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The map label for this gene is ybgK [C]

Identifier: 16273615

GI number: 16273615

Start: 1803086

End: 1804015

Strand: Reverse

Name: ybgK [C]

Synonym: HI1730

Alternate gene names: 16273615

Gene position: 1804015-1803086 (Counterclockwise)

Preceding gene: 16273616

Following gene: 16273656

Centisome position: 98.57

GC content: 41.08

Gene sequence:

>930_bases
ATGATTGATATTCTTGATGTGAAATCCCGTGCGACCATTCAAGATTTAGGGCGTTTTGGTTTACGCCGATTTGGCATTAG
CCATTGTGGGGCAATGGATAAATTAGCATTACGCGCAGGCAATATTTTATTGGGCAATGCAGAGAATGTTCCTGCCATTG
AAGTGCCTTTAGGCGGTATTACATTGCAATTTCAGCAAGATATGAATTTTTGTGTGACTGGTGCTTTTTATGAAATGATG
TTAGATGATAAGCCCGTTTTTGCTTATTGGCGTTATCAAGTGCGAGCAGGTCAAATATTAAAAATGGCACGTGCAAAAAT
TGGAATGTATGGTTATTTATGTGTTCAAGGCGGTTTTGTTTTGCCTCAAGCATTGAATTCTTGCAGCACGGATTTGAGAG
CGCAAATAGGGGGCATTGAGGGGCGTTGTTTGCAGGCGGGCGATCAACTACAAACGGCAAATGATCATATTTTGCGTAGC
GAAATTGGTATTGCGCCGATTCCGCTTCGAGATGTTATTCGTGCTTTGCCATCTTCTGAATATCAGGCGTTTAAACGAAA
ATCCCAATATTATTGGTGGCGAAATGAATGGACGTTGCAAAGTAACAGTGATCGTATGGGTTATCGTTTTCAAGGTCAGA
CATTAGAATTAAAGCAGCCGTTGGAAATGCTATCTCACGCCATTCAGTTTGGTAGCGTGCAAGTTCCACCAAGTGGTCAG
CCTATTATTTTGATGGCTGATGCGCAAACCACAGGCGGTTATCCTAAAATCGCTAATGTGATTGATGCTGATCTTGGGGC
TTTGGCACAGGTACGTTTAGGTTCAACGATTAAATTTGAAGCGGTTAGCTTACAAGAGGCTGCTAAATTACGCCGTAAAA
ATGAAATATACCTTGATCAAATTAGGAGAATTGTTGATGAAAAAAATTGA

Upstream 100 bases:

>100_bases
TCGGTTATACTAAACAAGCACTTTTTGATAAAAATCAAGCACAACCAACTTTATTACAAGCTGGCGATACTGTGAAATTT
ATTGTGGAGGGAATTGAACT

Downstream 100 bases:

>100_bases
TTTAAATGCAGATATTGCAGAGGGTTTTCCTTTTGATGAAAGTTTATTGCAGTTGCTTTCTTCTGCAAATGTTGCCTGTG
GCTTACACGCTGGGGGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MIDILDVKSRATIQDLGRFGLRRFGISHCGAMDKLALRAGNILLGNAENVPAIEVPLGGITLQFQQDMNFCVTGAFYEMM
LDDKPVFAYWRYQVRAGQILKMARAKIGMYGYLCVQGGFVLPQALNSCSTDLRAQIGGIEGRCLQAGDQLQTANDHILRS
EIGIAPIPLRDVIRALPSSEYQAFKRKSQYYWWRNEWTLQSNSDRMGYRFQGQTLELKQPLEMLSHAIQFGSVQVPPSGQ
PIILMADAQTTGGYPKIANVIDADLGALAQVRLGSTIKFEAVSLQEAAKLRRKNEIYLDQIRRIVDEKN

Sequences:

>Translated_309_residues
MIDILDVKSRATIQDLGRFGLRRFGISHCGAMDKLALRAGNILLGNAENVPAIEVPLGGITLQFQQDMNFCVTGAFYEMM
LDDKPVFAYWRYQVRAGQILKMARAKIGMYGYLCVQGGFVLPQALNSCSTDLRAQIGGIEGRCLQAGDQLQTANDHILRS
EIGIAPIPLRDVIRALPSSEYQAFKRKSQYYWWRNEWTLQSNSDRMGYRFQGQTLELKQPLEMLSHAIQFGSVQVPPSGQ
PIILMADAQTTGGYPKIANVIDADLGALAQVRLGSTIKFEAVSLQEAAKLRRKNEIYLDQIRRIVDEKN
>Mature_309_residues
MIDILDVKSRATIQDLGRFGLRRFGISHCGAMDKLALRAGNILLGNAENVPAIEVPLGGITLQFQQDMNFCVTGAFYEMM
LDDKPVFAYWRYQVRAGQILKMARAKIGMYGYLCVQGGFVLPQALNSCSTDLRAQIGGIEGRCLQAGDQLQTANDHILRS
EIGIAPIPLRDVIRALPSSEYQAFKRKSQYYWWRNEWTLQSNSDRMGYRFQGQTLELKQPLEMLSHAIQFGSVQVPPSGQ
PIILMADAQTTGGYPKIANVIDADLGALAQVRLGSTIKFEAVSLQEAAKLRRKNEIYLDQIRRIVDEKN

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2)

Homologues:

Organism=Escherichia coli, GI1786930, Length=310, Percent_Identity=47.0967741935484, Blast_Score=278, Evalue=4e-76,
Organism=Saccharomyces cerevisiae, GI6319685, Length=323, Percent_Identity=26.0061919504644, Blast_Score=112, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1730_HAEIN (P44298)

Other databases:

- EMBL:   L42023
- PIR:   B64041
- RefSeq:   NP_439871.1
- GeneID:   950540
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1730
- NMPDR:   fig|71421.1.peg.1642
- TIGR:   HI_1730
- HOGENOM:   HBG534145
- OMA:   YSWWSLP
- ProtClustDB:   CLSK879377
- BioCyc:   HINF71421:HI_1730-MONOMER
- InterPro:   IPR003778
- InterPro:   IPR002130
- Gene3D:   G3DSA:2.40.100.10
- SMART:   SM00797
- TIGRFAMs:   TIGR00724

Pfam domain/function: PF02626 AHS2

EC number: NA

Molecular weight: Translated: 34562; Mature: 34562

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDILDVKSRATIQDLGRFGLRRFGISHCGAMDKLALRAGNILLGNAENVPAIEVPLGGI
CCEEEECCCCCHHHHHHHHHHHHHCHHHCCHHHHHHHHCCCEEEECCCCCCEEEECCCCE
TLQFQQDMNFCVTGAFYEMMLDDKPVFAYWRYQVRAGQILKMARAKIGMYGYLCVQGGFV
EEEEECCCCEEEHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHCCEEEEEECCCEE
LPQALNSCSTDLRAQIGGIEGRCLQAGDQLQTANDHILRSEIGIAPIPLRDVIRALPSSE
HHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCHH
YQAFKRKSQYYWWRNEWTLQSNSDRMGYRFQGQTLELKQPLEMLSHAIQFGSVQVPPSGQ
HHHHHHCCCEEEECCEEEEECCCCCCCEEECCCEECHHHHHHHHHHHHHHCCEECCCCCC
PIILMADAQTTGGYPKIANVIDADLGALAQVRLGSTIKFEAVSLQEAAKLRRKNEIYLDQ
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCHHHHH
IRRIVDEKN
HHHHHCCCC
>Mature Secondary Structure
MIDILDVKSRATIQDLGRFGLRRFGISHCGAMDKLALRAGNILLGNAENVPAIEVPLGGI
CCEEEECCCCCHHHHHHHHHHHHHCHHHCCHHHHHHHHCCCEEEECCCCCCEEEECCCCE
TLQFQQDMNFCVTGAFYEMMLDDKPVFAYWRYQVRAGQILKMARAKIGMYGYLCVQGGFV
EEEEECCCCEEEHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHCCEEEEEECCCEE
LPQALNSCSTDLRAQIGGIEGRCLQAGDQLQTANDHILRSEIGIAPIPLRDVIRALPSSE
HHHHHHHHCHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHCCCHH
YQAFKRKSQYYWWRNEWTLQSNSDRMGYRFQGQTLELKQPLEMLSHAIQFGSVQVPPSGQ
HHHHHHCCCEEEECCEEEEECCCCCCCEEECCCEECHHHHHHHHHHHHHHCCEECCCCCC
PIILMADAQTTGGYPKIANVIDADLGALAQVRLGSTIKFEAVSLQEAAKLRRKNEIYLDQ
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCHHHHH
IRRIVDEKN
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800