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Identifier: 16519766

GI number: 16519766

Start: 433322

End: 434104

Strand: Direct

Name: Not Available

Synonym: NGR_a03400

Alternate gene names: 16519766

Gene position: 433322-434104 (Clockwise)

Preceding gene: 16519774

Following gene: 16519765

Centisome position: 80.82

GC content: 58.37

Gene sequence:

>783_bases
GTGGCTGAGGAACTTGCCGGCGTCAGATCCGGTGTCGTTGTATCTCCACATTCCGATCTGTCGGTCGATGTGCTGGTATT
GCGGATTTCCCAACAGCATAACTCGTCGAGACGCATCGATCCTCGACTATCTGACGGCGCTAGTGAGGAGATAAGTTTGG
TAGCAGCCCAAGCGCCGCAGGCGCTGCCCGTGAGCGACGTGCACTTCGGCGGTGGAACACCAACCATCATCAAGCCAGAA
GATTTTCTGGCTCTGATGGATCTTCTGCGTCGCAGTTTCGCCTTCAGGAAAACGGCTACCATCGCTGTCGAGATCGAGCC
GCGCACCTTCACGGCCGAGATGGCCGAAGCCTTAGGAGCGGCCGAGGTAAGCCACGTGAGCCTCGGCGTGCAAAGCTTTG
ATCCCATTGTTCAAAAAGCAACCAACCGGGTCCAGAGAAAGGCGCAGACGACCGCGGCTATTGAAAACCTGCGCCGGATT
GGGATAAGTCGCATCAACTTCGACCTCATGTACGGCCTCCCGCACCAGACCGTGCAGTCCTGCGTTCAGAGCGCGACGGC
AGCGGTCGCAATGCGCCCCGACCGGCTTGCGGTATTTGGTTACGCCCACGTTCCATCCTACAGGAAAAATCAGCGCCTGA
TCGACGAGACGGCACTGCCTGATATAGCTGCCCGAGCCGAACAAGCCGTGGCTGTGGCCGAAACGTATCTGCCGAACGGC
GCGGGAGCAGTAGCGGTATTAGCTTCATTGCCGTTGGCGGCCAAGTCTCAGCCTGTTCTTTGA

Upstream 100 bases:

>100_bases
ACCTCCACTCTTGCAAAAGTACTGCGAGGCGCACCTACCATGGTACACGATCGACTATACCGGATTTCTCCGCAGCCGTC
GGCGCTGAAGCTAGTAAGGG

Downstream 100 bases:

>100_bases
TCCAACTTCCTTGTTTTCGAGAGCGTGGCCGCACGCCCATGATTGGCGGGCCGAAGCTGATGCTCCCGCCGCGGTGTCGG
GTTCGTTCATCAACCGTTGC

Product: hypothetical protein

Products: Protoporphyrinogen IX; CO2; H2O

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MAEELAGVRSGVVVSPHSDLSVDVLVLRISQQHNSSRRIDPRLSDGASEEISLVAAQAPQALPVSDVHFGGGTPTIIKPE
DFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRI
GISRINFDLMYGLPHQTVQSCVQSATAAVAMRPDRLAVFGYAHVPSYRKNQRLIDETALPDIAARAEQAVAVAETYLPNG
AGAVAVLASLPLAAKSQPVL

Sequences:

>Translated_260_residues
MAEELAGVRSGVVVSPHSDLSVDVLVLRISQQHNSSRRIDPRLSDGASEEISLVAAQAPQALPVSDVHFGGGTPTIIKPE
DFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRI
GISRINFDLMYGLPHQTVQSCVQSATAAVAMRPDRLAVFGYAHVPSYRKNQRLIDETALPDIAARAEQAVAVAETYLPNG
AGAVAVLASLPLAAKSQPVL
>Mature_259_residues
AEELAGVRSGVVVSPHSDLSVDVLVLRISQQHNSSRRIDPRLSDGASEEISLVAAQAPQALPVSDVHFGGGTPTIIKPED
FLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIG
ISRINFDLMYGLPHQTVQSCVQSATAAVAMRPDRLAVFGYAHVPSYRKNQRLIDETALPDIAARAEQAVAVAETYLPNGA
GAVAVLASLPLAAKSQPVL

Specific function: Anaerobic Transformation Of Coproporphyrinogen-III Into Protoporphyrinogen-IX. [C]

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082341, Length=157, Percent_Identity=39.4904458598726, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1789325, Length=177, Percent_Identity=27.683615819209, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4HJ_RHISN (P55477)

Other databases:

- EMBL:   U00090
- PIR:   T10844
- RefSeq:   NP_443886.1
- ProteinModelPortal:   P55477
- SMR:   P55477
- GeneID:   962573
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03400
- InterPro:   IPR006638
- InterPro:   IPR007197
- SMART:   SM00729

Pfam domain/function: PF04055 Radical_SAM

EC number: 1.3.3.3

Molecular weight: Translated: 27825; Mature: 27694

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEELAGVRSGVVVSPHSDLSVDVLVLRISQQHNSSRRIDPRLSDGASEEISLVAAQAPQ
CCHHHHHHHCCEEECCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCHHEEEEEECCCC
ALPVSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGA
CCCCCCEECCCCCCCEECCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCH
AEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLPHQTVQS
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCEEEEECCCHHHHHH
CVQSATAAVAMRPDRLAVFGYAHVPSYRKNQRLIDETALPDIAARAEQAVAVAETYLPNG
HHHHHHHHEEECCCCEEEEEEHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
AGAVAVLASLPLAAKSQPVL
CCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AEELAGVRSGVVVSPHSDLSVDVLVLRISQQHNSSRRIDPRLSDGASEEISLVAAQAPQ
CHHHHHHHCCEEECCCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCHHEEEEEECCCC
ALPVSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGA
CCCCCCEECCCCCCCEECCHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHCH
AEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLPHQTVQS
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCEEEEECCCHHHHHH
CVQSATAAVAMRPDRLAVFGYAHVPSYRKNQRLIDETALPDIAARAEQAVAVAETYLPNG
HHHHHHHHEEECCCCEEEEEEHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCC
AGAVAVLASLPLAAKSQPVL
CCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Coproporphyrinogen III; O2; H+

Specific reaction: coproporphyrinogen-III + O2 + 2 H+ = protoporphyrinogen-IX + 2 CO2 + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424