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The map label for this gene is ybgL [C]

Identifier: 167040232

GI number: 167040232

Start: 1613409

End: 1614179

Strand: Direct

Name: ybgL [C]

Synonym: Teth514_1594

Alternate gene names: 167040232

Gene position: 1613409-1614179 (Clockwise)

Preceding gene: 167040231

Following gene: 167040233

Centisome position: 65.66

GC content: 35.93

Gene sequence:

>771_bases
ATGAAATATCGAGTGGACATAAATAGTGACATTGGTGAAAGTTTTGGGGTGTATAAAATAGGTATGGATGAGGAAATAGT
AAAATACATTTCATCAGCAAATATTGCTTGTGGATTTCATGCAGGTGATCCTATTGTAATGGCAAATACTGTTGAAAGAT
GTGCTAAAAATAAAGTGGCGGTAGGAGCTCATCCTGGATTTCCTGATCTATTGGGATTTGGAAGAAGAAATATAGATGTA
TCACCCACAGATGTAAAAAATTATATCATATATCAAATTGGAGCCTTACAAGCTTTTGCTATAAGTAACGGTATAAAATT
GCAACATGTTAAAGCTCATGGCGCCTTGTACAACATGGCTGCAACAGATGAAAAACTTGCTATAGCAATTGCCGAAGCAA
TAGCTTCAGTAAATGAAAATCTCATATGCGTTGGGATGGCCAATACAGCCATGCAGATGGCAGCTGAAAAAGTAGGGTTG
AGATTTGCTTGTGAGGTTTTTGCTGATAGAAACATAAATCCTGATGGTACTTTAGTTTCTAGAAAGCTTCCAAATGCTAT
TATACACGATGAAGAATTGGCTTGCAGAAGAGTGCTTCGAATGATTAAAGAGGGAGTTTGTGAGGCTATAGATGGTAGTC
TAGTAAAAGTGAAAGTTGATACTATATGTGTTCATGGTGATAATCCCCAGGCTGTAGAATTTGCTAAAAGAATAAAAAAG
ACTTTAGAAGAAAATGGAGTTGAAATAATACCCATCGGTGAGTTTTTATAA

Upstream 100 bases:

>100_bases
TTTTTCTCAAATCTTTTTGTATCAAGTATTGTAAGGTTTGATATCCCCCAAAATTAGGGGTTTATCTGACATAACTCTAA
GTAAAAAAGGAGGTATGTTT

Downstream 100 bases:

>100_bases
TACAGGGAGTTGATTATAATGTATGAAAAACCTAAAATTCTCTTATGCGGGGACAAGGCTGTTATAGTTGAATTTGGAAA
TGAAATAAGTGAGGAATGCA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKYRVDINSDIGESFGVYKIGMDEEIVKYISSANIACGFHAGDPIVMANTVERCAKNKVAVGAHPGFPDLLGFGRRNIDV
SPTDVKNYIIYQIGALQAFAISNGIKLQHVKAHGALYNMAATDEKLAIAIAEAIASVNENLICVGMANTAMQMAAEKVGL
RFACEVFADRNINPDGTLVSRKLPNAIIHDEELACRRVLRMIKEGVCEAIDGSLVKVKVDTICVHGDNPQAVEFAKRIKK
TLEENGVEIIPIGEFL

Sequences:

>Translated_256_residues
MKYRVDINSDIGESFGVYKIGMDEEIVKYISSANIACGFHAGDPIVMANTVERCAKNKVAVGAHPGFPDLLGFGRRNIDV
SPTDVKNYIIYQIGALQAFAISNGIKLQHVKAHGALYNMAATDEKLAIAIAEAIASVNENLICVGMANTAMQMAAEKVGL
RFACEVFADRNINPDGTLVSRKLPNAIIHDEELACRRVLRMIKEGVCEAIDGSLVKVKVDTICVHGDNPQAVEFAKRIKK
TLEENGVEIIPIGEFL
>Mature_256_residues
MKYRVDINSDIGESFGVYKIGMDEEIVKYISSANIACGFHAGDPIVMANTVERCAKNKVAVGAHPGFPDLLGFGRRNIDV
SPTDVKNYIIYQIGALQAFAISNGIKLQHVKAHGALYNMAATDEKLAIAIAEAIASVNENLICVGMANTAMQMAAEKVGL
RFACEVFADRNINPDGTLVSRKLPNAIIHDEELACRRVLRMIKEGVCEAIDGSLVKVKVDTICVHGDNPQAVEFAKRIKK
TLEENGVEIIPIGEFL

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=42.2131147540984, Blast_Score=203, Evalue=7e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27790; Mature: 27790

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRVDINSDIGESFGVYKIGMDEEIVKYISSANIACGFHAGDPIVMANTVERCAKNKVA
CEEEEECCCCCCCCCCEEEECCCHHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHCCCEE
VGAHPGFPDLLGFGRRNIDVSPTDVKNYIIYQIGALQAFAISNGIKLQHVKAHGALYNMA
ECCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEEECCCEEEECC
ATDEKLAIAIAEAIASVNENLICVGMANTAMQMAAEKVGLRFACEVFADRNINPDGTLVS
CCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCHHEEEEEHHCCCCCCCCCEEH
RKLPNAIIHDEELACRRVLRMIKEGVCEAIDGSLVKVKVDTICVHGDNPQAVEFAKRIKK
HHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHHH
TLEENGVEIIPIGEFL
HHHHCCCEEEECCCCC
>Mature Secondary Structure
MKYRVDINSDIGESFGVYKIGMDEEIVKYISSANIACGFHAGDPIVMANTVERCAKNKVA
CEEEEECCCCCCCCCCEEEECCCHHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHCCCEE
VGAHPGFPDLLGFGRRNIDVSPTDVKNYIIYQIGALQAFAISNGIKLQHVKAHGALYNMA
ECCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEEECCCEEEECC
ATDEKLAIAIAEAIASVNENLICVGMANTAMQMAAEKVGLRFACEVFADRNINPDGTLVS
CCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHCHHEEEEEHHCCCCCCCCCEEH
RKLPNAIIHDEELACRRVLRMIKEGVCEAIDGSLVKVKVDTICVHGDNPQAVEFAKRIKK
HHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCHHHHHHHHHHH
TLEENGVEIIPIGEFL
HHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]