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The map label for this gene is 167040003

Identifier: 167040003

GI number: 167040003

Start: 1401795

End: 1402043

Strand: Reverse

Name: 167040003

Synonym: Teth514_1362

Alternate gene names: NA

Gene position: 1402043-1401795 (Counterclockwise)

Preceding gene: 167040009

Following gene: 167039997

Centisome position: 57.06

GC content: 38.96

Gene sequence:

>249_bases
ATGGATGGTTTCTATTCCGATTTAGAAGCATTTGGTGAAGAACTTAAAAATATTCGCAAATCTCTGGGGCTTTCCCAAAG
CGATGTTACTGAACAAGTTTTCATCAGCAGGGATACACTTAGAAAATTTGAAAACGGTAAAGTCATACCCAAACAGGAAA
CTTTAGATCTTTTGTCCCATCTCTATGAGTGCAAGTCAATTGCATCTTCTTCCCACAGTCAAACAAGGGGGACGGTTCCT
TTTATCTGA

Upstream 100 bases:

>100_bases
CCATCTTCACCTGCTCTTTACATTTCCTTCTTTTAACTATATAATAGATAATAACCAACATAATTTCAAGCCGATTTGAA
TCGGCATGGGGTGTTAAAAA

Downstream 100 bases:

>100_bases
AAAAATCAGACAGAAGGAACCGTCCCTCCTGTTTGATTATGTATCAGCAAGAGCACCAGTTGGTATTTCAAATAATGTAA
CCGCTACATGATTTATAATT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MDGFYSDLEAFGEELKNIRKSLGLSQSDVTEQVFISRDTLRKFENGKVIPKQETLDLLSHLYECKSIASSSHSQTRGTVP
FI

Sequences:

>Translated_82_residues
MDGFYSDLEAFGEELKNIRKSLGLSQSDVTEQVFISRDTLRKFENGKVIPKQETLDLLSHLYECKSIASSSHSQTRGTVP
FI
>Mature_82_residues
MDGFYSDLEAFGEELKNIRKSLGLSQSDVTEQVFISRDTLRKFENGKVIPKQETLDLLSHLYECKSIASSSHSQTRGTVP
FI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9269; Mature: 9269

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGFYSDLEAFGEELKNIRKSLGLSQSDVTEQVFISRDTLRKFENGKVIPKQETLDLLSH
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LYECKSIASSSHSQTRGTVPFI
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDGFYSDLEAFGEELKNIRKSLGLSQSDVTEQVFISRDTLRKFENGKVIPKQETLDLLSH
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LYECKSIASSSHSQTRGTVPFI
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA