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The map label for this gene is 167039442

Identifier: 167039442

GI number: 167039442

Start: 818650

End: 819150

Strand: Reverse

Name: 167039442

Synonym: Teth514_0787

Alternate gene names: NA

Gene position: 819150-818650 (Counterclockwise)

Preceding gene: 167039456

Following gene: 167039441

Centisome position: 33.34

GC content: 31.74

Gene sequence:

>501_bases
GTGTTCAAAATACAACAGGACTTCAAAGATATCTTTGAAGAATATTATCCAAAAGTTTTAAGACAAATTTCATGGATGAT
CAAAGACGAATTCAAGGCAGAAGACATATCACAAGAAGTCTTTATAAAATTTTTTAAGAACCCTCCCCGGTACAATGAAA
ATATAGGAGGTTGGTTATCCAAAGTGGCAATAAATCATGCCTTAAATTATATCCGCAGTGAAAAAAACACAAAAATAAGA
GAACTGGAAGTTTTTAGAAACACGCAAGAGGAATTTTTTGAAGACCCTGAAGAAATAGCAATTAAAAAATTTGAAAGAGC
TAAAGTGAAAGAAGTCCTCCTAAAAATGAGTAAAAGAGATATGATGTGTCTAATACTTAAACATTCAGGATATAGTTACG
TAGAAATAGCAATATCATTGGGAATTAAGAAAACCTCCGTCGGCACAACCATAGCAAGAGCACAAAAAAAGTTTAAAGAA
TTATATGAAAAGGAGGTGTAA

Upstream 100 bases:

>100_bases
TAGTTCATGGATATAACCCCGCATGAAAAATTTCATGCGGGGTTTTTTGTCACAAAACTTGGTTTAGATGTGTTATTATT
AATGAAAAGACATAGGGAAG

Downstream 100 bases:

>100_bases
AAATGTGCTACGATGAAGGAACACTCCAAGCATATATAGACAACGAACTTGATGAAATTACAGCAAAAAATGTTGAAGAA
CATTTAAAAACCTGTGATGT

Product: RNA polymerase sigma factor SigX

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor SigX; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase ECF-Type Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-E Factor; Transcriptional Regulator LuxR Family; RNA Polymerase Sigma-24 Subunit Ecf Subfamily; RNA Polymerase Sigma Factor Sigma-70 Family; DNA-Directed RNA Polymeracialized Sigma Subunit

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MFKIQQDFKDIFEEYYPKVLRQISWMIKDEFKAEDISQEVFIKFFKNPPRYNENIGGWLSKVAINHALNYIRSEKNTKIR
ELEVFRNTQEEFFEDPEEIAIKKFERAKVKEVLLKMSKRDMMCLILKHSGYSYVEIAISLGIKKTSVGTTIARAQKKFKE
LYEKEV

Sequences:

>Translated_166_residues
MFKIQQDFKDIFEEYYPKVLRQISWMIKDEFKAEDISQEVFIKFFKNPPRYNENIGGWLSKVAINHALNYIRSEKNTKIR
ELEVFRNTQEEFFEDPEEIAIKKFERAKVKEVLLKMSKRDMMCLILKHSGYSYVEIAISLGIKKTSVGTTIARAQKKFKE
LYEKEV
>Mature_166_residues
MFKIQQDFKDIFEEYYPKVLRQISWMIKDEFKAEDISQEVFIKFFKNPPRYNENIGGWLSKVAINHALNYIRSEKNTKIR
ELEVFRNTQEEFFEDPEEIAIKKFERAKVKEVLLKMSKRDMMCLILKHSGYSYVEIAISLGIKKTSVGTTIARAQKKFKE
LYEKEV

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19849; Mature: 19849

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIQQDFKDIFEEYYPKVLRQISWMIKDEFKAEDISQEVFIKFFKNPPRYNENIGGWLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KVAINHALNYIRSEKNTKIRELEVFRNTQEEFFEDPEEIAIKKFERAKVKEVLLKMSKRD
HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
MMCLILKHSGYSYVEIAISLGIKKTSVGTTIARAQKKFKELYEKEV
CEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFKIQQDFKDIFEEYYPKVLRQISWMIKDEFKAEDISQEVFIKFFKNPPRYNENIGGWLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
KVAINHALNYIRSEKNTKIRELEVFRNTQEEFFEDPEEIAIKKFERAKVKEVLLKMSKRD
HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
MMCLILKHSGYSYVEIAISLGIKKTSVGTTIARAQKKFKELYEKEV
CEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA