| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039441
Identifier: 167039441
GI number: 167039441
Start: 817487
End: 818647
Strand: Reverse
Name: 167039441
Synonym: Teth514_0786
Alternate gene names: NA
Gene position: 818647-817487 (Counterclockwise)
Preceding gene: 167039442
Following gene: 167039440
Centisome position: 33.32
GC content: 32.21
Gene sequence:
>1161_bases ATGTGCTACGATGAAGGAACACTCCAAGCATATATAGACAACGAACTTGATGAAATTACAGCAAAAAATGTTGAAGAACA TTTAAAAACCTGTGATGTATGCAGAGAAAAATTAGAAGAATTAAAGTCTATAAATGAATTTACCTCAAAAGCTTTAGAAA CTACTAATATAGACTTAAATGAAGCATGGGCAAGTTTTAATGAAAAATTGAGTGAAAATAATAAAAAAGGAGGAATTTTT GCCATGTTTACAAAATACAAAAAAGCTATTGCTGCTGCCATTGTAATTGCATTTATAGCTGCCTCAGTATTTTTCCCACC CCTTAAAAATGTAGAAGCTAAACTTTTAAACCTTCTAAGGCTTAACAAGATGCAGGTAATAACAATAACTCCTGATGATA TGAGGCAAATTCAAAATGAGTTTTACAGAAGAGATATAAAAAATATTGACTTAAAGGAATATGGAGAAATATTAAAAAAT GGAGGTCCTGAAGGATATGATGTATCCCCAAATGAAATTGACAAATTAAAATCTATGGTGGATTATGAAATTAAGCTCCC GACAGATAGCAATTTCGAAATAGAACACATTTATGTAGGAAAAGATCAGGGTTTTGAATTTGTACTCAATATCGACAAAA TTAATGAGCTCATTAAAACATTTGGAGGAACACATCTATTCCCTTCAGAACTCAATAAAAAACCTGTAATTTTAAACATC GGCAAAACAGTTAATATCTCCATGAAAGACAAAAATGCTTCAGAAAATTATAGAGGCATACACATTTCAATAAACAAAGC TCCTGAAGTGATAGTACCAGAAGGAGTAGATGTGGATAAAGTAATAGATGCTTTGGCTAACTTACCCTTTTTACCTGACC ATTTGAAAAAACAGATTGCAGATGTAAACAACTGGAAAGAAACTTTGCCTATACCTATCACTGAAGCACAAAGCGTCCAA GAAATAAACATAAGAGGCAACAAAGCCTTCTTAATCACAAGTAAGTATTCTCCTGATACGGTTACACTTGCTTGGAATGA AAATGGAGTAATGTATGCCTTGTCTATGTTCGGTACAAGTTCTTCTCCTGAAAAAACAGATCCACAGATTAGGGATGTAA ATATTAATACCTTAATTCAAATTGCAAATTCAATGAGGTGA
Upstream 100 bases:
>100_bases AAATAGCAATATCATTGGGAATTAAGAAAACCTCCGTCGGCACAACCATAGCAAGAGCACAAAAAAAGTTTAAAGAATTA TATGAAAAGGAGGTGTAAAA
Downstream 100 bases:
>100_bases TTAAATGGTTTTAGAAACACGAAATCTCACAAAACAGTTTAATGGAAAAGGCGGCTTTAAAGAAGTCACACTCTCTGTAG AAAAAGGGCAGGTTTTTGGA
Product: putative transmembrane anti-sigma factor
Products: NA
Alternate protein names: Transmembrane Transcriptional Regulator
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MCYDEGTLQAYIDNELDEITAKNVEEHLKTCDVCREKLEELKSINEFTSKALETTNIDLNEAWASFNEKLSENNKKGGIF AMFTKYKKAIAAAIVIAFIAASVFFPPLKNVEAKLLNLLRLNKMQVITITPDDMRQIQNEFYRRDIKNIDLKEYGEILKN GGPEGYDVSPNEIDKLKSMVDYEIKLPTDSNFEIEHIYVGKDQGFEFVLNIDKINELIKTFGGTHLFPSELNKKPVILNI GKTVNISMKDKNASENYRGIHISINKAPEVIVPEGVDVDKVIDALANLPFLPDHLKKQIADVNNWKETLPIPITEAQSVQ EINIRGNKAFLITSKYSPDTVTLAWNENGVMYALSMFGTSSSPEKTDPQIRDVNINTLIQIANSMR
Sequences:
