| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is manR [H]
Identifier: 167039477
GI number: 167039477
Start: 857091
End: 859049
Strand: Direct
Name: manR [H]
Synonym: Teth514_0823
Alternate gene names: 167039477
Gene position: 857091-859049 (Clockwise)
Preceding gene: 167039476
Following gene: 167039478
Centisome position: 34.88
GC content: 29.91
Gene sequence:
>1959_bases ATGGATAGGATACTTGAGATTATAAATATGCTTTTAAATAGCGAACAGCCACTTACGGTTGATTATATCGCAAATACACT GAAAGTATCGAATAAAACAATAAGGAATGATTTAAAAAAAGCTGAAGAATATGTACAACAAAAAGGCGTAAAAATTATCA AAAAACCAAGAGTAGGTATTGTACTAGAGGGGCCTAGAAATAAAAAGCTTGAACTTGCTGATGAGATTAAAAAGAGTTTA GACTTTGAAGAACCTTTTTCGCCTGAAGCAAGAAAAAACTACATTTTAAAGCGATTGTTTATGAGTAAAGGAAGTGTAAC TACAAAAGAACTAGCGGAGGAACTTTATGTAAGTAGGGTTACAATACACAAAGACTTACAAAGTGTTGAAAAATGGCTTA ACAAATTCAATCTAAAACTTCTAAAAAAACCTAATTATGGCATTGAAGTGGTAGGCGATGAAGAGAATTGGCGAAATGCA GTGGCAAGCTTAATTGTTTTAACTAAAGAACAAAAAGAATTAAAAGAATTTTTATATAATGATTACACTGGTAGGATAGA TTATAGAACATTAATGCAATTAAAGGAACTTTTTGATATTGATTACAAGCAACTTGAAAAAATAGTTAGTAATGCTGAAT CAAAACTCAAATTTAGATTTTCGGATGAAGCTTTTATAAGTTTGGTTATACATGTAGCTATTTCTATCGAAAGACTAAAG CATAAAAAAGATGTTAAATTATCAAAGGCGGTCTTAAATAATCTAAAGCAAAAAGATGAATATGTGATAGCTCAACAGAT GGCGAAAGAGATTGAAGAGAAATTCAATGTAGTTCTTTCTGAATCAGAAATAGGATATATTGTATTGCATATCATTGGTA CTAAAATGCAGCAAAATAAAATTGAAGATGTGAATTTAGAGTTGGAAGATGAAGAAAGTATTGAGCTAGCGGTTATTATG TCAAAAGAAATTATAAATATTGCTGAAAGGGCATTATCTCTTGATTTAAGCAATGATAAGCAATTGTTAAATGGTTTGAT ACTACATTTAAGACCAACTATAAATAGGCTCAAGTATGGTTTAACACTAAGAAATCCACTATTAAACGATATTAAAGAGA ATTATCCTGAAATATATGGGGTTGCATGGATGACAAGTGTTGTGTTTGAGAAGTATTTAGGTAAAAAAGTTGCAGAAGAG GAAATAGGCTATATTGCACTACATTTAGGTGCTGCAGTTGAACGAGCTAAAAAACCACTTAAAGCCCTGGTTGTTTGTAC AACTGGCATTGGAACAGCACAACTTCTTGCGGCAAGGCTTGAGAAATCTTTTAAACAGATAGAAATAAAAGACATAGTTT CTTCTGTTTCGCTACATGAGAGCATCTTAAATGACATAGATATAGTTATCTCTACTGTACCTATTGAGATAAATAAACCT TTTATAAATATAAGTCCTTTATTAACTCAAAATGATATAAAGCGGCTTGATGAATTTATACAGGCTCTAAATAAGAGATC TAATTTAATTGATACGCAGTTACTTGATGTTGACGGTATTTATCTAAAAAAAGAAGATTTATTAAATAAGGTATGTATGG AGTTGCATAAAAAAGGATATGTAAAGGAGGAATATATTCAAGATGTTATAACCAGAGAAAAAATAGCTTCTACTGCTATA GGAAATGGTATTGCAATTCCACATGGTTTACCAGAACATGTTAATAAATCAGTTTTTACAGTGGTAAGACTAAAAAATCC TATAGCTTGGGATGAAGAAAAGGTAGATATGTTATTTATGATATCTTTAACTCAAAGTGATATAGCAAAATCCAGGTATA TATTTAGAAAATTATATAATAAACTTGAATCACCGGAATTTGTAGAAAATATAAAAAAAGCAAAAAACAGAGAAGAAATT ATAAAGTTATTGGAGGTAATTTACGATGCTGATAAATAA
Upstream 100 bases:
>100_bases CCTTGAAAATAAACGTTTTTTAGGTATAATATTAATCGAAAGCTGAAATAAATTTGTTAATATAGTTACCACATTAAATG TGGTAAAAGGGTGATTAATT
Downstream 100 bases:
>100_bases AAATCTTGTCACACTAAATCTTGAGGCAAAAACCAAAGAAGAGGCAATTACAAAATTGGCTGAGTTAGCTCAGAAAGAAG GTAAAATAACTTCCATAGAT
Product: transcriptional antiterminator BglG
Products: NA
Alternate protein names: Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 652; Mature: 652
Protein sequence:
>652_residues MDRILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKKAEEYVQQKGVKIIKKPRVGIVLEGPRNKKLELADEIKKSL DFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRVTIHKDLQSVEKWLNKFNLKLLKKPNYGIEVVGDEENWRNA VASLIVLTKEQKELKEFLYNDYTGRIDYRTLMQLKELFDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLK HKKDVKLSKAVLNNLKQKDEYVIAQQMAKEIEEKFNVVLSESEIGYIVLHIIGTKMQQNKIEDVNLELEDEESIELAVIM SKEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGLTLRNPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEE EIGYIALHLGAAVERAKKPLKALVVCTTGIGTAQLLAARLEKSFKQIEIKDIVSSVSLHESILNDIDIVISTVPIEINKP FINISPLLTQNDIKRLDEFIQALNKRSNLIDTQLLDVDGIYLKKEDLLNKVCMELHKKGYVKEEYIQDVITREKIASTAI GNGIAIPHGLPEHVNKSVFTVVRLKNPIAWDEEKVDMLFMISLTQSDIAKSRYIFRKLYNKLESPEFVENIKKAKNREEI IKLLEVIYDADK
Sequences:
>Translated_652_residues MDRILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKKAEEYVQQKGVKIIKKPRVGIVLEGPRNKKLELADEIKKSL DFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRVTIHKDLQSVEKWLNKFNLKLLKKPNYGIEVVGDEENWRNA VASLIVLTKEQKELKEFLYNDYTGRIDYRTLMQLKELFDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLK HKKDVKLSKAVLNNLKQKDEYVIAQQMAKEIEEKFNVVLSESEIGYIVLHIIGTKMQQNKIEDVNLELEDEESIELAVIM SKEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGLTLRNPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEE EIGYIALHLGAAVERAKKPLKALVVCTTGIGTAQLLAARLEKSFKQIEIKDIVSSVSLHESILNDIDIVISTVPIEINKP FINISPLLTQNDIKRLDEFIQALNKRSNLIDTQLLDVDGIYLKKEDLLNKVCMELHKKGYVKEEYIQDVITREKIASTAI GNGIAIPHGLPEHVNKSVFTVVRLKNPIAWDEEKVDMLFMISLTQSDIAKSRYIFRKLYNKLESPEFVENIKKAKNREEI IKLLEVIYDADK >Mature_652_residues MDRILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKKAEEYVQQKGVKIIKKPRVGIVLEGPRNKKLELADEIKKSL DFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRVTIHKDLQSVEKWLNKFNLKLLKKPNYGIEVVGDEENWRNA VASLIVLTKEQKELKEFLYNDYTGRIDYRTLMQLKELFDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLK HKKDVKLSKAVLNNLKQKDEYVIAQQMAKEIEEKFNVVLSESEIGYIVLHIIGTKMQQNKIEDVNLELEDEESIELAVIM SKEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYGLTLRNPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEE EIGYIALHLGAAVERAKKPLKALVVCTTGIGTAQLLAARLEKSFKQIEIKDIVSSVSLHESILNDIDIVISTVPIEINKP FINISPLLTQNDIKRLDEFIQALNKRSNLIDTQLLDVDGIYLKKEDLLNKVCMELHKKGYVKEEYIQDVITREKIASTAI GNGIAIPHGLPEHVNKSVFTVVRLKNPIAWDEEKVDMLFMISLTQSDIAKSRYIFRKLYNKLESPEFVENIKKAKNREEI IKLLEVIYDADK
Specific function: May regulate the expression of the mannose operon [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788726, Length=134, Percent_Identity=29.8507462686567, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF00359 PTS_EIIA_2 [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 75050; Mature: 75050
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKKAEEYVQQKGVKIIKKPRVGI CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCE VLEGPRNKKLELADEIKKSLDFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRV EEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TIHKDLQSVEKWLNKFNLKLLKKPNYGIEVVGDEENWRNAVASLIVLTKEQKELKEFLYN HHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHC DYTGRIDYRTLMQLKELFDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLK CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECHHHHHHHHHHHHHHHHHHH HKKDVKLSKAVLNNLKQKDEYVIAQQMAKEIEEKFNVVLSESEIGYIVLHIIGTKMQQNK HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEECCCHHHHCC IEDVNLELEDEESIELAVIMSKEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYG CCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC LTLRNPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAAVERAKKPL CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHCHH KALVVCTTGIGTAQLLAARLEKSFKQIEIKDIVSSVSLHESILNDIDIVISTVPIEINKP HEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC FINISPLLTQNDIKRLDEFIQALNKRSNLIDTQLLDVDGIYLKKEDLLNKVCMELHKKGY EEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECHHHHHHHHHHHHHHCCC VKEEYIQDVITREKIASTAIGNGIAIPHGLPEHVNKSVFTVVRLKNPIAWDEEKVDMLFM CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHEEEEEECCCCCCCCCCCCEEEE ISLTQSDIAKSRYIFRKLYNKLESPEFVENIKKAKNREEIIKLLEVIYDADK EECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MDRILEIINMLLNSEQPLTVDYIANTLKVSNKTIRNDLKKAEEYVQQKGVKIIKKPRVGI CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCE VLEGPRNKKLELADEIKKSLDFEEPFSPEARKNYILKRLFMSKGSVTTKELAEELYVSRV EEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH TIHKDLQSVEKWLNKFNLKLLKKPNYGIEVVGDEENWRNAVASLIVLTKEQKELKEFLYN HHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHC DYTGRIDYRTLMQLKELFDIDYKQLEKIVSNAESKLKFRFSDEAFISLVIHVAISIERLK CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHEEEEECHHHHHHHHHHHHHHHHHHH HKKDVKLSKAVLNNLKQKDEYVIAQQMAKEIEEKFNVVLSESEIGYIVLHIIGTKMQQNK HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEEECCCHHHHCC IEDVNLELEDEESIELAVIMSKEIINIAERALSLDLSNDKQLLNGLILHLRPTINRLKYG CCCCCEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHC LTLRNPLLNDIKENYPEIYGVAWMTSVVFEKYLGKKVAEEEIGYIALHLGAAVERAKKPL CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHCHH KALVVCTTGIGTAQLLAARLEKSFKQIEIKDIVSSVSLHESILNDIDIVISTVPIEINKP HEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCC FINISPLLTQNDIKRLDEFIQALNKRSNLIDTQLLDVDGIYLKKEDLLNKVCMELHKKGY EEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEECHHHHHHHHHHHHHHCCC VKEEYIQDVITREKIASTAIGNGIAIPHGLPEHVNKSVFTVVRLKNPIAWDEEKVDMLFM CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHEEEEEECCCCCCCCCCCCEEEE ISLTQSDIAKSRYIFRKLYNKLESPEFVENIKKAKNREEIIKLLEVIYDADK EECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]