| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is zupT [H]
Identifier: 167038768
GI number: 167038768
Start: 93713
End: 94432
Strand: Direct
Name: zupT [H]
Synonym: Teth514_0095
Alternate gene names: 167038768
Gene position: 93713-94432 (Clockwise)
Preceding gene: 167038767
Following gene: 167038769
Centisome position: 3.81
GC content: 38.06
Gene sequence:
>720_bases ATGTCTGCCTTCAATGGGATGATAATAGGCTCTTTGGTCGGAATAATCGGTACGGGAATGGGGGGAGCTGCGACATATTT TTTAAAAAACCCTTCTAATAGATTTTTTAGTGGGATTATGGGGATTACTGCGGGCTTGATGCTCTCTATTGTAGTTTTTG ACCTGTTGCCTCATGCTTTTGATATAGCAGGTCTTGCATTGGGGACAATTGGGATATTAATAGGAGCTATTTTGATTTCT TTTTTTGACATGATAATAGAAAATATGGATATCGCTGGAGGCTTCATAAAAGAAGGTGTATTATTAGGAATTGCAATTGC TTTACATAATTTTCCTGAGGGACTTGCAGTGGGCTCTGGTTTTATGGTATCTCAGTCATTAGGTATTAACATCGCATTGG TTATTGCTTTGCACGATTTTCCTGAGGGTTTAGCAATGGCAACGCCATTTTCTGCAGGCGGCATACCTCCTTATAAAAAT GTAATATACACCGTATTAGCTGGGATTCCTACAGGAATAGGGGCTTTAATTGGAGTTTTGACGGGTGGTATATCCCCTTA TTTTATTGGATTAAATTTAGGCATAGCAGGAGGAGCTATGTTGTATGTGACCTGTGGCGATGTAATTCCTGAGGCCAGAA ATATTTACAAAGGGAAAATTTCTATTTTGGGGATGATATTAGGTTTTATTGGTGGTATAATAATAACAAAGTATTTGTAA
Upstream 100 bases:
>100_bases ATGGTCCTCCTACCTTCGAGCGAATTTTTTTGTGCTAAGCATAAGTTCAATAACGATTTAATACATTTGAAGTAGATTTA AAAATTAAGGGGATGTTTTT
Downstream 100 bases:
>100_bases GTTTTGTTTATGCAGGGAGTGCCTTAAATGACAAAAATAGTACGTGTTAATAAAAATAATCCAGAAATTGAGCTTATTGA TTTTGCAGCAAAAGTGATAA
Product: zinc/iron permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSAFNGMIIGSLVGIIGTGMGGAATYFLKNPSNRFFSGIMGITAGLMLSIVVFDLLPHAFDIAGLALGTIGILIGAILIS FFDMIIENMDIAGGFIKEGVLLGIAIALHNFPEGLAVGSGFMVSQSLGINIALVIALHDFPEGLAMATPFSAGGIPPYKN VIYTVLAGIPTGIGALIGVLTGGISPYFIGLNLGIAGGAMLYVTCGDVIPEARNIYKGKISILGMILGFIGGIIITKYL
Sequences:
>Translated_239_residues MSAFNGMIIGSLVGIIGTGMGGAATYFLKNPSNRFFSGIMGITAGLMLSIVVFDLLPHAFDIAGLALGTIGILIGAILIS FFDMIIENMDIAGGFIKEGVLLGIAIALHNFPEGLAVGSGFMVSQSLGINIALVIALHDFPEGLAMATPFSAGGIPPYKN VIYTVLAGIPTGIGALIGVLTGGISPYFIGLNLGIAGGAMLYVTCGDVIPEARNIYKGKISILGMILGFIGGIIITKYL >Mature_238_residues SAFNGMIIGSLVGIIGTGMGGAATYFLKNPSNRFFSGIMGITAGLMLSIVVFDLLPHAFDIAGLALGTIGILIGAILISF FDMIIENMDIAGGFIKEGVLLGIAIALHNFPEGLAVGSGFMVSQSLGINIALVIALHDFPEGLAMATPFSAGGIPPYKNV IYTVLAGIPTGIGALIGVLTGGISPYFIGLNLGIAGGAMLYVTCGDVIPEARNIYKGKISILGMILGFIGGIIITKYL
Specific function: Mediates zinc uptake. May also transport other divalent cations [H]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily [H]
Homologues:
Organism=Homo sapiens, GI229577418, Length=149, Percent_Identity=36.9127516778523, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI229577422, Length=149, Percent_Identity=36.9127516778523, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1789419, Length=227, Percent_Identity=30.8370044052863, Blast_Score=74, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17507805, Length=157, Percent_Identity=36.9426751592357, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24652846, Length=141, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 24487; Mature: 24356
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFNGMIIGSLVGIIGTGMGGAATYFLKNPSNRFFSGIMGITAGLMLSIVVFDLLPHAF CCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIAGLALGTIGILIGAILISFFDMIIENMDIAGGFIKEGVLLGIAIALHNFPEGLAVGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC FMVSQSLGINIALVIALHDFPEGLAMATPFSAGGIPPYKNVIYTVLAGIPTGIGALIGVL EEEECCCCCEEEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH TGGISPYFIGLNLGIAGGAMLYVTCGDVIPEARNIYKGKISILGMILGFIGGIIITKYL HCCCCCEEEEEEECCCCCEEEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAFNGMIIGSLVGIIGTGMGGAATYFLKNPSNRFFSGIMGITAGLMLSIVVFDLLPHAF CCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIAGLALGTIGILIGAILISFFDMIIENMDIAGGFIKEGVLLGIAIALHNFPEGLAVGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC FMVSQSLGINIALVIALHDFPEGLAMATPFSAGGIPPYKNVIYTVLAGIPTGIGALIGVL EEEECCCCCEEEEEEEEECCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH TGGISPYFIGLNLGIAGGAMLYVTCGDVIPEARNIYKGKISILGMILGFIGGIIITKYL HCCCCCEEEEEEECCCCCEEEEEECCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA