Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is 167038706

Identifier: 167038706

GI number: 167038706

Start: 35952

End: 37850

Strand: Direct

Name: 167038706

Synonym: Teth514_0032

Alternate gene names: NA

Gene position: 35952-37850 (Clockwise)

Preceding gene: 167038705

Following gene: 167038707

Centisome position: 1.46

GC content: 30.17

Gene sequence:

>1899_bases
ATGTTTAAAAGAAATTATAATACACGGATATTTTTTGTTTTATTTGGGATTTCTGTAATTGTTTTCTCATTGTCATTAGC
TTATTTTTTGTCAGGGTTTGAAAATAGAGTTTTTATAGGGGGAATAATTTTATTAATTTCGCTGGGGTTATCGAGTTTTT
TATCTAAAAAATTGTCTGAACCTATTGAAAAATTAAACGAAGCTGTTAAAAGGATTTCTCGGGGGGATTTTGATTATCAG
TTAAATATTACTGATTCAAAAGAGCTTAGAGAACTTTCAGAGAATTTTAATTCCATGGCTAGAGACTTATCTCAAAGTTA
TAAAAAATTAAAAGAACAAACAGAAAGTTTAATACAACAAAATGAAGAATTACAGGAGTTTAACGCGGAATTAGAAGCTT
CCTACGAGCAATTAGAGGCTTTGACTCATGAATTAGAAATTTCTGAAAGAAAGTATCGATTGTTAGTAGAGAATATTCGG
GATATTTTGTGGGTGACTGATAAAAATTTTATTATTGAATTTGTCAATTCACGAGTTATAAGGTATTTAAATTATACTCC
GCACGAATTGATAGGAAAAAGCATTTTTGAAATTGTAGATGAAGACAGCAGAGAAATCTTGAAAAACATGATGGAAGGTA
AAATTAATTTTTCAGAAATCAATTTTAAAAGCAAAGAAGGCTTATTGGTTATAACAGAAACCTATGTTAAAAGGCTAAAA
ATTGATGAAGAAGTGGTAGGCATTCAAGGCATTTCTCGAGATATTACAGAAATATATTATGTAAAAAAACAGATAGCTGA
AAAGAATAATGAAATATTGGCTATTAGTGATGTAGGAAAGCTACTTACATCGGGAAGTGACATAAAAGAGGTATTGAATA
ACATAGTAGAAAAAGTTGCTGAATTGTTAAATTCACCTTTGTGCACTATAAGAGAATATAATCCGTATTTTCATAAGTTT
GTTTTACTTGTAAAAGGGGGAGAATTAAAAGATTATCCTGTCTCTGAAGAAATTAAATTATCAGAAGAGGACATAAATGA
ATTAGTAAATCTAAAAGAAATAAAAATAAAAGATATAGAAGAGTTTCCTTGTAGTGAAAAAATAACACCTATTTTTGCAG
CTAAAGATGTTTATTCAGTTGTGATAGTGCCTTTAATTTTTAGAAATGAAACTAAGGGAATTTTAACAGTTTGGACTGCA
ACAAATACGGTCAAAAATATGAGTTTATTGAGATCTATTGCCAGCGCAGTGTCTGTGGCAATTGAAAATTCCAAACTGTA
TGACGAGATTAAAAAAGTCTATATAAAGACTATAGAAGCTTTAGCTTATGCAATGGAAGCAAAGGATTTATATACGAAAG
GACATTCTATGAGAGTATCTCAATATGCTGTTTTAATAGGGGAATATATGGGCTTTTCAAGGGAAAAAATAGAACAATTA
AGGATTGCAGGGATATTACATGATATAGGAAAGATAGGTATATCTGATACTATTCTTCTAAAGAAAGGCAAACTCTTGGA
AGAAGAGTATAACGTTATAAAAAGTCATCCAGAGATATCAAAAAAAATTTTAATGCCTATAGATCTGCCGAAAGAAATAT
TAGAAGCTATTTCCAAACACCATGAACGATATGATGGGAAAGGTTATCCTTATGGTTTAAAAGGCGAAGAAATCCCTATA
GAAGCAGCAATTCTTGGTGTGGCTGATGCCTTTGACGCGATGACTTCTGATAGAGCTTATAGAAAAGGAATGACTATTGA
AGAAGCTATTAATGAGCTTTTAAAATATAAAGGAACACAATTCCATCCTGAAGTGGTAGATGCCTTTATTTCTCTTTACA
TGAATGAAAAACACAGACTAGAAGAGATAAAAAATCAAGTTTTTTCAAATGCTTCTTAA

Upstream 100 bases:

>100_bases
TCTTATTATTTTTTATAACTTTTACTTAAAATTTGAAGGCTTTTAGCCGAAATAAATATAGGGAACTTATTCTTACAAAA
GAAAAGAGATGGAGGATAGT

Downstream 100 bases:

>100_bases
GAGATATAGAAATATCTCTTTTTTTTTGTTACAATTGAATATAACGAGGTGTTAAAGTATGTATCAGTCTTTATATAGGA
AGTACAGGCCCAAAAGCTTT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MFKRNYNTRIFFVLFGISVIVFSLSLAYFLSGFENRVFIGGIILLISLGLSSFLSKKLSEPIEKLNEAVKRISRGDFDYQ
LNITDSKELRELSENFNSMARDLSQSYKKLKEQTESLIQQNEELQEFNAELEASYEQLEALTHELEISERKYRLLVENIR
DILWVTDKNFIIEFVNSRVIRYLNYTPHELIGKSIFEIVDEDSREILKNMMEGKINFSEINFKSKEGLLVITETYVKRLK
IDEEVVGIQGISRDITEIYYVKKQIAEKNNEILAISDVGKLLTSGSDIKEVLNNIVEKVAELLNSPLCTIREYNPYFHKF
VLLVKGGELKDYPVSEEIKLSEEDINELVNLKEIKIKDIEEFPCSEKITPIFAAKDVYSVVIVPLIFRNETKGILTVWTA
TNTVKNMSLLRSIASAVSVAIENSKLYDEIKKVYIKTIEALAYAMEAKDLYTKGHSMRVSQYAVLIGEYMGFSREKIEQL
RIAGILHDIGKIGISDTILLKKGKLLEEEYNVIKSHPEISKKILMPIDLPKEILEAISKHHERYDGKGYPYGLKGEEIPI
EAAILGVADAFDAMTSDRAYRKGMTIEEAINELLKYKGTQFHPEVVDAFISLYMNEKHRLEEIKNQVFSNAS

Sequences:

>Translated_632_residues
MFKRNYNTRIFFVLFGISVIVFSLSLAYFLSGFENRVFIGGIILLISLGLSSFLSKKLSEPIEKLNEAVKRISRGDFDYQ
LNITDSKELRELSENFNSMARDLSQSYKKLKEQTESLIQQNEELQEFNAELEASYEQLEALTHELEISERKYRLLVENIR
DILWVTDKNFIIEFVNSRVIRYLNYTPHELIGKSIFEIVDEDSREILKNMMEGKINFSEINFKSKEGLLVITETYVKRLK
IDEEVVGIQGISRDITEIYYVKKQIAEKNNEILAISDVGKLLTSGSDIKEVLNNIVEKVAELLNSPLCTIREYNPYFHKF
VLLVKGGELKDYPVSEEIKLSEEDINELVNLKEIKIKDIEEFPCSEKITPIFAAKDVYSVVIVPLIFRNETKGILTVWTA
TNTVKNMSLLRSIASAVSVAIENSKLYDEIKKVYIKTIEALAYAMEAKDLYTKGHSMRVSQYAVLIGEYMGFSREKIEQL
RIAGILHDIGKIGISDTILLKKGKLLEEEYNVIKSHPEISKKILMPIDLPKEILEAISKHHERYDGKGYPYGLKGEEIPI
EAAILGVADAFDAMTSDRAYRKGMTIEEAINELLKYKGTQFHPEVVDAFISLYMNEKHRLEEIKNQVFSNAS
>Mature_632_residues
MFKRNYNTRIFFVLFGISVIVFSLSLAYFLSGFENRVFIGGIILLISLGLSSFLSKKLSEPIEKLNEAVKRISRGDFDYQ
LNITDSKELRELSENFNSMARDLSQSYKKLKEQTESLIQQNEELQEFNAELEASYEQLEALTHELEISERKYRLLVENIR
DILWVTDKNFIIEFVNSRVIRYLNYTPHELIGKSIFEIVDEDSREILKNMMEGKINFSEINFKSKEGLLVITETYVKRLK
IDEEVVGIQGISRDITEIYYVKKQIAEKNNEILAISDVGKLLTSGSDIKEVLNNIVEKVAELLNSPLCTIREYNPYFHKF
VLLVKGGELKDYPVSEEIKLSEEDINELVNLKEIKIKDIEEFPCSEKITPIFAAKDVYSVVIVPLIFRNETKGILTVWTA
TNTVKNMSLLRSIASAVSVAIENSKLYDEIKKVYIKTIEALAYAMEAKDLYTKGHSMRVSQYAVLIGEYMGFSREKIEQL
RIAGILHDIGKIGISDTILLKKGKLLEEEYNVIKSHPEISKKILMPIDLPKEILEAISKHHERYDGKGYPYGLKGEEIPI
EAAILGVADAFDAMTSDRAYRKGMTIEEAINELLKYKGTQFHPEVVDAFISLYMNEKHRLEEIKNQVFSNAS

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72536; Mature: 72536

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS50885 HAMP ; PS50112 PAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRNYNTRIFFVLFGISVIVFSLSLAYFLSGFENRVFIGGIILLISLGLSSFLSKKLSE
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PIEKLNEAVKRISRGDFDYQLNITDSKELRELSENFNSMARDLSQSYKKLKEQTESLIQQ
HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NEELQEFNAELEASYEQLEALTHELEISERKYRLLVENIRDILWVTDKNFIIEFVNSRVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHH
RYLNYTPHELIGKSIFEIVDEDSREILKNMMEGKINFSEINFKSKEGLLVITETYVKRLK
HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEHHHHHHHC
IDEEVVGIQGISRDITEIYYVKKQIAEKNNEILAISDVGKLLTSGSDIKEVLNNIVEKVA
CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHH
ELLNSPLCTIREYNPYFHKFVLLVKGGELKDYPVSEEIKLSEEDINELVNLKEIKIKDIE
HHHCCCCEEEECCCHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCHHHCEECCHH
EFPCSEKITPIFAAKDVYSVVIVPLIFRNETKGILTVWTATNTVKNMSLLRSIASAVSVA
HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
IENSKLYDEIKKVYIKTIEALAYAMEAKDLYTKGHSMRVSQYAVLIGEYMGFSREKIEQL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
RIAGILHDIGKIGISDTILLKKGKLLEEEYNVIKSHPEISKKILMPIDLPKEILEAISKH
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHH
HERYDGKGYPYGLKGEEIPIEAAILGVADAFDAMTSDRAYRKGMTIEEAINELLKYKGTQ
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCC
FHPEVVDAFISLYMNEKHRLEEIKNQVFSNAS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFKRNYNTRIFFVLFGISVIVFSLSLAYFLSGFENRVFIGGIILLISLGLSSFLSKKLSE
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PIEKLNEAVKRISRGDFDYQLNITDSKELRELSENFNSMARDLSQSYKKLKEQTESLIQQ
HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NEELQEFNAELEASYEQLEALTHELEISERKYRLLVENIRDILWVTDKNFIIEFVNSRVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHH
RYLNYTPHELIGKSIFEIVDEDSREILKNMMEGKINFSEINFKSKEGLLVITETYVKRLK
HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCEEEEEHHHHHHHC
IDEEVVGIQGISRDITEIYYVKKQIAEKNNEILAISDVGKLLTSGSDIKEVLNNIVEKVA
CCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHH
ELLNSPLCTIREYNPYFHKFVLLVKGGELKDYPVSEEIKLSEEDINELVNLKEIKIKDIE
HHHCCCCEEEECCCHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCHHHCEECCHH
EFPCSEKITPIFAAKDVYSVVIVPLIFRNETKGILTVWTATNTVKNMSLLRSIASAVSVA
HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
IENSKLYDEIKKVYIKTIEALAYAMEAKDLYTKGHSMRVSQYAVLIGEYMGFSREKIEQL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH
RIAGILHDIGKIGISDTILLKKGKLLEEEYNVIKSHPEISKKILMPIDLPKEILEAISKH
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHH
HERYDGKGYPYGLKGEEIPIEAAILGVADAFDAMTSDRAYRKGMTIEEAINELLKYKGTQ
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCC
FHPEVVDAFISLYMNEKHRLEEIKNQVFSNAS
CCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]