| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040009
Identifier: 167040009
GI number: 167040009
Start: 1407548
End: 1408903
Strand: Reverse
Name: 167040009
Synonym: Teth514_1368
Alternate gene names: NA
Gene position: 1408903-1407548 (Counterclockwise)
Preceding gene: 167040018
Following gene: 167040003
Centisome position: 57.34
GC content: 32.74
Gene sequence:
>1356_bases ATGAGTTTAACACTTAATCTTACAAAAGAAAAGGGGTTTTCAAAATATATTTTGCCAGCAACTTTTGATAATTTTACAGT ATCAAACAATGTAACTTTCACCTATATCCAAGCATTTAAAGAAAAAATCGGCTTTAATAAAATTCTTTCAAGCATATTAT CCTTTAAAAAAGCACCAAATGCTGTTTTTCAACCAGCCGAGATTATTGACTTTATGATTGATTCTGTAATTCAAGGGAAT ACCCGCTTTCTTCACATGGACCAACTAAGATATGATAATGCATACACAGAAATTAAAGGGCATAAAGTTCCCAGCGAAAA AGTATGCAGAGACTTAATTAAAGCTTTGCCTGAAAGTTCTCTTGAAGAATTAAGACTTATTAACAAGACTTTGCTTTCCT TGCAATCTAAAGGAACGAAACGTGAAGTCATTATGAATTTTGATGATACAGTTTGTACTATATTTGGAGAGCAGGAAGGT GCTTCAGTAGGTTATAATCCAAGGTACCATGGTCGACCATCTTTCAAAGAGAAAATCGGCATTATTGCTAATACTGATGA ACTTGTTAATGTTACTCTTGAAGAAGGTAAACATCACACAAATCATGGTTTCTTAGATTTTGTAAAATCTTGCGAAGAAC AGCTTCCTGAAAATTGGATAATTAAGCGAGTACGCGTTGACCGTGGAGCATTTGACTACGATAATATGCTGTATTTTGAA TCTAAAGGTTATGAATATGTAATGAAAGCTAAAAATCAGGCATGGATCAGATGCTTTATAGACTATGTCAATCAAAGAGA ACACCTTTATCCTTGGACTGAAATAGATAAAACCTTTAGTGTAAATGAAATATATGCAAAAATGCCTAAATGGGATAAAG TACGCAGAATTGTGATTATACGCAAAAAACTGCCACAGCCCAAAACAGGGCAGATTTGTATGGATATAGACGAATTCAAA TATGAATATCAAGCTATAGTAACAAATATTGAGTACATGACACCTGAAGAAATATTTCATGAATACAACCAACGCTGCGA CATTGAAAACAAAATAGATGAACTAAAAGAAGGATTTGCTTTTTCAAAAAACAGTCAAAGAAACAAATTTTGCAACGAAA TATTTTTGCTTATCAAAATGATCGCTTACAATCTCCATAATTGGTTCAAAAGGACTATCTTGCCAGAGTTTATGAGTCAT CATGAGATAACCACAATAAGGCGAATATTATATAATGTACCTGGTAATCTTGTTGGGAAAGGACGTTATAGGCATATACG TTATCCTAATAATCCGTTTCTTAAAACTGTGATAACGTATATACGAAAAGCACTAATGGTATTTTGCTTAACATAG
Upstream 100 bases:
>100_bases AGTGAAAAATTTTTTACAAAAAATATATGGAGATTCCCCTTTTTCTGATAAAATTTAAGTGTCAAACAAAAACATTAACA GAAAGGAGAATCTCCATAAT
Downstream 100 bases:
>100_bases TAAACACATAGAATATACCAAAAAATATACCAAATGATAGAAACCGCCATATCAAGTAGACGGTTAGCTTTGCTATACCT TAAAAGAGTAAATTAACTGT
Product: transposase, IS4 family protein
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISEcp1 Transposase
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MSLTLNLTKEKGFSKYILPATFDNFTVSNNVTFTYIQAFKEKIGFNKILSSILSFKKAPNAVFQPAEIIDFMIDSVIQGN TRFLHMDQLRYDNAYTEIKGHKVPSEKVCRDLIKALPESSLEELRLINKTLLSLQSKGTKREVIMNFDDTVCTIFGEQEG ASVGYNPRYHGRPSFKEKIGIIANTDELVNVTLEEGKHHTNHGFLDFVKSCEEQLPENWIIKRVRVDRGAFDYDNMLYFE SKGYEYVMKAKNQAWIRCFIDYVNQREHLYPWTEIDKTFSVNEIYAKMPKWDKVRRIVIIRKKLPQPKTGQICMDIDEFK YEYQAIVTNIEYMTPEEIFHEYNQRCDIENKIDELKEGFAFSKNSQRNKFCNEIFLLIKMIAYNLHNWFKRTILPEFMSH HEITTIRRILYNVPGNLVGKGRYRHIRYPNNPFLKTVITYIRKALMVFCLT
Sequences:
>Translated_451_residues MSLTLNLTKEKGFSKYILPATFDNFTVSNNVTFTYIQAFKEKIGFNKILSSILSFKKAPNAVFQPAEIIDFMIDSVIQGN TRFLHMDQLRYDNAYTEIKGHKVPSEKVCRDLIKALPESSLEELRLINKTLLSLQSKGTKREVIMNFDDTVCTIFGEQEG ASVGYNPRYHGRPSFKEKIGIIANTDELVNVTLEEGKHHTNHGFLDFVKSCEEQLPENWIIKRVRVDRGAFDYDNMLYFE SKGYEYVMKAKNQAWIRCFIDYVNQREHLYPWTEIDKTFSVNEIYAKMPKWDKVRRIVIIRKKLPQPKTGQICMDIDEFK YEYQAIVTNIEYMTPEEIFHEYNQRCDIENKIDELKEGFAFSKNSQRNKFCNEIFLLIKMIAYNLHNWFKRTILPEFMSH HEITTIRRILYNVPGNLVGKGRYRHIRYPNNPFLKTVITYIRKALMVFCLT >Mature_450_residues SLTLNLTKEKGFSKYILPATFDNFTVSNNVTFTYIQAFKEKIGFNKILSSILSFKKAPNAVFQPAEIIDFMIDSVIQGNT RFLHMDQLRYDNAYTEIKGHKVPSEKVCRDLIKALPESSLEELRLINKTLLSLQSKGTKREVIMNFDDTVCTIFGEQEGA SVGYNPRYHGRPSFKEKIGIIANTDELVNVTLEEGKHHTNHGFLDFVKSCEEQLPENWIIKRVRVDRGAFDYDNMLYFES KGYEYVMKAKNQAWIRCFIDYVNQREHLYPWTEIDKTFSVNEIYAKMPKWDKVRRIVIIRKKLPQPKTGQICMDIDEFKY EYQAIVTNIEYMTPEEIFHEYNQRCDIENKIDELKEGFAFSKNSQRNKFCNEIFLLIKMIAYNLHNWFKRTILPEFMSHH EITTIRRILYNVPGNLVGKGRYRHIRYPNNPFLKTVITYIRKALMVFCLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53173; Mature: 53042
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTLNLTKEKGFSKYILPATFDNFTVSNNVTFTYIQAFKEKIGFNKILSSILSFKKAPN CEEEEEEHHCCCCCEEECEECCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC AVFQPAEIIDFMIDSVIQGNTRFLHMDQLRYDNAYTEIKGHKVPSEKVCRDLIKALPESS CCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHCCCCCCCHHHHHHHHHHHCCCCH LEELRLINKTLLSLQSKGTKREVIMNFDDTVCTIFGEQEGASVGYNPRYHGRPSFKEKIG HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCC IIANTDELVNVTLEEGKHHTNHGFLDFVKSCEEQLPENWIIKRVRVDRGAFDYDNMLYFE EEECCHHHEEEEHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEE SKGYEYVMKAKNQAWIRCFIDYVNQREHLYPWTEIDKTFSVNEIYAKMPKWDKVRRIVII CCCCCEEHHCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHCCCHHHHHHHEEE RKKLPQPKTGQICMDIDEFKYEYQAIVTNIEYMTPEEIFHEYNQRCDIENKIDELKEGFA HHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC FSKNSQRNKFCNEIFLLIKMIAYNLHNWFKRTILPEFMSHHEITTIRRILYNVPGNLVGK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC GRYRHIRYPNNPFLKTVITYIRKALMVFCLT CCEEEECCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLTLNLTKEKGFSKYILPATFDNFTVSNNVTFTYIQAFKEKIGFNKILSSILSFKKAPN EEEEEEHHCCCCCEEECEECCCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCC AVFQPAEIIDFMIDSVIQGNTRFLHMDQLRYDNAYTEIKGHKVPSEKVCRDLIKALPESS CCCCHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHCCCCCCCHHHHHHHHHHHCCCCH LEELRLINKTLLSLQSKGTKREVIMNFDDTVCTIFGEQEGASVGYNPRYHGRPSFKEKIG HHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCC IIANTDELVNVTLEEGKHHTNHGFLDFVKSCEEQLPENWIIKRVRVDRGAFDYDNMLYFE EEECCHHHEEEEHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEEE SKGYEYVMKAKNQAWIRCFIDYVNQREHLYPWTEIDKTFSVNEIYAKMPKWDKVRRIVII CCCCCEEHHCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHCCCHHHHHHHEEE RKKLPQPKTGQICMDIDEFKYEYQAIVTNIEYMTPEEIFHEYNQRCDIENKIDELKEGFA HHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC FSKNSQRNKFCNEIFLLIKMIAYNLHNWFKRTILPEFMSHHEITTIRRILYNVPGNLVGK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC GRYRHIRYPNNPFLKTVITYIRKALMVFCLT CCEEEECCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA