| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is metG [H]
Identifier: 167038739
GI number: 167038739
Start: 67845
End: 69743
Strand: Direct
Name: metG [H]
Synonym: Teth514_0066
Alternate gene names: 167038739
Gene position: 67845-69743 (Clockwise)
Preceding gene: 167038738
Following gene: 167038740
Centisome position: 2.76
GC content: 35.76
Gene sequence:
>1899_bases ATGAAAAAGACTTTTTACATTACGACACCTATCTATTATCCCAGTGATAAATTACATATTGGTCATTCATATACTACTGT TGCTGCAGATGCGATGGCAAGATTTAAAAGGCTTACCGGATACGATGTCAAGTTTTTGACTGGTACTGATGAACATGGGC AAAAAATTCAAAGAATAGCCAGAGAAAAAGGGATGTCTCCTAAAGAATATGTAGATGGGATAGTTGAATGGATAAAAGAT TTATGGAAGATAATGGATATAAGTTATGACCAATTTATTCGCACAACTGATAAATATCATGAGGAAATAGTACAAAAAAT ATTCACGAAATTATATGAAAAAGGAGATATATACAAGAGCAAATATGAAGGATGGTACTGTACTCCTTGTGAATCTTTCT GGACTGAGAGCCAGCTTGTAGATGGGAAATGCCCAGACTGTGGTAGACAAGTAGAAAGGGTAAAAGAAGAAGGGTATTTC TTTAGATTGTCTAAATATGGGGATAGGCTGTTACAATATTACGATGAACATCCTGATTTTATACAGCCAGAGTCAAGACG CAATGAGATGATAAACTTTATAAAATCAGGTTTGGAGGATTTATTTGTTTCAAGGAGTTCGTTTGACTGGGGTATAAAGG TACCTTTTGACCCAAAACATGTGATTTATGTTTGGATAGATGCTTTGTCAAATTACATAACTGCCTTAGGATATTCTACA GACCATGACGACGATTTTAAAAAATACTGGCCAGCAGATGTTCATTTGGTTGGAAAAGAGATAATGAGGTTCCACACAAT AATATGGCCAGCAATGCTTATGGCTCTTGACTTGCCTCTTCCTAAAAAAGTGTTTGGACACGGTTGGCTTATACTGGAAG GAGGCAAGATGTCAAAATCTAAAGGTAATGTAGTAGACCCTAAAGAGTTAGTTAGTAAATATGGTGTAGATGCTGTAAGA TATTTTCTTTTGAGAGAAGTTCCTTTTGGGGCGGATGGAGTGTTTTCTAACGAAGCTTTAATAAATAGAATAAATTCAGA CCTTGCTAATGACCTTGGAAACTTGCTGAGTAGGACTGTTACAATGATTGAAAAATACTTTGGAGGCATTCTGCCAAAAC CTTCACAAAAAGAAGAGGTAGATGATGACCTTATAACTACTGCACAGAATCTGCCGAAAACCGTTGAGGAGTATATGGAT AAACTTCAGTTTTCCAACGCTTTAATTGAAATATGGAAATTGGTAAGACGAGCGAATAAATATATCGATGAAACGATGCC TTGGGTTTTAGCTAAAGATGAAAGCAAAAAGGAAAGATTAGGTACAGTTTTATATAATTTGACGGAAGCTTTGAGGTTTA TTGCAGTACTTATATCTCCTTTTATGCCCAATACTCCAAAAAAAATCTTCGAGCAGTTAGGAGTAGAAGAGAATTTAACT ACTTGGGAAAGCTTAAAATTTGGCCTGTTAAAGGAAGGCACAAAGGTGAAAAGGGGAGAAATTATATTCCCAAGGATAGA TGTAAAGAAGGAACTGGTTGCTATAGAAGAAAAAGCAAAGGAAGAGAAAAAGATAGATTACATCACTATTGAAGAGTTTG CAAAAATTCAGTTGAGAGTAGCTGAAATTTTAGAAGCAGAAAGAGTGGAAGGTTCTGACAAACTTATAAAGATGAAGCTT AAAGTGGGAGAAGAAATAAGACAAATTGTGGGAGGAATTGGTCGCCATTATGCTCCTAAAGAGCTTGTAGGAAAGAAAAT AATTATTGTATATAATCTGGAGCCAAAGAAACTAAAGGGTATTGAATCTCAAGGAATGCTTTTGGCAGCATCTACCGAAG GAAAAATGTCTCTTCTTACGGTAGACAGGGATATAGAAAGTGGGGCAAAGATAAGCTAA
Upstream 100 bases:
>100_bases CATGCGTCGTGAGGTGTATGCGAAGAAGGGTGGTACCGCGACAATCTCGCCCCTTATGTGGAGGCGAGTTTTTTATTTAC AAAAAAAGAGGAGGATGGAT
Downstream 100 bases:
>100_bases GGAGTGATAAAATTGTTGGTGGATTCTCACGCTCATCTTGAAGATGAGAAATACGATAAAGATAGAGAAGAAGTTATTGA AGAATGCAAAAAAGATCTCA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 632; Mature: 632
Protein sequence:
>632_residues MKKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAREKGMSPKEYVDGIVEWIKD LWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSKYEGWYCTPCESFWTESQLVDGKCPDCGRQVERVKEEGYF FRLSKYGDRLLQYYDEHPDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYST DHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSKSKGNVVDPKELVSKYGVDAVR YFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMIEKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMD KLQFSNALIEIWKLVRRANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEENLT TWESLKFGLLKEGTKVKRGEIIFPRIDVKKELVAIEEKAKEEKKIDYITIEEFAKIQLRVAEILEAERVEGSDKLIKMKL KVGEEIRQIVGGIGRHYAPKELVGKKIIIVYNLEPKKLKGIESQGMLLAASTEGKMSLLTVDRDIESGAKIS
Sequences:
>Translated_632_residues MKKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAREKGMSPKEYVDGIVEWIKD LWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSKYEGWYCTPCESFWTESQLVDGKCPDCGRQVERVKEEGYF FRLSKYGDRLLQYYDEHPDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYST DHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSKSKGNVVDPKELVSKYGVDAVR YFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMIEKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMD KLQFSNALIEIWKLVRRANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEENLT TWESLKFGLLKEGTKVKRGEIIFPRIDVKKELVAIEEKAKEEKKIDYITIEEFAKIQLRVAEILEAERVEGSDKLIKMKL KVGEEIRQIVGGIGRHYAPKELVGKKIIIVYNLEPKKLKGIESQGMLLAASTEGKMSLLTVDRDIESGAKIS >Mature_632_residues MKKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIAREKGMSPKEYVDGIVEWIKD LWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSKYEGWYCTPCESFWTESQLVDGKCPDCGRQVERVKEEGYF FRLSKYGDRLLQYYDEHPDFIQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYST DHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSKSKGNVVDPKELVSKYGVDAVR YFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMIEKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMD KLQFSNALIEIWKLVRRANKYIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEENLT TWESLKFGLLKEGTKVKRGEIIFPRIDVKKELVAIEEKAKEEKKIDYITIEEFAKIQLRVAEILEAERVEGSDKLIKMKL KVGEEIRQIVGGIGRHYAPKELVGKKIIIVYNLEPKKLKGIESQGMLLAASTEGKMSLLTVDRDIESGAKIS
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=542, Percent_Identity=35.239852398524, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI14043022, Length=524, Percent_Identity=27.0992366412214, Blast_Score=180, Evalue=4e-45, Organism=Escherichia coli, GI1788432, Length=687, Percent_Identity=28.82096069869, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1786861, Length=192, Percent_Identity=28.6458333333333, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1789455, Length=109, Percent_Identity=32.1100917431193, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI212645096, Length=513, Percent_Identity=34.5029239766082, Blast_Score=291, Evalue=7e-79, Organism=Caenorhabditis elegans, GI71992781, Length=403, Percent_Identity=33.2506203473945, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17540794, Length=555, Percent_Identity=27.027027027027, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71997510, Length=168, Percent_Identity=32.1428571428571, Blast_Score=75, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71997517, Length=168, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321610, Length=535, Percent_Identity=32.1495327102804, Blast_Score=270, Evalue=5e-73, Organism=Saccharomyces cerevisiae, GI6321704, Length=556, Percent_Identity=25.3597122302158, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6323414, Length=178, Percent_Identity=26.9662921348315, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21358483, Length=504, Percent_Identity=33.531746031746, Blast_Score=294, Evalue=1e-79, Organism=Drosophila melanogaster, GI24655311, Length=557, Percent_Identity=26.3913824057451, Blast_Score=182, Evalue=4e-46,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 72969; Mature: 72969
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS50886 TRBD ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIA CCCEEEEECCEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH REKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKS HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH KYEGWYCTPCESFWTESQLVDGKCPDCGRQVERVKEEGYFFRLSKYGDRLLQYYDEHPDF HCCCEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCC IQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYST CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHHCCCC DHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSKS CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCCC KGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTV CCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TMIEKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANK HHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEENLT HHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC TWESLKFGLLKEGTKVKRGEIIFPRIDVKKELVAIEEKAKEEKKIDYITIEEFAKIQLRV HHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH AEILEAERVEGSDKLIKMKLKVGEEIRQIVGGIGRHYAPKELVGKKIIIVYNLEPKKLKG HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCHHHHCC IESQGMLLAASTEGKMSLLTVDRDIESGAKIS CCCCCEEEEECCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKKTFYITTPIYYPSDKLHIGHSYTTVAADAMARFKRLTGYDVKFLTGTDEHGQKIQRIA CCCEEEEECCEECCCCCEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH REKGMSPKEYVDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKS HHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH KYEGWYCTPCESFWTESQLVDGKCPDCGRQVERVKEEGYFFRLSKYGDRLLQYYDEHPDF HCCCEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCC IQPESRRNEMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYST CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEHHHHHHHHHHHCCCC DHDDDFKKYWPADVHLVGKEIMRFHTIIWPAMLMALDLPLPKKVFGHGWLILEGGKMSKS CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEECCCCCCC KGNVVDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTV CCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TMIEKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANK HHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIDETMPWVLAKDESKKERLGTVLYNLTEALRFIAVLISPFMPNTPKKIFEQLGVEENLT HHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC TWESLKFGLLKEGTKVKRGEIIFPRIDVKKELVAIEEKAKEEKKIDYITIEEFAKIQLRV HHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH AEILEAERVEGSDKLIKMKLKVGEEIRQIVGGIGRHYAPKELVGKKIIIVYNLEPKKLKG HHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEECCHHHHCC IESQGMLLAASTEGKMSLLTVDRDIESGAKIS CCCCCEEEEECCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]