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The map label for this gene is nodA

Identifier: 16519765

GI number: 16519765

Start: 434512

End: 435102

Strand: Direct

Name: nodA

Synonym: NGR_a03410

Alternate gene names: 16519765

Gene position: 434512-435102 (Clockwise)

Preceding gene: 16519766

Following gene: 16519764

Centisome position: 81.04

GC content: 59.39

Gene sequence:

>591_bases
ATGCGTCCTCAGATGCGGTGGAAACTGTGCTGGGAAAATGAGCTGGAGCTCTCCGACCACACTGAACTCGCTGAGTTCTT
CCGGAAGACCTATGGACCGACCGGGACGTTCAACGCAAGACCATTTGAAGGTGGGCACAGTTGGGCCGGAGCAAGGCCGG
AGCTCCGTGTAATCGGCTACGACGCTCACGGAGTGGCTGCTCACATGGGGCTGTTGCGCCGCTTTATCAGGGTGGGCGAT
GCCGATCTGTTGGTGGCGGAACTGGGTTTGTGGGGGGTTCGCCCGGACCTCGAAGGACTCGGGCTCAACCACTCCATCCG
CGTCATGTATCCGGTGCTGCAGCAGCTTGGCGTTCCGTTCGCATTTGGCGCCGTTCGCCACGCGCTGTACAAGCTTGTGG
GCAGACTCTGCCGAAACGGTCTCGGGACAATTGTGGCTGGCGTTCGCGTGCGGTCCACCCTTTCAGATGTCTATCTCAAC
CTGCCGCCAACGCGCACTGAAGACGTACTCGTTGTGGTCTTTCCGATTGGACGTCCAATGAGCGAATGGCCATCCGGCAC
ACTGATCGAACGAAACGGTCCGGAACTATGA

Upstream 100 bases:

>100_bases
AATGCGGGTTCGACGACAGTGTCGGGCGTCCATCGACCCCGGCCATTTCGGACGTTTGATGTACGTTTCAAGAAGCAGCA
AGATGTGGAGTTCTTTGGAT

Downstream 100 bases:

>100_bases
AACAGCTTGACTATCTCCGGACAGTGCCCAGAAGCGGCACTGGGGCCCCGAGCGTCTACCTGACCTTTGACGACGGTCCT
AACCCGGTTTTTACCCCTGA

Product: acyltransferase NodA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRPQMRWKLCWENELELSDHTELAEFFRKTYGPTGTFNARPFEGGHSWAGARPELRVIGYDAHGVAAHMGLLRRFIRVGD
ADLLVAELGLWGVRPDLEGLGLNHSIRVMYPVLQQLGVPFAFGAVRHALYKLVGRLCRNGLGTIVAGVRVRSTLSDVYLN
LPPTRTEDVLVVVFPIGRPMSEWPSGTLIERNGPEL

Sequences:

>Translated_196_residues
MRPQMRWKLCWENELELSDHTELAEFFRKTYGPTGTFNARPFEGGHSWAGARPELRVIGYDAHGVAAHMGLLRRFIRVGD
ADLLVAELGLWGVRPDLEGLGLNHSIRVMYPVLQQLGVPFAFGAVRHALYKLVGRLCRNGLGTIVAGVRVRSTLSDVYLN
LPPTRTEDVLVVVFPIGRPMSEWPSGTLIERNGPEL
>Mature_196_residues
MRPQMRWKLCWENELELSDHTELAEFFRKTYGPTGTFNARPFEGGHSWAGARPELRVIGYDAHGVAAHMGLLRRFIRVGD
ADLLVAELGLWGVRPDLEGLGLNHSIRVMYPVLQQLGVPFAFGAVRHALYKLVGRLCRNGLGTIVAGVRVRSTLSDVYLN
LPPTRTEDVLVVVFPIGRPMSEWPSGTLIERNGPEL

Specific function: N-acyltransferase required for nodulation. Acts in the production of a small, heat-stable compound (Nod) that stimulates mitosis in various plant protoplasts

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nodA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NODA_RHISN (P50349)

Other databases:

- EMBL:   X73362
- EMBL:   U00090
- PIR:   S34303
- RefSeq:   NP_443885.1
- GeneID:   962319
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03410
- HOGENOM:   HBG334850
- ProtClustDB:   PRK00756
- GO:   GO:0005737
- GO:   GO:0009877
- HAMAP:   MF_00084
- InterPro:   IPR003484
- InterPro:   IPR020567

Pfam domain/function: PF02474 NodA

EC number: NA

Molecular weight: Translated: 21900; Mature: 21900

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS01349 NODA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPQMRWKLCWENELELSDHTELAEFFRKTYGPTGTFNARPFEGGHSWAGARPELRVIGY
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
DAHGVAAHMGLLRRFIRVGDADLLVAELGLWGVRPDLEGLGLNHSIRVMYPVLQQLGVPF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH
AFGAVRHALYKLVGRLCRNGLGTIVAGVRVRSTLSDVYLNLPPTRTEDVLVVVFPIGRPM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCH
SEWPSGTLIERNGPEL
HHCCCCCEECCCCCCC
>Mature Secondary Structure
MRPQMRWKLCWENELELSDHTELAEFFRKTYGPTGTFNARPFEGGHSWAGARPELRVIGY
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
DAHGVAAHMGLLRRFIRVGDADLLVAELGLWGVRPDLEGLGLNHSIRVMYPVLQQLGVPF
CCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCH
AFGAVRHALYKLVGRLCRNGLGTIVAGVRVRSTLSDVYLNLPPTRTEDVLVVVFPIGRPM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECCCCH
SEWPSGTLIERNGPEL
HHCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7984092; 9163424