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The map label for this gene is pdtaR [H]

Identifier: 167040800

GI number: 167040800

Start: 2175957

End: 2176529

Strand: Reverse

Name: pdtaR [H]

Synonym: Teth514_2177

Alternate gene names: 167040800

Gene position: 2176529-2175957 (Counterclockwise)

Preceding gene: 167040801

Following gene: 167040798

Centisome position: 88.58

GC content: 34.03

Gene sequence:

>573_bases
ATGAGCCAATGGCGAATTGTTTTGGCAGACAGCAGTGATTTGTCTCGGCAGTTCATAAAGAATGTGTTATTAGCGAATGG
ACACTTGGTTTATGAAGCGAGAGATGGCGGAAGTGCTATAAGGCTTTGTCGCGCTCTCGCTCCTGATTTAGTTATAGCGG
ATTTGAATCTTGCCAATATAAATGGTTATGAAGTTGGACGCATTATAAATGAAGATGATATAGCACCTGTAATTTTGATG
ACTTCTACTCTTCAAAGAGATTTTCTTGAGGAAATAAGAAAATATTCTGTATTTTCTTATTTATTAAAGCCAGTAGACAG
AGGGGTACTTTTGTCGACAGTTGAATTTGTCATAGAAAATTACAAAAAGTTTAGGAGCATGAAAGAGGAAATTCAAAAAT
TAAAGCATGAACTTGAAGCGAGGAAAAAGATTGAAAAGGCAAAAGGGTATATTATGAAAACTAAAGGATTGAGTGAAGAG
GAAGCTTATAAAATTATGAGAAAGATGAGCATGGATTTGTCAATTCCAATGGAAATAATAGCTGAAATGATATTACAAGA
ATATAAAGAATAA

Upstream 100 bases:

>100_bases
GAGGCTAAAAGAGCAGAATGGGATGAGTACAAAATATACGTTACTCAGTGGGAATTAGATCAATATCTTTCTAAATTCTA
AGTTAATTAGAGGTGTCTCG

Downstream 100 bases:

>100_bases
GAGGCGTGAGACCGCCTCTTTTATTCTTCAAACATGCTTTTTTTTACTATTTTTTTATCTTTTATCATGAATACTCCTTT
TGCAATAACAGAATGAATAT

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MSQWRIVLADSSDLSRQFIKNVLLANGHLVYEARDGGSAIRLCRALAPDLVIADLNLANINGYEVGRIINEDDIAPVILM
TSTLQRDFLEEIRKYSVFSYLLKPVDRGVLLSTVEFVIENYKKFRSMKEEIQKLKHELEARKKIEKAKGYIMKTKGLSEE
EAYKIMRKMSMDLSIPMEIIAEMILQEYKE

Sequences:

>Translated_190_residues
MSQWRIVLADSSDLSRQFIKNVLLANGHLVYEARDGGSAIRLCRALAPDLVIADLNLANINGYEVGRIINEDDIAPVILM
TSTLQRDFLEEIRKYSVFSYLLKPVDRGVLLSTVEFVIENYKKFRSMKEEIQKLKHELEARKKIEKAKGYIMKTKGLSEE
EAYKIMRKMSMDLSIPMEIIAEMILQEYKE
>Mature_189_residues
SQWRIVLADSSDLSRQFIKNVLLANGHLVYEARDGGSAIRLCRALAPDLVIADLNLANINGYEVGRIINEDDIAPVILMT
STLQRDFLEEIRKYSVFSYLLKPVDRGVLLSTVEFVIENYKKFRSMKEEIQKLKHELEARKKIEKAKGYIMKTKGLSEEE
AYKIMRKMSMDLSIPMEIIAEMILQEYKE

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 21936; Mature: 21805

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQWRIVLADSSDLSRQFIKNVLLANGHLVYEARDGGSAIRLCRALAPDLVIADLNLANI
CCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCEEECCCEECC
NGYEVGRIINEDDIAPVILMTSTLQRDFLEEIRKYSVFSYLLKPVDRGVLLSTVEFVIEN
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YKKFRSMKEEIQKLKHELEARKKIEKAKGYIMKTKGLSEEEAYKIMRKMSMDLSIPMEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHH
AEMILQEYKE
HHHHHHHHCC
>Mature Secondary Structure 
SQWRIVLADSSDLSRQFIKNVLLANGHLVYEARDGGSAIRLCRALAPDLVIADLNLANI
CCCEEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCEEECCCEECC
NGYEVGRIINEDDIAPVILMTSTLQRDFLEEIRKYSVFSYLLKPVDRGVLLSTVEFVIEN
CCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YKKFRSMKEEIQKLKHELEARKKIEKAKGYIMKTKGLSEEEAYKIMRKMSMDLSIPMEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHH
AEMILQEYKE
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]