Click here to switch to the map view.

The map label for this gene is smg

Identifier: 167621971

GI number: 167621971

Start: 34845

End: 35318

Strand: Direct

Name: smg

Synonym: Shal_0030

Alternate gene names: 167621971

Gene position: 34845-35318 (Clockwise)

Preceding gene: 167621970

Following gene: 167621973

Centisome position: 0.67

GC content: 41.35

Gene sequence:

>474_bases
ATGTTTGATATCCTCATGTATTTATTTGAAAACTATGTTCATAGTGAAGTCGAATTATTAGTAGATCAAGACGAACTCAC
AAAAGAACTCACTCGCGCCGGATTTCATCAAAGTGAAATCATTAAGGCACTTTCTTGGTTAGAGCGTTTAGCTGACATAC
AGGAAGCGGGCACGCCTTACCTCTGTAACCATGATCAGCAATCATTCCGTATTTACACCAAAGCTGAGATGGAAAAGATT
GACGTCGAAAGCCGTGGTTTTTTACTGTTTCTAGAGCAGATTAAAGTGCTTAGTGTTGAGACTCGTGAAATGGTGATCGA
CCGAGTCATGGAAATTGATGAACCGACCTTAAATCTTGATGATCTTAAGTGGGTTATCTTGATGGTGCTATTTAATGCTC
CGGGTCATGAGTCTGCCTATGAGCAGATGGAAGATCTTATCTTTGAGCAGCCAGATGGGCGCTTGCACTCATAG

Upstream 100 bases:

>100_bases
AAACCATAGAGTTAGTATTGGAGCAATTGCTTGAACTCGAGCTGCAGGGGTGGATTACTGCAGTCCCTGGTGGTTACATA
AGACTAAAGAGGAGCTAGCC

Downstream 100 bases:

>100_bases
TCTATAAAGAACCTAAAACAAAGGAGGCCTAAGCCTCCTTTTTTGTACATGGATGTATTTATCCCTGAACGCAAGGATTG
CGTAGGAAGGGATTTGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MFDILMYLFENYVHSEVELLVDQDELTKELTRAGFHQSEIIKALSWLERLADIQEAGTPYLCNHDQQSFRIYTKAEMEKI
DVESRGFLLFLEQIKVLSVETREMVIDRVMEIDEPTLNLDDLKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS

Sequences:

>Translated_157_residues
MFDILMYLFENYVHSEVELLVDQDELTKELTRAGFHQSEIIKALSWLERLADIQEAGTPYLCNHDQQSFRIYTKAEMEKI
DVESRGFLLFLEQIKVLSVETREMVIDRVMEIDEPTLNLDDLKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS
>Mature_157_residues
MFDILMYLFENYVHSEVELLVDQDELTKELTRAGFHQSEIIKALSWLERLADIQEAGTPYLCNHDQQSFRIYTKAEMEKI
DVESRGFLLFLEQIKVLSVETREMVIDRVMEIDEPTLNLDDLKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS

Specific function: Unknown

COG id: COG2922

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smg family

Homologues:

Organism=Escherichia coli, GI1789679, Length=157, Percent_Identity=60.5095541401274, Blast_Score=189, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SMG_SHEHH (B0TLD3)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001672265.1
- GeneID:   5905346
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_0030
- HOGENOM:   HBG518884
- OMA:   EMRVDQD
- ProtClustDB:   CLSK905556
- BioCyc:   SHAL458817:SHAL_0030-MONOMER
- HAMAP:   MF_00598
- InterPro:   IPR007456

Pfam domain/function: PF04361 DUF494

EC number: NA

Molecular weight: Translated: 18485; Mature: 18485

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDILMYLFENYVHSEVELLVDQDELTKELTRAGFHQSEIIKALSWLERLADIQEAGTPY
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
LCNHDQQSFRIYTKAEMEKIDVESRGFLLFLEQIKVLSVETREMVIDRVMEIDEPTLNLD
EECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DLKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFDILMYLFENYVHSEVELLVDQDELTKELTRAGFHQSEIIKALSWLERLADIQEAGTPY
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
LCNHDQQSFRIYTKAEMEKIDVESRGFLLFLEQIKVLSVETREMVIDRVMEIDEPTLNLD
EECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DLKWVILMVLFNAPGHESAYEQMEDLIFEQPDGRLHS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA