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The map label for this gene is deoB

Identifier: 167039069

GI number: 167039069

Start: 417499

End: 418668

Strand: Direct

Name: deoB

Synonym: Teth514_0408

Alternate gene names: 167039069

Gene position: 417499-418668 (Clockwise)

Preceding gene: 167039068

Following gene: 167039070

Centisome position: 16.99

GC content: 37.18

Gene sequence:

>1170_bases
ATGTTCAAAAGAGTCATACTAATAGTTTTGGATAGCGTAGGAGTAGGAGAATTGCCAGACGCTTATAAGTTTGGGGATGA
AGGTTCAAACACCTTAGGCCATGTGACAGAAAAGACAGGTGTTGAACTTCCTAATATGGGGCGATTAGGGCTAGGGAATA
TAATTCCTTTAAAAAGCGTTCCTGAAAACCCTAACGCTATTTGTGGATATGGCAAGATGGCTGAAAAATCAGCAGGGAAA
GATACTACTACAGGTCATTGGGAGATAGCAGGACTCTTTATTGAGAAACCTTTCCCTACTTATCCCCATGGTTTTCCTGA
TGAAATTATCAAGGAATTTGAAAAAAGAATTGGTAGAAAAGTTTTGGGAAATAAGCCTGCTTCAGGTACGGAAATAATAA
AAGAGCTGGGAGAAGAACATGTAAAAACAGGATATCCTATAGTTTATACTTCTGCTGATAGCGTATTTCAAGTAGCAGCC
CATGAGAATGTCATACCTCTTGAAGAGCTTTATAGAATTTGTGAAATTGCCAGGGAAATACTAAAAGGAGACCATGCGGT
AGGAAGAGTCATTGCAAGGCCTTTTACCGGTACTCCTGGAAATTTTGTGAGAACAGGAAATAGGAGAGATTTTTCGTTAA
AGCCTTTTGAGCCTACTATATTAGATATGTTAAAAGAAGATGGATATGAGGTTTTTGCTATAGGAAAGATTGAGGATATT
TTTGCTGGGCAAGGAATTACTGGGAAAAATCATACGACAAACAATGACGAGGGCATTACAGCTACTATAAAAGCGATGGA
TGAAATTAAAAATGGGTTAATTTTCACAAATTTAGTTGATTTTGATATGTTGTATGGCCATAGAAATGATGTAGAAGGAT
ATGCAAAAGCTTTGAAACATTTTGATAACAGACTTCCAGAAATTATGGAAAAACTCACAAAGGAAGATTTACTAATTATA
ACTGCTGACCATGGTTGTGACCCTACTACTGAAAGCACAGACCATTCAAGGGAATATGTGCCACTATTAGTTTATAGTCC
TTTAATGAAACATGGAGTTAATTTAGGAGTAAGGAGCACATATGCAGATATTGCTGCCACAATAGCTGAAACATTCAGGG
TTGGTCCTACAAAGCATGGCACATCTTTCTTGAAGGAATTACCTTTATGA

Upstream 100 bases:

>100_bases
ATTATGCTGTTGTCACTGTTAAAGATTTGTTGCCAGGTGCTTTTACCTCAAAAGATTTAGAGAAATAATACGGACATAAG
TTCATAGAAGAGGTGGTAAA

Downstream 100 bases:

>100_bases
GTGGGGGTATGATTTATGCGGATGTATGACCTTATAATGAAAAAGAGAGACGGTGGAGTTCTTACAAAAGAAGAGATTGA
TTTTATAATCTCTTCTTATA

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MFKRVILIVLDSVGVGELPDAYKFGDEGSNTLGHVTEKTGVELPNMGRLGLGNIIPLKSVPENPNAICGYGKMAEKSAGK
DTTTGHWEIAGLFIEKPFPTYPHGFPDEIIKEFEKRIGRKVLGNKPASGTEIIKELGEEHVKTGYPIVYTSADSVFQVAA
HENVIPLEELYRICEIAREILKGDHAVGRVIARPFTGTPGNFVRTGNRRDFSLKPFEPTILDMLKEDGYEVFAIGKIEDI
FAGQGITGKNHTTNNDEGITATIKAMDEIKNGLIFTNLVDFDMLYGHRNDVEGYAKALKHFDNRLPEIMEKLTKEDLLII
TADHGCDPTTESTDHSREYVPLLVYSPLMKHGVNLGVRSTYADIAATIAETFRVGPTKHGTSFLKELPL

Sequences:

