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The map label for this gene is oppB [H]

Identifier: 163844695

GI number: 163844695

Start: 517574

End: 518497

Strand: Reverse

Name: oppB [H]

Synonym: BSUIS_B0532

Alternate gene names: 163844695

Gene position: 518497-517574 (Counterclockwise)

Preceding gene: 163844696

Following gene: 163844694

Centisome position: 37.01

GC content: 58.23

Gene sequence:

>924_bases
ATGTTGGGCTACACGCTCCGAAGATTGGGTAGTGCAATACCCACAATCTTCATCATCATCACGCTGACATTTTTCCTGAT
CCGGCTTGCGCCGGGCGGCCCGTTCGATCTGGAACGCCCAATCGACCCGCTGATCCTGGAGAACCTCAAGAAAGCCTATA
ATATGGATGCGCCGCTATGGCAGCAGTATCTCATATATCTGGGCAATCTGTTGCATGGCGATCTTGGCCCAAGCTTCACC
CGGCGTGACTTCACGGTGAACGATCTTTTCGCTTCCGGCCTTCCGGTCTCGATCATACTCGGCACGCTTGGCCTGACCCT
TGCCGCCATCATCGGCACTTTCCTCGGCACGCTGGCTGCGCTGAAACAGAATTCGGCAACTGATTATTTTGTCGTCGCAC
TTGCCACTTTCGGCATCACCACGCCCAATTTCGTCGTGGCCCCTTTGCTTAGCCTCCTTTTTGGCGTCATTCTCGGCTGG
GTTCCGGCTGGCGGCTGGTCTTCTGCCAATGTAGCCTATTGGATATTGCCGGTCCTGACACTGGCATTGCCGCAAGTGGG
CGTGATCGCGCGCCTCGTGCGCGGCGCAACCATCGAGGCACTTCGCGCCAATCACGTGCGCACCGCCCGCGCCTATGGCC
TGCCCTCGCGCGTGGTGGTCGGCATTCATGCACTGCGCGCCGCCATGCTTCCCGCCGTTTCCTATCTGGGCCCAACCGCC
GCCGCCCTTCTCACCGGCTCGGTCGTGGTGGAAACCATTTTCGGCATTCCCGGCATTGGCCGCTACTTCGTGCAGGGCGC
CCTCAGCCGCGATTACACCCTCGTCATGGGCACGGTTGTCGTCATCTCGATTTTCGTGGTTGTTTTCAATCTGATCGTCG
ATCTTCTTTATGCATGGCTTGATCCGAGGGTTCGCTATGACTGA

Upstream 100 bases:

>100_bases
CAACCTCGCTTCAATGCGTTGAAAAATGCGGCAAAACAAATAGTTAAAGCGGTTTAGCGATAGGAATCGCTTGGCGCTCC
GGCAAGGAAGGGAAAAGAAC

Downstream 100 bases:

>100_bases
TCTCACTGTACCAACGGAAACCGCCGAACTCAGCATGCCAAGCCGTTCGCTCTGGCAGGATGCCTTCCTGCGCCTGCGCA
AGAACAAGGCAGCCGTTACC

Product: hypothetical protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLWQQYLIYLGNLLHGDLGPSFT
RRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAALKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGW
VPAGGWSSANVAYWILPVLTLALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVVVFNLIVDLLYAWLDPRVRYD

Sequences:

>Translated_307_residues
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLWQQYLIYLGNLLHGDLGPSFT
RRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAALKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGW
VPAGGWSSANVAYWILPVLTLALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVVVFNLIVDLLYAWLDPRVRYD
>Mature_307_residues
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLWQQYLIYLGNLLHGDLGPSFT
RRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAALKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGW
VPAGGWSSANVAYWILPVLTLALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVVVFNLIVDLLYAWLDPRVRYD

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=306, Percent_Identity=49.6732026143791, Blast_Score=322, Evalue=2e-89,
Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=35.1032448377581, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1787053, Length=309, Percent_Identity=35.9223300970874, Blast_Score=184, Evalue=8e-48,
Organism=Escherichia coli, GI1789888, Length=313, Percent_Identity=34.8242811501597, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1787761, Length=316, Percent_Identity=35.4430379746835, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1788504, Length=363, Percent_Identity=26.4462809917355, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1787550, Length=275, Percent_Identity=27.2727272727273, Blast_Score=110, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33112; Mature: 33112

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
QQYLIYLGNLLHGDLGPSFTRRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGWVPAGGWSSANVAYWILPVLT
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
HHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHH
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVVVFNLIVDLLYAWL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPRVRYD
CCCCCCC
>Mature Secondary Structure
MLGYTLRRLGSAIPTIFIIITLTFFLIRLAPGGPFDLERPIDPLILENLKKAYNMDAPLW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH
QQYLIYLGNLLHGDLGPSFTRRDFTVNDLFASGLPVSIILGTLGLTLAAIIGTFLGTLAA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQNSATDYFVVALATFGITTPNFVVAPLLSLLFGVILGWVPAGGWSSANVAYWILPVLT
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LALPQVGVIARLVRGATIEALRANHVRTARAYGLPSRVVVGIHALRAAMLPAVSYLGPTA
HHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHH
AALLTGSVVVETIFGIPGIGRYFVQGALSRDYTLVMGTVVVISIFVVVFNLIVDLLYAWL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPRVRYD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]