATATTATTGGTAGCAAACCTCAATTGTGATCGTATTTTTTTGCTTAACCATCCCATTAAAACCGGTGGTCG
ATTTCATTATAAAGATGGTGGTCAGCGCTTAGGTGGCGGCGGTGCCAATACGGGTATTGGCCTCGTCTGGGCCGGGCATC
AGGTATCACTGGTCACAGAGGTAGGCCGCGATGATGTGGGAGACTGGTTACTCGCCGAGGCCAGCACTCAAGGAATTAAT
TGCAGCCTGATCCAGCGCCGTGCAGGTAGTACTGGTGAGATGCTGTTGATGATGACGCCGGACGGTGAGCGAACCATCAT
CAGACCCGAGCGACCCAAGTTCGAACTGCCGTTGCCGCCAAACTGGCAAAATGTCGATGTCCTCTATATCAACTCTTCAA
GCGAGGGGGCTGCCAGTTGGGCTAAGACTGCTATGCCGTATTGCTGGGTGGTCGCTCAGCTAGCAAAAGATCAACGGGCA
CGACCCTGTCATGTACTTATTGCTTCACTGAGTGATATGCAAGGCCGCTGTGAAGGCGACCCATGGGAGTTTGCAAAATC
GATATCAGGGAATGATCTAAAGTACTTTGTGGTTACCGACGGTGAAAACGGGGCGATGCTATATAGCGCAGCAGAGTCTG
TACTGGTCGCGGCGGTACCCAGTCAAGTTGTAGATACCACAGGGGCGGGGGACGCCTATGCGGCTGGGCTTATTCACGCC
TTAGTTAGTCAAAAAGAGATCGTCGCAGCAATGCAGGAAGCAGCCATTTGGTCTGGTTTTGCGGTGGCCTGTAATAGCTC
AATTCCAGGTAAGGGTTTGAAACACTATTTAACGGCGGAGTAG

Upstream 100 bases:

>100_bases
GCTCACCCTTTTTGTTTAAGCATTGGAAACTAAAGCCTGACTTGGCACCTCTGTCGAAATCTCTTACTATCAAGTTAATA
GTCATTCTTATCGAGCTGTC

Downstream 100 bases:

>100_bases
CGGTGCTATTGGAGCTGTCTCATATTTGTATTGCTCCGCTCTACTGCTCAGCAAGCTGACCGAAAACCCCCATTTTATAA
CTCTAATGCCCTGTTGTTCC

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTEVGRDDVGDWLLAEASTQGIN
CSLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPPNWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRA
RPCHVLIASLSDMQGRCEGDPWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHA
LVSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE

Sequences:

>Translated_280_residues
MANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTEVGRDDVGDWLLAEASTQGIN
CSLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPPNWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRA
RPCHVLIASLSDMQGRCEGDPWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHA
LVSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE
>Mature_279_residues
ANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTEVGRDDVGDWLLAEASTQGINC
SLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPPNWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRAR
PCHVLIASLSDMQGRCEGDPWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHAL
VSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE

Specific function: Catalyzes the phosphorylation of a range of fructosamines to fructosamine 6-phosphates [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 29946; Mature: 29815

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTE
CCEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEC
VGRDDVGDWLLAEASTQGINCSLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPP
CCCCCCCCEEEEECCCCCCCEEEEHHCCCCCCCEEEEECCCCCEEEECCCCCCEECCCCC
NWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRARPCHVLIASLSDMQGRCEGD
CCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCC
PWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHA
HHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCHHHHCCCCCCHHHHHHHHHH
LVSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE
HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEECCC
>Mature Secondary Structure 
ANILLVANLNCDRIFLLNHPIKTGGRFHYKDGGQRLGGGGANTGIGLVWAGHQVSLVTE
CEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEEEC
VGRDDVGDWLLAEASTQGINCSLIQRRAGSTGEMLLMMTPDGERTIIRPERPKFELPLPP
CCCCCCCCEEEEECCCCCCCEEEEHHCCCCCCCEEEEECCCCCEEEECCCCCCEECCCCC
NWQNVDVLYINSSSEGAASWAKTAMPYCWVVAQLAKDQRARPCHVLIASLSDMQGRCEGD
CCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCC
PWEFAKSISGNDLKYFVVTDGENGAMLYSAAESVLVAAVPSQVVDTTGAGDAYAAGLIHA
HHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCHHHHCCCCCCHHHHHHHHHH
LVSQKEIVAAMQEAAIWSGFAVACNSSIPGKGLKHYLTAE
HHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]