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The map label for this gene is oppA [H]

Identifier: 163844696

GI number: 163844696

Start: 518712

End: 520289

Strand: Reverse

Name: oppA [H]

Synonym: BSUIS_B0533

Alternate gene names: 163844696

Gene position: 520289-518712 (Counterclockwise)

Preceding gene: 163844697

Following gene: 163844695

Centisome position: 37.14

GC content: 53.36

Gene sequence:

>1578_bases
ATGGTTCGCGGAATTTTGATGACAGGCATTTGCCTTCTGGCGTTGAACAGTGCCGCATCGGCACAAACAGTGCTCAACCG
GGGTAACGATACCGATCCCGCGACACTGGATCAGCACCATACTTCGACCGTTTCCGAAAACCGCGTTCTCCGCGACCTTT
ATGAAGGTCTTCTGGCGCAAAATGCCAAGGGCGAAGCCATTCCGGGCGCTGCCTCCTCTTGGGATATTTCGGAAGACGGC
AAGGTCTATACCTTTCATATGCGCGACGGCGCAAAATGGTCAAACGGTGATCCGGTGACGGCTGGCGACTTCGAGTTCTC
GTTCCGCCGCATCATGGACCCGAAGACGGCAGCCGGTTATGCAAGCGTTCTTTATGCCATCCAGAATGGCGAAGAAGTTG
CAACCGGAAAAATGCCGGTGGACCAGCTTGGCGTGAAGGCGCTGGACGACAAGACACTCCAGATCACGTTGAAAAGCCCT
GCCCCTTATTTTCTTGAGCTTCTGACGCACCAGACCGGCTTTCCGGTCAACAAGAAAGCTGTCGAGAAGTTTGGTGACAA
GTTCACCCTTCCCGGCAATCTCGTGACCAATGGCCCTTACCAGCTTGTCAGCTTCGTACCGAATGACAAGATCGTCATGA
AAAAGAACCCGAACTACTGGGATGCCGAGAACGTCAAGATCGACACGGTCAACTGGATGCCCTTTGAAGACCGGTCGAGC
TGTATGCGCCGCTTTGAGGCAAAGGAAGTGGATATCTGCTCCGATGTTTCTGCCGAGCAGATGGACTATGTGAAGAAGAA
CCTTTCCAAGGAATTCCGCCTCGCGCCCTATCTTGGCATTTATTACGTGGACATTAAGGGCGAGCCTTCCAGCAAACTGC
GCGATCCGCGTGTGCGCCGCGCCATTTCTCTGGCCGCGGACCGGGAATTCATGGCGGATGAGGTCTGGCGTGGCGTCATG
CTGCCCGCCTATTCCATGGTGCCGCCCGGCATCGCCAATTACGTGAAGGATGCACCGAAGCTCGACTTTGCCAATGAAGA
CATTCTCGACCGCGAAGACAAGGCGAAGGAGCTTTTGAAGGAAGCAGGCGTGGAGCCCAATACGCTGTCGGTGACGCTGC
GCTACAACACATCGGAAAATCACAAGAATACGATGGCAGCCTTTGCCAACATGCTGAAAAACATCGGCATCAATGCCAAG
CTGGATGAGGTCGAAGGCACGACCTATTTCAACTATCTTCAGGAAAAAGGCATGTTCGACCTGACCCGTGACGGCTGGAT
CGGAGATTATAACGATCCGAATTCGTTCCTGGAACTTTATACAACCGGCAATTATTTCAATTATGCCGAATGGTCGAACA
AGGATTACGATGCGCTGATGGATAAATCTGCTGTCACGACCGATCTCGCCGAACGTGCGAAGATCCTGGCTGAGGCAGAA
GAGATTCTCCTGAAGGAAGGGGCTATCGTGCCATTGATGTATTATTCGTCGACCGCATTGGTTGCCGACAGGGTTCAAGG
TTGCGACGATAACCTCATGAACTCGCACGGCACGCGCTGGCTATCCGTCAAGAACTAA

Upstream 100 bases:

>100_bases
CTTGGGCTGCGCTTATCAGCGCGGCCCTTGTCCTTCCGGGGGGCCCGAAGGGGCCGCGTTTTGACAAGCATTTTCCAAGA
AAAGCATATGGGAGTTTTCG

Downstream 100 bases:

>100_bases
CAAAACGAAACCCCTTAGGGGTTTGCCGGGCCGTTTGGAACGCTGCATGAGAGCATTTTCGAGCCAAAAGTGTGAAACGC
CTACGCGGGGAAATCAGTCC

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 525

Protein sequence:

>525_residues
MVRGILMTGICLLALNSAASAQTVLNRGNDTDPATLDQHHTSTVSENRVLRDLYEGLLAQNAKGEAIPGAASSWDISEDG
KVYTFHMRDGAKWSNGDPVTAGDFEFSFRRIMDPKTAAGYASVLYAIQNGEEVATGKMPVDQLGVKALDDKTLQITLKSP
APYFLELLTHQTGFPVNKKAVEKFGDKFTLPGNLVTNGPYQLVSFVPNDKIVMKKNPNYWDAENVKIDTVNWMPFEDRSS
CMRRFEAKEVDICSDVSAEQMDYVKKNLSKEFRLAPYLGIYYVDIKGEPSSKLRDPRVRRAISLAADREFMADEVWRGVM
LPAYSMVPPGIANYVKDAPKLDFANEDILDREDKAKELLKEAGVEPNTLSVTLRYNTSENHKNTMAAFANMLKNIGINAK
LDEVEGTTYFNYLQEKGMFDLTRDGWIGDYNDPNSFLELYTTGNYFNYAEWSNKDYDALMDKSAVTTDLAERAKILAEAE
EILLKEGAIVPLMYYSSTALVADRVQGCDDNLMNSHGTRWLSVKN

Sequences:

>Translated_525_residues
MVRGILMTGICLLALNSAASAQTVLNRGNDTDPATLDQHHTSTVSENRVLRDLYEGLLAQNAKGEAIPGAASSWDISEDG
KVYTFHMRDGAKWSNGDPVTAGDFEFSFRRIMDPKTAAGYASVLYAIQNGEEVATGKMPVDQLGVKALDDKTLQITLKSP
APYFLELLTHQTGFPVNKKAVEKFGDKFTLPGNLVTNGPYQLVSFVPNDKIVMKKNPNYWDAENVKIDTVNWMPFEDRSS
CMRRFEAKEVDICSDVSAEQMDYVKKNLSKEFRLAPYLGIYYVDIKGEPSSKLRDPRVRRAISLAADREFMADEVWRGVM
LPAYSMVPPGIANYVKDAPKLDFANEDILDREDKAKELLKEAGVEPNTLSVTLRYNTSENHKNTMAAFANMLKNIGINAK
LDEVEGTTYFNYLQEKGMFDLTRDGWIGDYNDPNSFLELYTTGNYFNYAEWSNKDYDALMDKSAVTTDLAERAKILAEAE
EILLKEGAIVPLMYYSSTALVADRVQGCDDNLMNSHGTRWLSVKN
>Mature_525_residues
MVRGILMTGICLLALNSAASAQTVLNRGNDTDPATLDQHHTSTVSENRVLRDLYEGLLAQNAKGEAIPGAASSWDISEDG
KVYTFHMRDGAKWSNGDPVTAGDFEFSFRRIMDPKTAAGYASVLYAIQNGEEVATGKMPVDQLGVKALDDKTLQITLKSP
APYFLELLTHQTGFPVNKKAVEKFGDKFTLPGNLVTNGPYQLVSFVPNDKIVMKKNPNYWDAENVKIDTVNWMPFEDRSS
CMRRFEAKEVDICSDVSAEQMDYVKKNLSKEFRLAPYLGIYYVDIKGEPSSKLRDPRVRRAISLAADREFMADEVWRGVM
LPAYSMVPPGIANYVKDAPKLDFANEDILDREDKAKELLKEAGVEPNTLSVTLRYNTSENHKNTMAAFANMLKNIGINAK
LDEVEGTTYFNYLQEKGMFDLTRDGWIGDYNDPNSFLELYTTGNYFNYAEWSNKDYDALMDKSAVTTDLAERAKILAEAE
EILLKEGAIVPLMYYSSTALVADRVQGCDDNLMNSHGTRWLSVKN

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=516, Percent_Identity=38.5658914728682, Blast_Score=347, Evalue=1e-96,
Organism=Escherichia coli, GI87081878, Length=491, Percent_Identity=35.6415478615071, Blast_Score=303, Evalue=1e-83,
Organism=Escherichia coli, GI1789397, Length=496, Percent_Identity=34.2741935483871, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1787052, Length=512, Percent_Identity=25.1953125, Blast_Score=149, Evalue=5e-37,
Organism=Escherichia coli, GI1789966, Length=546, Percent_Identity=25.6410256410256, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1787762, Length=511, Percent_Identity=25.6360078277886, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1787551, Length=448, Percent_Identity=23.8839285714286, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1789887, Length=473, Percent_Identity=24.9471458773784, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58768; Mature: 58768

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGILMTGICLLALNSAASAQTVLNRGNDTDPATLDQHHTSTVSENRVLRDLYEGLLAQ
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
NAKGEAIPGAASSWDISEDGKVYTFHMRDGAKWSNGDPVTAGDFEFSFRRIMDPKTAAGY
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHH
ASVLYAIQNGEEVATGKMPVDQLGVKALDDKTLQITLKSPAPYFLELLTHQTGFPVNKKA
HHHHHHHCCCCEEECCCCCHHHHCCEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCHHH
VEKFGDKFTLPGNLVTNGPYQLVSFVPNDKIVMKKNPNYWDAENVKIDTVNWMPFEDRSS
HHHCCCEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHH
CMRRFEAKEVDICSDVSAEQMDYVKKNLSKEFRLAPYLGIYYVDIKGEPSSKLRDPRVRR
HHHHHCCCCCCHHCCCCHHHHHHHHHHCCCHHCCCCEEEEEEEEECCCCCHHCCCHHHHH
AISLAADREFMADEVWRGVMLPAYSMVPPGIANYVKDAPKLDFANEDILDREDKAKELLK
HHHHHHHHHHHHHHHHCCHHCCCHHCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
EAGVEPNTLSVTLRYNTSENHKNTMAAFANMLKNIGINAKLDEVEGTTYFNYLQEKGMFD
HCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHCCCEE
LTRDGWIGDYNDPNSFLELYTTGNYFNYAEWSNKDYDALMDKSAVTTDLAERAKILAEAE
ECCCCCCCCCCCCHHEEEEEECCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
EILLKEGAIVPLMYYSSTALVADRVQGCDDNLMNSHGTRWLSVKN
HHHHHCCCEEEEEEECCHHHHHHHHCCCCHHHHCCCCCEEEEECC
>Mature Secondary Structure
MVRGILMTGICLLALNSAASAQTVLNRGNDTDPATLDQHHTSTVSENRVLRDLYEGLLAQ
CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
NAKGEAIPGAASSWDISEDGKVYTFHMRDGAKWSNGDPVTAGDFEFSFRRIMDPKTAAGY
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHH
ASVLYAIQNGEEVATGKMPVDQLGVKALDDKTLQITLKSPAPYFLELLTHQTGFPVNKKA
HHHHHHHCCCCEEECCCCCHHHHCCEEECCCEEEEEECCCCHHHHHHHHHCCCCCCCHHH
VEKFGDKFTLPGNLVTNGPYQLVSFVPNDKIVMKKNPNYWDAENVKIDTVNWMPFEDRSS
HHHCCCEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHH
CMRRFEAKEVDICSDVSAEQMDYVKKNLSKEFRLAPYLGIYYVDIKGEPSSKLRDPRVRR
HHHHHCCCCCCHHCCCCHHHHHHHHHHCCCHHCCCCEEEEEEEEECCCCCHHCCCHHHHH
AISLAADREFMADEVWRGVMLPAYSMVPPGIANYVKDAPKLDFANEDILDREDKAKELLK
HHHHHHHHHHHHHHHHCCHHCCCHHCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
EAGVEPNTLSVTLRYNTSENHKNTMAAFANMLKNIGINAKLDEVEGTTYFNYLQEKGMFD
HCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHCCCEE
LTRDGWIGDYNDPNSFLELYTTGNYFNYAEWSNKDYDALMDKSAVTTDLAERAKILAEAE
ECCCCCCCCCCCCHHEEEEEECCCEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
EILLKEGAIVPLMYYSSTALVADRVQGCDDNLMNSHGTRWLSVKN
HHHHHCCCEEEEEEECCHHHHHHHHCCCCHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821267; 3525163; 11677609; 8202710; 8747465; 10422831; 10438628 [H]