Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519732

GI number: 16519732

Start: 480370

End: 480759

Strand: Direct

Name: Not Available

Synonym: NGR_a03740

Alternate gene names: NA

Gene position: 480370-480759 (Clockwise)

Preceding gene: 16519733

Following gene: 16519731

Centisome position: 89.59

GC content: 54.87

Gene sequence:

>390_bases
ATGCATCCGGGATCAAAAACAATGCGATATCCTCATCCGTGCCGCGCGACCATGTTCGAGGCGGTCTTCCGCCGCAGGCT
CGATGCATTGGGCATGACGATATCGGGCTCTCTGGCAACATCGGAGCTTCGGAACACATTCCGCCAGGAAACGATCATGC
GCCACTGGGCCGTTTCGAAAGAGTTCAGCGGTATGTCGCCGGAAGAGCGCGACGAACGCCTGCTGACCATTGCACACCTA
GAGCCTATTGCAGCTCATGTCCTAGCGTCAGATGATTGCATTTTCGACGTTTCAAGGATTGGTGCCGATCTGATGGAACT
GGACTTGCGGGAAAACGGAGGCTCAGGACATCAAGCTTCCAGCGAAACAGGCTTTCATCATGTTCGGTGA

Upstream 100 bases:

>100_bases
GGGGACATCATTTCAAATGCCTGGGCTTCATTCCTGTTATAAACTGCCCACACCGAACCGAGCTTCTTGCTTGCAGAGAT
TTTGATCAGGCTGGGTGTGA

Downstream 100 bases:

>100_bases
ACAGCCAGGCCTGCAGGTCGATAACCAATCGGGCTTGTTCATCGAAGGCGCATATGTTTCCAGGTCCGATGAGGGCGACG
GCGGCATCGATATCATACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSKEFSGMSPEERDERLLTIAHL
EPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQASSETGFHHVR

Sequences:

>Translated_129_residues
MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSKEFSGMSPEERDERLLTIAHL
EPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQASSETGFHHVR
>Mature_129_residues
MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSKEFSGMSPEERDERLLTIAHL
EPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQASSETGFHHVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4FG_RHISN (P55445)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443852.1
- GeneID:   962594
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03740

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14524; Mature: 14524

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EFSGMSPEERDERLLTIAHLEPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQAS
HCCCCCCCCHHHHEEHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCC
SETGFHHVR
CCCCCCCCC
>Mature Secondary Structure
MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
EFSGMSPEERDERLLTIAHLEPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQAS
HCCCCCCCCHHHHEEHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCC
SETGFHHVR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424