| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752370
GI number: 16752370
Start: 87954
End: 88382
Strand: Direct
Name: Not Available
Synonym: CP0076
Alternate gene names: NA
Gene position: 87954-88382 (Clockwise)
Preceding gene: 16752367
Following gene: 16752373
Centisome position: 7.15
GC content: 40.09
Gene sequence:
>429_bases ATGAGTTTAGATTTTTTCGAGGAGTTCTATCATCAGTCAATACTCAATACAGGGACGTCCTTCCCCGAAGGATACTTAAA TATTGCAGAAATACTCTCTTATCCTCATTGCACTGATGCTAACACTGACTTTCTCTGTAGCCAGTCTGACAACGATTTTA TTATTGCAGAATCTAAAGATAAACTCACATTATTTAACGCTGATTTTGCTATTTGGCTCGTTCCTGAGCTTGTTCAAGGA CAGGCAGTCACTCGGGGATATATTGCGGTTTCCCAAGGAGAAGGAAACTATGAACCAGAAATGGCTTTCGAAGCCTCTGG ACAATACAATCAGTCGTCGCTGATTCTCGAAGCCCTGCAGTTATATCTTAAGGATATTAAAGATACTGAAAATGCTCTGC GTTCTTTCCGCTTTAATAACGATCACTAG
Upstream 100 bases:
>100_bases TTGATTGTTTATTACTTACGTTATTAGGAAATTCAACAGAATAGAAAGGACTTGACGGCTCTGAAAATAAAGAATTACCA TAAATCAGAGGAAATATACT
Downstream 100 bases:
>100_bases GTTTAGGAATGTTGGCCATTGAGCATTTTTAAATGCACAATATTGCAATGATCTTCACGAGCATAAAGAAACTCGTCCAC AGAACTTTTAGCCAGAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSLDFFEEFYHQSILNTGTSFPEGYLNIAEILSYPHCTDANTDFLCSQSDNDFIIAESKDKLTLFNADFAIWLVPELVQG QAVTRGYIAVSQGEGNYEPEMAFEASGQYNQSSLILEALQLYLKDIKDTENALRSFRFNNDH
Sequences:
>Translated_142_residues MSLDFFEEFYHQSILNTGTSFPEGYLNIAEILSYPHCTDANTDFLCSQSDNDFIIAESKDKLTLFNADFAIWLVPELVQG QAVTRGYIAVSQGEGNYEPEMAFEASGQYNQSSLILEALQLYLKDIKDTENALRSFRFNNDH >Mature_141_residues SLDFFEEFYHQSILNTGTSFPEGYLNIAEILSYPHCTDANTDFLCSQSDNDFIIAESKDKLTLFNADFAIWLVPELVQGQ AVTRGYIAVSQGEGNYEPEMAFEASGQYNQSSLILEALQLYLKDIKDTENALRSFRFNNDH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16128; Mature: 15997
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDFFEEFYHQSILNTGTSFPEGYLNIAEILSYPHCTDANTDFLCSQSDNDFIIAESKD CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCC KLTLFNADFAIWLVPELVQGQAVTRGYIAVSQGEGNYEPEMAFEASGQYNQSSLILEALQ CEEEEECCEEEEECHHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHH LYLKDIKDTENALRSFRFNNDH HHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLDFFEEFYHQSILNTGTSFPEGYLNIAEILSYPHCTDANTDFLCSQSDNDFIIAESKD CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCEEEEECCC KLTLFNADFAIWLVPELVQGQAVTRGYIAVSQGEGNYEPEMAFEASGQYNQSSLILEALQ CEEEEECCEEEEECHHHHCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHH LYLKDIKDTENALRSFRFNNDH HHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA