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The map label for this gene is yndE [H]

Identifier: 167039456

GI number: 167039456

Start: 835071

End: 836180

Strand: Reverse

Name: yndE [H]

Synonym: Teth514_0802

Alternate gene names: 167039456

Gene position: 836180-835071 (Counterclockwise)

Preceding gene: 167039471

Following gene: 167039442

Centisome position: 34.03

GC content: 31.98

Gene sequence:

>1110_bases
ATGTTTAAAGAAACAGGACAATATGAAAGGACTTCAGAAAAGAAAATCTCTACAAAACAAATGATATTTTTATTGGTCAC
AACTGTCCTATCAACGGCAGACGTCTTTTTGCCTTCTTTTGTGGCATTAGCCGCAAAACAAGACTCTTGGATTTCTGTGG
TGATATCTTTTGTAACCTCTAGCATTGTCTTTGTTTTTTATTATAAACTGGCAATGGTCTTTAAAGAAGAAATGCTATTT
TCCTATGTAGATAAAATAACAGGAAAATTTATAGGAAAAATAATAGCTTCGCTTTATTTGTTATTTATCTTACACGGTAT
CTCTTTAGTAATGAGAGAATTAATAGAGATTATGGTCAATGCTTTTATGCCTCATACTCCCCCAATGGTTTTTTATGTAG
TCTTGATAATATCAGTAATGTACACTGTATCAAAAGGTTTTTTAGCAATTGTTAAATTAAATGAACTTTTATTTCCTTTT
GGAATGCTCCTCTTGGCATTTGTGATCACTTTGGCCCTTCCAAAAGTTAAGATGGCAAACTTTCTCCCAATACTCGAAAA
CGGGATAAAACCTCCCATAATAGGTTCAATCCTCATTACCTCTTATATGCTTGAAACGGTAATAATACTTTTTATATTCC
CTCATATCTCTAAAAAAGAAAAAGCCTTAAAAGGAGGAATAATAAGCCTTGGAATATTAGCTCTTAGCATGATGTTGGGA
GTTTTAGCAATAGGAATTTTTGGAGCAAAAACTGCATCAAACTTTCAATTTACAGCTTTGGAAATGGTGAGAAATATAAG
AATTAGCGATTATATACAGCGGTTTGATTCATTGGTAATGGCAATGTGGTTAATGGGAATTTATCTTAAAATTGTAATAT
TTACTTATCTCTTTGCAAAAGGATTAGCTGAAACAATAAAAACCCCAGACTATCGCTTTATTCTATTACCCCTTGCTACT
TTGTTAATCCCCTTAGCAGAAAATGTATCTGAAAATTTAGATGGATTGTACACTTACATACAGAGGTGTTTCCCTTTTGA
AGCCTTTTGGTTTGAAGTATTTTTCCCTATAGTTCTTTATATCATTGCGAAAATCAGAAAAATAAAATGA

Upstream 100 bases:

>100_bases
GCATTTTAAACACCTCCAGATATTATTATTTCAAGTTTTTTTTAGAATATTATGTTGGCTTTAGATAAATAATAAAAAAA
AATACGTTTAGGAGTCGGAT

Downstream 100 bases:

>100_bases
GAGGAATTAATCTGCATTCCTCTCATAGATTATTCTTAAACCTTCCAAAGTGAGCATATCATTCACCGTATTTATAGTTT
TTGACTCTTCTGCAATCATC

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MFKETGQYERTSEKKISTKQMIFLLVTTVLSTADVFLPSFVALAAKQDSWISVVISFVTSSIVFVFYYKLAMVFKEEMLF
SYVDKITGKFIGKIIASLYLLFILHGISLVMRELIEIMVNAFMPHTPPMVFYVVLIISVMYTVSKGFLAIVKLNELLFPF
GMLLLAFVITLALPKVKMANFLPILENGIKPPIIGSILITSYMLETVIILFIFPHISKKEKALKGGIISLGILALSMMLG
VLAIGIFGAKTASNFQFTALEMVRNIRISDYIQRFDSLVMAMWLMGIYLKIVIFTYLFAKGLAETIKTPDYRFILLPLAT
LLIPLAENVSENLDGLYTYIQRCFPFEAFWFEVFFPIVLYIIAKIRKIK

Sequences:

>Translated_369_residues
MFKETGQYERTSEKKISTKQMIFLLVTTVLSTADVFLPSFVALAAKQDSWISVVISFVTSSIVFVFYYKLAMVFKEEMLF
SYVDKITGKFIGKIIASLYLLFILHGISLVMRELIEIMVNAFMPHTPPMVFYVVLIISVMYTVSKGFLAIVKLNELLFPF
GMLLLAFVITLALPKVKMANFLPILENGIKPPIIGSILITSYMLETVIILFIFPHISKKEKALKGGIISLGILALSMMLG
VLAIGIFGAKTASNFQFTALEMVRNIRISDYIQRFDSLVMAMWLMGIYLKIVIFTYLFAKGLAETIKTPDYRFILLPLAT
LLIPLAENVSENLDGLYTYIQRCFPFEAFWFEVFFPIVLYIIAKIRKIK
>Mature_369_residues
MFKETGQYERTSEKKISTKQMIFLLVTTVLSTADVFLPSFVALAAKQDSWISVVISFVTSSIVFVFYYKLAMVFKEEMLF
SYVDKITGKFIGKIIASLYLLFILHGISLVMRELIEIMVNAFMPHTPPMVFYVVLIISVMYTVSKGFLAIVKLNELLFPF
GMLLLAFVITLALPKVKMANFLPILENGIKPPIIGSILITSYMLETVIILFIFPHISKKEKALKGGIISLGILALSMMLG
VLAIGIFGAKTASNFQFTALEMVRNIRISDYIQRFDSLVMAMWLMGIYLKIVIFTYLFAKGLAETIKTPDYRFILLPLAT
LLIPLAENVSENLDGLYTYIQRCFPFEAFWFEVFFPIVLYIIAKIRKIK

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41918; Mature: 41918

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKETGQYERTSEKKISTKQMIFLLVTTVLSTADVFLPSFVALAAKQDSWISVVISFVTS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SIVFVFYYKLAMVFKEEMLFSYVDKITGKFIGKIIASLYLLFILHGISLVMRELIEIMVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFMPHTPPMVFYVVLIISVMYTVSKGFLAIVKLNELLFPFGMLLLAFVITLALPKVKMAN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLPILENGIKPPIIGSILITSYMLETVIILFIFPHISKKEKALKGGIISLGILALSMMLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHH
VLAIGIFGAKTASNFQFTALEMVRNIRISDYIQRFDSLVMAMWLMGIYLKIVIFTYLFAK
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAETIKTPDYRFILLPLATLLIPLAENVSENLDGLYTYIQRCFPFEAFWFEVFFPIVLY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IIAKIRKIK
HHHHHHHCC
>Mature Secondary Structure
MFKETGQYERTSEKKISTKQMIFLLVTTVLSTADVFLPSFVALAAKQDSWISVVISFVTS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SIVFVFYYKLAMVFKEEMLFSYVDKITGKFIGKIIASLYLLFILHGISLVMRELIEIMVN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFMPHTPPMVFYVVLIISVMYTVSKGFLAIVKLNELLFPFGMLLLAFVITLALPKVKMAN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLPILENGIKPPIIGSILITSYMLETVIILFIFPHISKKEKALKGGIISLGILALSMMLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHH
VLAIGIFGAKTASNFQFTALEMVRNIRISDYIQRFDSLVMAMWLMGIYLKIVIFTYLFAK
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAETIKTPDYRFILLPLATLLIPLAENVSENLDGLYTYIQRCFPFEAFWFEVFFPIVLY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IIAKIRKIK
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]