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The map label for this gene is sufD [H]

Identifier: 167040941

GI number: 167040941

Start: 2371824

End: 2372873

Strand: Reverse

Name: sufD [H]

Synonym: Teth514_2330

Alternate gene names: 167040941

Gene position: 2372873-2371824 (Counterclockwise)

Preceding gene: 167040942

Following gene: 167040940

Centisome position: 96.57

GC content: 34.95

Gene sequence:

>1050_bases
ATGTGGAAGAGAGTTAGTATGGAGGAAATACAACAGCCTTCTTATAAAGAATACACTTCAGCAGTAATAAAAGATTTGTC
TCATGATACAGTAAAAATAAAAGAGACAAAGAAATTAGCTGGATTGCCGACAGAGATATTGGCTTTAAGGGATAAAGCTT
TTGGCATAGAAGGCAAATTTATAAATATGGTAAAAGATTTTTACAATGCAGGTTTTCACATTGAGATTTCTCAAAACAGT
AATGTTGAAAAACCTATAGTGATTGATTATATAACAAATGAACAAAATGACACATTGATTGATTATAACATAATTGAAGC
GGAAGCTAATTCGCAAGTTACAATCGTTTTTGACTATAATTCAGGTACAAAAGGCTTTCACAATGGCATAACGCAGGTGA
TTGCAAAAGAAGGTTCTACTGTAAATATAGTAAAAATACAAAGATTGGGAGACGAATTCAACGACTTTGACAATAACCTT
GTAATTGTAGGGAAAAATGCTATGGTCAACTGGTCAAATGTTGTGATAGGCTCGAAAGTAAGCGCTTTTGATGTGGCGGT
ATATCTTGATGAGGTAGGAGGTACCTTTACTTCCAAATCCATTTTTTTAGGTGTGGATAGTCAAAAATATGACATGGCTT
ATAAAGTATACCACCAAGCTCCTAAAACTACCAGCAGTGTGGACTTAAAAGGAGCCTTAAAAGGAAGTGCAAAGGCTACC
TTTATAGGAAATATTGACATTAAAAAAGGTGCAAAAAAGGCAAAAGCTGAAGAAAATGAAACAGTACTTTTATTAGACAA
AACTGTAAAATCCGTTGCAATTCCTGCTCTTTACTGCGGAGAAGATGATGTACAGGCAAACCACTCAGCCAGTGCAGGGC
AAATAGATGAAGACAAACTCTATTATGTGATGAGCAGAGGCTTTAGTTTAGAAGAGGCAAGGCTTTTAATGGTTCAAGCC
ATATTAAATCCTGTTATAGACTTGATTCCTTATGACCCTGTAAGAGAAATCATCATAAAGGGTCATATAGGAAGGAGGAT
TATAAAGTGA

Upstream 100 bases:

>100_bases
GTTGAGCCTATAGCTAAAGCTTTGCCATTGGAATATGCAGTGGAGATGAATAGGCTCATTAAACTTGAGCTGGAAGGCGC
AATAGGATAGGAGTGAAAAT

Downstream 100 bases:

>100_bases
AAAATATCGATATTGAAAGAATAAAAAAAGACTTTCCTATATTGAGTGTTAAGCCCCATGGAAAAAGGCTTGTATATCTT
GACAATGCCGCTACAACACA

Product: SufBD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MWKRVSMEEIQQPSYKEYTSAVIKDLSHDTVKIKETKKLAGLPTEILALRDKAFGIEGKFINMVKDFYNAGFHIEISQNS
NVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNL
VIVGKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKGSAKAT
FIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQA
ILNPVIDLIPYDPVREIIIKGHIGRRIIK

Sequences:

>Translated_349_residues
MWKRVSMEEIQQPSYKEYTSAVIKDLSHDTVKIKETKKLAGLPTEILALRDKAFGIEGKFINMVKDFYNAGFHIEISQNS
NVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNL
VIVGKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKGSAKAT
FIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQA
ILNPVIDLIPYDPVREIIIKGHIGRRIIK
>Mature_349_residues
MWKRVSMEEIQQPSYKEYTSAVIKDLSHDTVKIKETKKLAGLPTEILALRDKAFGIEGKFINMVKDFYNAGFHIEISQNS
NVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYNSGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNL
VIVGKNAMVNWSNVVIGSKVSAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKGSAKAT
FIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQIDEDKLYYVMSRGFSLEEARLLMVQA
ILNPVIDLIPYDPVREIIIKGHIGRRIIK

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=216, Percent_Identity=23.1481481481481, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787971, Length=295, Percent_Identity=18.9830508474576, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 38744; Mature: 38744

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKRVSMEEIQQPSYKEYTSAVIKDLSHDTVKIKETKKLAGLPTEILALRDKAFGIEGKF
CCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCCHH
INMVKDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYN
HHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECC
SGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNLVIVGKNAMVNWSNVVIGSKV
CCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHCCCCCCEEEECCCCEEEECEEEECCCC
SAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKGSAKAT
CCEEEEEEEEHHCCCEECCEEEEEECCCCHHHHEEEECCCCCCCCCEEEEEECCCCCEEE
FIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQIDEDKL
EEEEEECCCCCCCCCCCCCCEEEEEECCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCE
YYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIKGHIGRRIIK
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCHHHHCC
>Mature Secondary Structure
MWKRVSMEEIQQPSYKEYTSAVIKDLSHDTVKIKETKKLAGLPTEILALRDKAFGIEGKF
CCCCCCHHHHCCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCCHH
INMVKDFYNAGFHIEISQNSNVEKPIVIDYITNEQNDTLIDYNIIEAEANSQVTIVFDYN
HHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECC
SGTKGFHNGITQVIAKEGSTVNIVKIQRLGDEFNDFDNNLVIVGKNAMVNWSNVVIGSKV
CCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHCCCCCCEEEECCCCEEEECEEEECCCC
SAFDVAVYLDEVGGTFTSKSIFLGVDSQKYDMAYKVYHQAPKTTSSVDLKGALKGSAKAT
CCEEEEEEEEHHCCCEECCEEEEEECCCCHHHHEEEECCCCCCCCCEEEEEECCCCCEEE
FIGNIDIKKGAKKAKAEENETVLLLDKTVKSVAIPALYCGEDDVQANHSASAGQIDEDKL
EEEEEECCCCCCCCCCCCCCEEEEEECCHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCE
YYVMSRGFSLEEARLLMVQAILNPVIDLIPYDPVREIIIKGHIGRRIIK
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]