Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752373

GI number: 16752373

Start: 90527

End: 91411

Strand: Direct

Name: Not Available

Synonym: CP0080

Alternate gene names: NA

Gene position: 90527-91411 (Clockwise)

Preceding gene: 16752370

Following gene: 16752376

Centisome position: 7.36

GC content: 43.39

Gene sequence:

>885_bases
ATGAAGAAGTTAATTCTATATTTTGCTGCTTTTGTTGCTTCTCTTTTTTGTGGTGTTTTTTTGTGGGATCGAGTTCCTTG
TGCACAAAAAATTATGCGGCTTGCTGCTGACCATAGCTCAGAAGTATTTTCTAAGAGCTGCCGCTTTGTACGAAAAATCT
CAGGATTTGAAGAGTTACAAGTTTTTGAACGTCACGTCTCTCCAGAACAGGCGTTGGCATTGTTCCCAGAATATCGTGAT
GGCAAGTCTTTTGTAGAGCTCGCCTTCATCCCACATACCCTTATGCACGTACGCTTCTCTAAAGAAGAACCTGTCAAAAA
GCATATTATCAGCCAAGAGGGAGAAATCCTTTGGAGCTTAGTTAATGGTGAGATGGTATTGCATACAGGGACTTGGACAT
GCTCTAAGGGATTTCGAGAGTGCCTCCTTTTGCACGCTGGTAAGCAAGATATGCGGGTGATACAAACGCTAGCTACCTTA
GGGGGAACCACATCCCGGGAATCCTTAGCCCAAGCCTTAGCCCTAAAGAATATCCGTGCAGAGCGAGTAATTAAGGAATG
TCAGAAGAAAAAACTGATCTTTGCCTCCGGGAATCAAATAGGAACGCACTTCCAACAGTTCCAGCCTATCCGAGGGTGTA
CAACAACACTCAATAACAATCCTGTGTGGTTGCAAAAACCACGTCACGCAGCCGTGTTCCCTGCGCAGTATTCCGAAGAT
CGTGTGCGTCATTTAGTGAAGATGATCTTTGGAGATAATTTTTTAATTGTACGTAGCTCGATGGTCTATGTACCTGTCTA
TAAGATCTCCCTAGTTTCTGCAGATAATAGTGTCCGTGTTGAATACATCAACGCAGTCACGGGAAAATCTTTTCAAGATC
TATAG

Upstream 100 bases:

>100_bases
GAATTTGTCAAATGCCTTGTTTTTGTTTTATTTATAACTTGTTATTTTTTTTATTTGATAAAACATTTCTTTATTGTGTA
AAATACAAAAAAGGTACTTT

Downstream 100 bases:

>100_bases
ATAGATAGGCATGCCCTCATGTCTTTGAGAACTTCAAGCATGCAACCTAGCGTCTAGAAAATCTCAAACAGTAATTACAC
GCACAGGAAGGTCTGCAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKKLILYFAAFVASLFCGVFLWDRVPCAQKIMRLAADHSSEVFSKSCRFVRKISGFEELQVFERHVSPEQALALFPEYRD
GKSFVELAFIPHTLMHVRFSKEEPVKKHIISQEGEILWSLVNGEMVLHTGTWTCSKGFRECLLLHAGKQDMRVIQTLATL
GGTTSRESLAQALALKNIRAERVIKECQKKKLIFASGNQIGTHFQQFQPIRGCTTTLNNNPVWLQKPRHAAVFPAQYSED
RVRHLVKMIFGDNFLIVRSSMVYVPVYKISLVSADNSVRVEYINAVTGKSFQDL

Sequences:

>Translated_294_residues
MKKLILYFAAFVASLFCGVFLWDRVPCAQKIMRLAADHSSEVFSKSCRFVRKISGFEELQVFERHVSPEQALALFPEYRD
GKSFVELAFIPHTLMHVRFSKEEPVKKHIISQEGEILWSLVNGEMVLHTGTWTCSKGFRECLLLHAGKQDMRVIQTLATL
GGTTSRESLAQALALKNIRAERVIKECQKKKLIFASGNQIGTHFQQFQPIRGCTTTLNNNPVWLQKPRHAAVFPAQYSED
RVRHLVKMIFGDNFLIVRSSMVYVPVYKISLVSADNSVRVEYINAVTGKSFQDL
>Mature_294_residues
MKKLILYFAAFVASLFCGVFLWDRVPCAQKIMRLAADHSSEVFSKSCRFVRKISGFEELQVFERHVSPEQALALFPEYRD
GKSFVELAFIPHTLMHVRFSKEEPVKKHIISQEGEILWSLVNGEMVLHTGTWTCSKGFRECLLLHAGKQDMRVIQTLATL
GGTTSRESLAQALALKNIRAERVIKECQKKKLIFASGNQIGTHFQQFQPIRGCTTTLNNNPVWLQKPRHAAVFPAQYSED
RVRHLVKMIFGDNFLIVRSSMVYVPVYKISLVSADNSVRVEYINAVTGKSFQDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33485; Mature: 33485

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLILYFAAFVASLFCGVFLWDRVPCAQKIMRLAADHSSEVFSKSCRFVRKISGFEELQ
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
VFERHVSPEQALALFPEYRDGKSFVELAFIPHTLMHVRFSKEEPVKKHIISQEGEILWSL
HHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCEEEEE
VNGEMVLHTGTWTCSKGFRECLLLHAGKQDMRVIQTLATLGGTTSRESLAQALALKNIRA
ECCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ERVIKECQKKKLIFASGNQIGTHFQQFQPIRGCTTTLNNNPVWLQKPRHAAVFPAQYSED
HHHHHHHHHCEEEEECCCHHHHHHHHCCCCCCCCEECCCCCEEEECCCCCEECCCCCCHH
RVRHLVKMIFGDNFLIVRSSMVYVPVYKISLVSADNSVRVEYINAVTGKSFQDL
HHHHHHHHHHCCCEEEEECCEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MKKLILYFAAFVASLFCGVFLWDRVPCAQKIMRLAADHSSEVFSKSCRFVRKISGFEELQ
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHH
VFERHVSPEQALALFPEYRDGKSFVELAFIPHTLMHVRFSKEEPVKKHIISQEGEILWSL
HHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCEEEEE
VNGEMVLHTGTWTCSKGFRECLLLHAGKQDMRVIQTLATLGGTTSRESLAQALALKNIRA
ECCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ERVIKECQKKKLIFASGNQIGTHFQQFQPIRGCTTTLNNNPVWLQKPRHAAVFPAQYSED
HHHHHHHHHCEEEEECCCHHHHHHHHCCCCCCCCEECCCCCEEEECCCCCEECCCCCCHH
RVRHLVKMIFGDNFLIVRSSMVYVPVYKISLVSADNSVRVEYINAVTGKSFQDL
HHHHHHHHHHCCCEEEEECCEEEEEEEEEEEEECCCCEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA