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The map label for this gene is smf [H]

Identifier: 167621970

GI number: 167621970

Start: 33823

End: 34842

Strand: Direct

Name: smf [H]

Synonym: Shal_0029

Alternate gene names: 167621970

Gene position: 33823-34842 (Clockwise)

Preceding gene: 167621969

Following gene: 167621971

Centisome position: 0.65

GC content: 46.96

Gene sequence:

>1020_bases
ATGGATGTAGCAGAGTTAAGGCAAAGGTTAGCGCATGAGCCACAAGCGCTGCCACTACCGGAATCGTTACTACAATCCAA
TTTATCCCCTGATTATGCGTTAGTTGATGCGGCGTTAACCTGGCAGCAAGCAGCAGATAACCATCATCTAGTGTGTCTAG
GAGATCCTCTCTATCCTCCGCTATTGAAACAGATAAATGATCCTCCCGCGGTACTGTTTTTAAAAGGTAACCTTGATGCT
TTATTGTTTCCAGGTATCGCTGTTGTCGGCAGCCGTAATGCGACCCTTGGTGGCAAAAAAGTGGCTTATGAGTTGGCTAT
CCAGTTGGCCTTACATAGTCTGGCGATAACTAGTGGCATGGCTTTAGGGATCGACGGTGCTGCGCATCAAGCGGCTATTG
ATATTGAGAAACCGAGTGTAGCGGTGCTGGGTACCGGTGCGGATGTTATTTACCCCAAGCGTCACCGATCTATTTATCAT
GATATTCAGAAAGATGGCTGCATATTGAGTGAATTTTGGCCTGACGTTAAGCCCTTTGCAGGAAATTTTCCGAAACGAAA
CCGTATTATCAGCGGTCTAACTATAGGGACCTTAGTGGTTGAAGCAAGCTTGAAAAGTGGCTCATTAATCACGGCACGAC
TGGCTAACGAACAGGGGCGAGAGGTGTTTGCAGTACCAGGGAGTGTGCTAAGTGGCCAAAGTGAGGGGAGTCATCAATTA
CTGCGTGATGGTGCTAAATTGGTGGAGTCCGTGGCTGATATTTTAGAAGAAGTTACCGCTTTATCGCAGTTTCACCTTGA
AGAACTAAGATCGCGTCACCATATAGGGGGGGAAAGCGCCTCTGATTTGCCATTTTCCTCGCTGTTAGCTAGTGTAGGCT
ATGAGACTACAACGATAAACGATGTGGTCGAGCATAGTGGAAAAACCATAGAGTTAGTATTGGAGCAATTGCTTGAACTC
GAGCTGCAGGGGTGGATTACTGCAGTCCCTGGTGGTTACATAAGACTAAAGAGGAGCTAG

Upstream 100 bases:

>100_bases
TTTTAAAGGATAAACCATTAACGATAAACTGGTCGATTGGCTAGTTGTTTCAGCTGTATCTGGGCTAGGACCCGCTCGGA
TTAAACAATTAATAAACTAC

Downstream 100 bases:

>100_bases
CCATGTTTGATATCCTCATGTATTTATTTGAAAACTATGTTCATAGTGAAGTCGAATTATTAGTAGATCAAGACGAACTC
ACAAAAGAACTCACTCGCGC

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MDVAELRQRLAHEPQALPLPESLLQSNLSPDYALVDAALTWQQAADNHHLVCLGDPLYPPLLKQINDPPAVLFLKGNLDA
LLFPGIAVVGSRNATLGGKKVAYELAIQLALHSLAITSGMALGIDGAAHQAAIDIEKPSVAVLGTGADVIYPKRHRSIYH
DIQKDGCILSEFWPDVKPFAGNFPKRNRIISGLTIGTLVVEASLKSGSLITARLANEQGREVFAVPGSVLSGQSEGSHQL
LRDGAKLVESVADILEEVTALSQFHLEELRSRHHIGGESASDLPFSSLLASVGYETTTINDVVEHSGKTIELVLEQLLEL
ELQGWITAVPGGYIRLKRS

Sequences:

>Translated_339_residues
MDVAELRQRLAHEPQALPLPESLLQSNLSPDYALVDAALTWQQAADNHHLVCLGDPLYPPLLKQINDPPAVLFLKGNLDA
LLFPGIAVVGSRNATLGGKKVAYELAIQLALHSLAITSGMALGIDGAAHQAAIDIEKPSVAVLGTGADVIYPKRHRSIYH
DIQKDGCILSEFWPDVKPFAGNFPKRNRIISGLTIGTLVVEASLKSGSLITARLANEQGREVFAVPGSVLSGQSEGSHQL
LRDGAKLVESVADILEEVTALSQFHLEELRSRHHIGGESASDLPFSSLLASVGYETTTINDVVEHSGKTIELVLEQLLEL
ELQGWITAVPGGYIRLKRS
>Mature_339_residues
MDVAELRQRLAHEPQALPLPESLLQSNLSPDYALVDAALTWQQAADNHHLVCLGDPLYPPLLKQINDPPAVLFLKGNLDA
LLFPGIAVVGSRNATLGGKKVAYELAIQLALHSLAITSGMALGIDGAAHQAAIDIEKPSVAVLGTGADVIYPKRHRSIYH
DIQKDGCILSEFWPDVKPFAGNFPKRNRIISGLTIGTLVVEASLKSGSLITARLANEQGREVFAVPGSVLSGQSEGSHQL
LRDGAKLVESVADILEEVTALSQFHLEELRSRHHIGGESASDLPFSSLLASVGYETTTINDVVEHSGKTIELVLEQLLEL
ELQGWITAVPGGYIRLKRS

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=320, Percent_Identity=45.625, Blast_Score=249, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 36451; Mature: 36451

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVAELRQRLAHEPQALPLPESLLQSNLSPDYALVDAALTWQQAADNHHLVCLGDPLYPP
CCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHH
LLKQINDPPAVLFLKGNLDALLFPGIAVVGSRNATLGGKKVAYELAIQLALHSLAITSGM
HHHHCCCCCEEEEEECCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ALGIDGAAHQAAIDIEKPSVAVLGTGADVIYPKRHRSIYHDIQKDGCILSEFWPDVKPFA
EECCCCCCCCEEEEECCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCC
GNFPKRNRIISGLTIGTLVVEASLKSGSLITARLANEQGREVFAVPGSVLSGQSEGSHQL
CCCCCCCCEECCEEEEHHEEEECCCCCCEEEEEECCCCCCEEEEECCHHHCCCCCCHHHH
LRDGAKLVESVADILEEVTALSQFHLEELRSRHHIGGESASDLPFSSLLASVGYETTTIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHH
DVVEHSGKTIELVLEQLLELELQGWITAVPGGYIRLKRS
HHHHCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEEECC
>Mature Secondary Structure
MDVAELRQRLAHEPQALPLPESLLQSNLSPDYALVDAALTWQQAADNHHLVCLGDPLYPP
CCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHH
LLKQINDPPAVLFLKGNLDALLFPGIAVVGSRNATLGGKKVAYELAIQLALHSLAITSGM
HHHHCCCCCEEEEEECCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ALGIDGAAHQAAIDIEKPSVAVLGTGADVIYPKRHRSIYHDIQKDGCILSEFWPDVKPFA
EECCCCCCCCEEEEECCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCHHHHCCCCCCCC
GNFPKRNRIISGLTIGTLVVEASLKSGSLITARLANEQGREVFAVPGSVLSGQSEGSHQL
CCCCCCCCEECCEEEEHHEEEECCCCCCEEEEEECCCCCCEEEEECCHHHCCCCCCHHHH
LRDGAKLVESVADILEEVTALSQFHLEELRSRHHIGGESASDLPFSSLLASVGYETTTIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHH
DVVEHSGKTIELVLEQLLELELQGWITAVPGGYIRLKRS
HHHHCCCCCHHHHHHHHHHHHHHCCEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8432722; 8112305; 9278503 [H]