>Translated_386_residues MCYDEGTLQAYIDNELDEITAKNVEEHLKTCDVCREKLEELKSINEFTSKALETTNIDLNEAWASFNEKLSENNKKGGIF AMFTKYKKAIAAAIVIAFIAASVFFPPLKNVEAKLLNLLRLNKMQVITITPDDMRQIQNEFYRRDIKNIDLKEYGEILKN GGPEGYDVSPNEIDKLKSMVDYEIKLPTDSNFEIEHIYVGKDQGFEFVLNIDKINELIKTFGGTHLFPSELNKKPVILNI GKTVNISMKDKNASENYRGIHISINKAPEVIVPEGVDVDKVIDALANLPFLPDHLKKQIADVNNWKETLPIPITEAQSVQ EINIRGNKAFLITSKYSPDTVTLAWNENGVMYALSMFGTSSSPEKTDPQIRDVNINTLIQIANSMR >Mature_386_residues MCYDEGTLQAYIDNELDEITAKNVEEHLKTCDVCREKLEELKSINEFTSKALETTNIDLNEAWASFNEKLSENNKKGGIF AMFTKYKKAIAAAIVIAFIAASVFFPPLKNVEAKLLNLLRLNKMQVITITPDDMRQIQNEFYRRDIKNIDLKEYGEILKN GGPEGYDVSPNEIDKLKSMVDYEIKLPTDSNFEIEHIYVGKDQGFEFVLNIDKINELIKTFGGTHLFPSELNKKPVILNI GKTVNISMKDKNASENYRGIHISINKAPEVIVPEGVDVDKVIDALANLPFLPDHLKKQIADVNNWKETLPIPITEAQSVQ EINIRGNKAFLITSKYSPDTVTLAWNENGVMYALSMFGTSSSPEKTDPQIRDVNINTLIQIANSMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43626; Mature: 43626
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCYDEGTLQAYIDNELDEITAKNVEEHLKTCDVCREKLEELKSINEFTSKALETTNIDLN CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EAWASFNEKLSENNKKGGIFAMFTKYKKAIAAAIVIAFIAASVFFPPLKNVEAKLLNLLR HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LNKMQVITITPDDMRQIQNEFYRRDIKNIDLKEYGEILKNGGPEGYDVSPNEIDKLKSMV CCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH DYEIKLPTDSNFEIEHIYVGKDQGFEFVLNIDKINELIKTFGGTHLFPSELNKKPVILNI CEEEECCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHCCCCCEEEEC GKTVNISMKDKNASENYRGIHISINKAPEVIVPEGVDVDKVIDALANLPFLPDHLKKQIA CCEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHH DVNNWKETLPIPITEAQSVQEINIRGNKAFLITSKYSPDTVTLAWNENGVMYALSMFGTS HCCCHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEEECCCC SSPEKTDPQIRDVNINTLIQIANSMR CCCCCCCCCEEECCHHHHHHHHHHCC >Mature Secondary Structure MCYDEGTLQAYIDNELDEITAKNVEEHLKTCDVCREKLEELKSINEFTSKALETTNIDLN CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH EAWASFNEKLSENNKKGGIFAMFTKYKKAIAAAIVIAFIAASVFFPPLKNVEAKLLNLLR HHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LNKMQVITITPDDMRQIQNEFYRRDIKNIDLKEYGEILKNGGPEGYDVSPNEIDKLKSMV CCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH DYEIKLPTDSNFEIEHIYVGKDQGFEFVLNIDKINELIKTFGGTHLFPSELNKKPVILNI CEEEECCCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCHHHCCCCCEEEEC GKTVNISMKDKNASENYRGIHISINKAPEVIVPEGVDVDKVIDALANLPFLPDHLKKQIA CCEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHH DVNNWKETLPIPITEAQSVQEINIRGNKAFLITSKYSPDTVTLAWNENGVMYALSMFGTS HCCCHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEECCCCEEEEEEECCCC SSPEKTDPQIRDVNINTLIQIANSMR CCCCCCCCCEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA