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The map label for this gene is ybgJ [C]

Identifier: 16273616

GI number: 16273616

Start: 1804012

End: 1804653

Strand: Reverse

Name: ybgJ [C]

Synonym: HI1731

Alternate gene names: 16273616

Gene position: 1804653-1804012 (Counterclockwise)

Preceding gene: 16273668

Following gene: 16273615

Centisome position: 98.61

GC content: 43.15

Gene sequence:

>642_bases
ATGAATATCGTTCCGATCAGTGAATCGGCGGTGGTTTGCTCTTTGCCACCCCCAGCTTCCATTCAACAACAACGCCAATT
ATGGGCGTTTGCTCGTCAATTGCAATCAGAACAAGATATTGTAGAAGTTGTCTTGGGAATGAATAATCTTACGGTTTTTA
CCGATTTTTTCGTGGATTTTAAGCCGCTTGTGCAACGTTTAGAACAACTTTGGGCTGAGTTGAAAGTATCGGATTTTCAA
GGGCGTCATATTGAAATTCCTGTTATTTATGGGGGAGAGCGAGGTCAGGATTTATCTGATGTAGCGAAATTTCATCAGAC
AACACCAGAGCGGATTATTCAGATGCACAGTGAGCCTATTTATACTGTGTATATGATTGGCTTCCAAGCGGGCTTTCCTT
ATTTGGGTGGTTTACCTGAAAATTTACACACGCCGCGTCGTGCCACGCCAAGAACGGTTGTTCCTGCTGGTTCTGTTGGT
ATTGGGGGGGCGCAAACGGGGATTTATCCTTTTTCTTCGCCAGGTGGGTGGCAGTTGATCGGTTATACTAAACAAGCACT
TTTTGATAAAAATCAAGCACAACCAACTTTATTACAAGCTGGCGATACTGTGAAATTTATTGTGGAGGGAATTGAACTAT
GA

Upstream 100 bases:

>100_bases
AAGATGAAAATAAAGACTTGACAAAATCTATAAATATCCTTTAAAAGAGAGCTGTAACAAAAAAATAACAAATCACATAA
CATCATATAAAGGGTATCTT

Downstream 100 bases:

>100_bases
TTGATATTCTTGATGTGAAATCCCGTGCGACCATTCAAGATTTAGGGCGTTTTGGTTTACGCCGATTTGGCATTAGCCAT
TGTGGGGCAATGGATAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL

Sequences:

>Translated_213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL
>Mature_213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2)

Homologues:

Organism=Escherichia coli, GI1786929, Length=206, Percent_Identity=47.5728155339806, Blast_Score=204, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1731_HAEIN (P44299)

Other databases:

- EMBL:   L42023
- PIR:   C64041
- RefSeq:   NP_439872.1
- ProteinModelPortal:   P44299
- SMR:   P44299
- GeneID:   950880
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1731
- NMPDR:   fig|71421.1.peg.1643
- TIGR:   HI_1731
- HOGENOM:   HBG482819
- OMA:   QPGFAYM
- ProtClustDB:   CLSK877449
- BioCyc:   HINF71421:HI_1731-MONOMER
- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130
- Gene3D:   G3DSA:3.30.1360.40
- Gene3D:   G3DSA:2.40.100.10
- SMART:   SM00796
- TIGRFAMs:   TIGR00370

Pfam domain/function: PF02682 AHS1

EC number: NA

Molecular weight: Translated: 23641; Mature: 23641

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDF
CCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHH
KPLVQRLEQLWAELKVSDFQGRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPI
HHHHHHHHHHHHHHECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCE
YTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVGIGGAQTGIYPFSSPGGWQLI
EEEEEEEECCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEE
GYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL
EEHHHHHHCCCCCCCCEEECCCHHEEHHHHCCC
>Mature Secondary Structure
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDF
CCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHH
KPLVQRLEQLWAELKVSDFQGRHIEIPVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPI
HHHHHHHHHHHHHHECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCE
YTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVGIGGAQTGIYPFSSPGGWQLI
EEEEEEEECCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEE
GYTKQALFDKNQAQPTLLQAGDTVKFIVEGIEL
EEHHHHHHCCCCCCCCEEECCCHHEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800