Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

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The map label for this gene is yvjA [H]

Identifier: 167039619

GI number: 167039619

Start: 987438

End: 988283

Strand: Direct

Name: yvjA [H]

Synonym: Teth514_0967

Alternate gene names: 167039619

Gene position: 987438-988283 (Clockwise)

Preceding gene: 167039618

Following gene: 167039620

Centisome position: 40.18

GC content: 35.22

Gene sequence:

>846_bases
ATGAAAATTACCGCTAAAAAAATAATAATAGATTTTTTTGGGGTTAGTGTAGGAACATTACTTGTGGCTTTATCCTTAGA
TTTGTTTTTGGCACCTAACAAAATTGCTCCTGGTGGAGTAAGTGGACTTGCAGTTGTTCTACAACATTTGTTTGGATGGC
CAATAGGAGCAGTTACCTTGGCAATAAATATTCCGCTTTTTATCATCTCGACTAAAGCTTTAGGAACAGGTTTTGGAGCT
AAAACACTTTATTCAACTATTTTATTAGGTGTTTCTATTGATGCATTGGCTTTTTTAAAACCTCTTACCCATGATACAAT
ATTGGCGGCAGTATATGGTGGTATAATAATGGGTGTAGGGATAGGTATTGTGATAAAATATGGAGCAACAACTGGTGGAA
CAGACATGGCTGCTATGACTTTGCATAAATACATACACTTTTTAAGTGTGGGCAGAATACTGCTTATAATAGACTTTGTA
ATAATAACTTTAGCAGGCATAGTTTTTAGCCCGGAACTTGCCCTTTATGCTTTAGCTACTGAATTTATTTCTATCAAAGT
TATTGACCTCATACAAGAAGGTAGTGGCGATGAGAGAATTGCTATAATTATTTCTGATAGGTATGAGGAAATTAGTAAAT
CAATATTGGAGGAAATGGAAAGGGGGGTAACAGAACTAAAAGGAAGAGGGGGTTATTCAAAAAAGGACAAAAATGTTTTG
TTGTGTGTTGTAACTCGTAGAGAAGTTACAACCTTAAGAAGCCTTGTGAAAAGAATAGACCCCAACGCTTTCATGATATT
ATCAACAGCCCATGAAGTTTTAGGAGAAGGATTTAAAAACATGTGA

Upstream 100 bases:

>100_bases
TATTATTTGAGCACAATATTTCTTAAGCGAGGATGAAATAATAAGTCTTATAAAAGATTGCTACTATTCAAAAACTAACA
GAATCTTTAAGGAGGATATT

Downstream 100 bases:

>100_bases
AATGGAGGTATTGGTATGGACAAAGAATTTTTAAAGCAAAAGGCAAAAGAAGTGAGAATAGACATCATAAACATGTTGGC
AGAAGCAGGATCTGGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTLAINIPLFIISTKALGTGFGA
KTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVGIGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFV
IITLAGIVFSPELALYALATEFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL
LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM

Sequences:

>Translated_281_residues
MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTLAINIPLFIISTKALGTGFGA
KTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVGIGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFV
IITLAGIVFSPELALYALATEFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL
LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM
>Mature_281_residues
MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTLAINIPLFIISTKALGTGFGA
KTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVGIGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFV
IITLAGIVFSPELALYALATEFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL
LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 30149; Mature: 30149

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCHHHEEE
AINIPLFIISTKALGTGFGAKTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVG
EEECEEEEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
IGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFVIITLAGIVFSPELALYALAT
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL
HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM
EEEEECHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKITAKKIIIDFFGVSVGTLLVALSLDLFLAPNKIAPGGVSGLAVVLQHLFGWPIGAVTL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCHHHEEE
AINIPLFIISTKALGTGFGAKTLYSTILLGVSIDALAFLKPLTHDTILAAVYGGIIMGVG
EEECEEEEEEEHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCC
IGIVIKYGATTGGTDMAAMTLHKYIHFLSVGRILLIIDFVIITLAGIVFSPELALYALAT
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EFISIKVIDLIQEGSGDERIAIIISDRYEEISKSILEEMERGVTELKGRGGYSKKDKNVL
HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
LCVVTRREVTTLRSLVKRIDPNAFMILSTAHEVLGEGFKNM
EEEEECHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]