>Translated_389_residues
MFKRVILIVLDSVGVGELPDAYKFGDEGSNTLGHVTEKTGVELPNMGRLGLGNIIPLKSVPENPNAICGYGKMAEKSAGK
DTTTGHWEIAGLFIEKPFPTYPHGFPDEIIKEFEKRIGRKVLGNKPASGTEIIKELGEEHVKTGYPIVYTSADSVFQVAA
HENVIPLEELYRICEIAREILKGDHAVGRVIARPFTGTPGNFVRTGNRRDFSLKPFEPTILDMLKEDGYEVFAIGKIEDI
FAGQGITGKNHTTNNDEGITATIKAMDEIKNGLIFTNLVDFDMLYGHRNDVEGYAKALKHFDNRLPEIMEKLTKEDLLII
TADHGCDPTTESTDHSREYVPLLVYSPLMKHGVNLGVRSTYADIAATIAETFRVGPTKHGTSFLKELPL
>Mature_389_residues
MFKRVILIVLDSVGVGELPDAYKFGDEGSNTLGHVTEKTGVELPNMGRLGLGNIIPLKSVPENPNAICGYGKMAEKSAGK
DTTTGHWEIAGLFIEKPFPTYPHGFPDEIIKEFEKRIGRKVLGNKPASGTEIIKELGEEHVKTGYPIVYTSADSVFQVAA
HENVIPLEELYRICEIAREILKGDHAVGRVIARPFTGTPGNFVRTGNRRDFSLKPFEPTILDMLKEDGYEVFAIGKIEDI
FAGQGITGKNHTTNNDEGITATIKAMDEIKNGLIFTNLVDFDMLYGHRNDVEGYAKALKHFDNRLPEIMEKLTKEDLLII
TADHGCDPTTESTDHSREYVPLLVYSPLMKHGVNLGVRSTYADIAATIAETFRVGPTKHGTSFLKELPL

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=409, Percent_Identity=47.4327628361858, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI1789781, Length=433, Percent_Identity=27.9445727482679, Blast_Score=131, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_THEP3 (B0KCA9)

Other databases:

- EMBL:   CP000924
- RefSeq:   YP_001665799.1
- ProteinModelPortal:   B0KCA9
- SMR:   B0KCA9
- GeneID:   5874454
- GenomeReviews:   CP000924_GR
- KEGG:   tpd:Teth39_1827
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- ProtClustDB:   PRK05362
- BioCyc:   TPSE340099:TETH39_1827-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 42943; Mature: 42943

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRVILIVLDSVGVGELPDAYKFGDEGSNTLGHVTEKTGVELPNMGRLGLGNIIPLKSV
CCCEEEEEEECCCCCCCCCCHHHCCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
PENPNAICGYGKMAEKSAGKDTTTGHWEIAGLFIEKPFPTYPHGFPDEIIKEFEKRIGRK
CCCCCCEECCCCHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
VLGNKPASGTEIIKELGEEHVKTGYPIVYTSADSVFQVAAHENVIPLEELYRICEIAREI
HHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
LKGDHAVGRVIARPFTGTPGNFVRTGNRRDFSLKPFEPTILDMLKEDGYEVFAIGKIEDI
HCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHH
FAGQGITGKNHTTNNDEGITATIKAMDEIKNGLIFTNLVDFDMLYGHRNDVEGYAKALKH
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCHHHHHHHHHH
FDNRLPEIMEKLTKEDLLIITADHGCDPTTESTDHSREYVPLLVYSPLMKHGVNLGVRST
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
YADIAATIAETFRVGPTKHGTSFLKELPL
HHHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MFKRVILIVLDSVGVGELPDAYKFGDEGSNTLGHVTEKTGVELPNMGRLGLGNIIPLKSV
CCCEEEEEEECCCCCCCCCCHHHCCCCCCCCHHCCHHHCCCCCCCCCCCCCCCCCCCCCC
PENPNAICGYGKMAEKSAGKDTTTGHWEIAGLFIEKPFPTYPHGFPDEIIKEFEKRIGRK
CCCCCCEECCCCHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
VLGNKPASGTEIIKELGEEHVKTGYPIVYTSADSVFQVAAHENVIPLEELYRICEIAREI
HHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
LKGDHAVGRVIARPFTGTPGNFVRTGNRRDFSLKPFEPTILDMLKEDGYEVFAIGKIEDI
HCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHH
FAGQGITGKNHTTNNDEGITATIKAMDEIKNGLIFTNLVDFDMLYGHRNDVEGYAKALKH
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCHHHHHHHHHH
FDNRLPEIMEKLTKEDLLIITADHGCDPTTESTDHSREYVPLLVYSPLMKHGVNLGVRST
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
YADIAATIAETFRVGPTKHGTSFLKELPL
HHHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA