Click here to switch to the map view.

The map label for this gene is 16273584

Identifier: 16273584

GI number: 16273584

Start: 1766762

End: 1767535

Strand: Reverse

Name: 16273584

Synonym: HI1697

Alternate gene names: NA

Gene position: 1767535-1766762 (Counterclockwise)

Preceding gene: 16273585

Following gene: 16273583

Centisome position: 96.58

GC content: 29.84

Gene sequence:

>774_bases
ATGTTAAAAAAATATTTGATCTCTTTAGATAAAGATATTCAACGTCGGGAATTATTCTTTTCTCAAAAAAATACTGAGGA
TTTCCAAGTGTTTTCGGCCATTAATACCATGCAAAAAGATTGGGATGAATTAGCTGCTATTTTTAATATTGAACAATTTA
AAGCACATTATTTTCGTAATGTCACTAAGGGCGAGATCGGTTGTACATTAAGCCATCTTTCGGTATATCAAAAAATTGTT
GAAGACAACGATATTGCTGAAGATAGCTATGCGTTAGTCTGTGAAGACGATGCTTTATTCCACTCAGATTTTCAGCAAAA
TTTAACCGCACTTTTATCAGAAAAACTTGAGGCTGAAATTATATTGCTTGGACAGTCAAAAATTAATGATTTCAATGATT
TTGATTTAGAAATTAATTATCCGACAACCTTTTCTTTTTTATGCAAAAAAACAGGCGATGTAAATTACGCTTTCCCTTAT
AAAAGTTATTTTGCAGGAACTGTGGGCTATCTTATTAAAAAATCAGCAGCAAGAAGATTTATTCAGCAAATTTCTCAAAA
CAAACCATTTTGGTTAGCGGATGATTTTTTACTCTTTGAACAGAATTTTAATATAAGAAATAAAGTGGTTCGCCCTCTCA
TAGTCATTGAAAATCCTGTATTGATCAGTAATTTAGAAAGTGTTCGTGGATCTTTATCCAATAATTTACTTAAAAAATTA
ATGAAATATCCATTGAAAAAAATCTTTGCGATTAAGAAAAATTTGGCTAATTAA

Upstream 100 bases:

>100_bases
TTTATCTACAAATGTCAGACAAATCTCGTTTAATGAGTGAAGATTATGGCATTGAGAAAATTATTGAAGAATGGAAAGGG
ATTTTATAAGGAATAATTTT

Downstream 100 bases:

>100_bases
AGGAAGGAATTATGTTAAGCATTATTGTGCCTTCTTATAATCGAAAAGCAGAAGTGCCAGCTTTATTAGAAAGTTTAACT
CAACAAACATCGAGTAATTT

Product: putative UDP-GlcNAc--lipooligosaccharide N-acetylglucosaminyl glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLKKYLISLDKDIQRRELFFSQKNTEDFQVFSAINTMQKDWDELAAIFNIEQFKAHYFRNVTKGEIGCTLSHLSVYQKIV
EDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEIILLGQSKINDFNDFDLEINYPTTFSFLCKKTGDVNYAFPY
KSYFAGTVGYLIKKSAARRFIQQISQNKPFWLADDFLLFEQNFNIRNKVVRPLIVIENPVLISNLESVRGSLSNNLLKKL
MKYPLKKIFAIKKNLAN

Sequences:

>Translated_257_residues
MLKKYLISLDKDIQRRELFFSQKNTEDFQVFSAINTMQKDWDELAAIFNIEQFKAHYFRNVTKGEIGCTLSHLSVYQKIV
EDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEIILLGQSKINDFNDFDLEINYPTTFSFLCKKTGDVNYAFPY
KSYFAGTVGYLIKKSAARRFIQQISQNKPFWLADDFLLFEQNFNIRNKVVRPLIVIENPVLISNLESVRGSLSNNLLKKL
MKYPLKKIFAIKKNLAN
>Mature_257_residues
MLKKYLISLDKDIQRRELFFSQKNTEDFQVFSAINTMQKDWDELAAIFNIEQFKAHYFRNVTKGEIGCTLSHLSVYQKIV
EDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEIILLGQSKINDFNDFDLEINYPTTFSFLCKKTGDVNYAFPY
KSYFAGTVGYLIKKSAARRFIQQISQNKPFWLADDFLLFEQNFNIRNKVVRPLIVIENPVLISNLESVRGSLSNNLLKKL
MKYPLKKIFAIKKNLAN

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 25 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LSG4_HAEIN (P71398)

Other databases:

- EMBL:   L42023
- EMBL:   M94855
- PIR:   E64175
- RefSeq:   NP_439839.1
- GeneID:   950869
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1697
- NMPDR:   fig|71421.1.peg.1610
- TIGR:   HI_1697
- HOGENOM:   HBG495261
- OMA:   KGEIGCT
- ProtClustDB:   CLSK870134
- BioCyc:   HINF71421:HI_1697-MONOMER
- InterPro:   IPR002654
- PANTHER:   PTHR10730:SF2

Pfam domain/function: PF01755 Glyco_transf_25

EC number: NA

Molecular weight: Translated: 29865; Mature: 29865

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKYLISLDKDIQRRELFFSQKNTEDFQVFSAINTMQKDWDELAAIFNIEQFKAHYFRN
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VTKGEIGCTLSHLSVYQKIVEDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEI
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEE
ILLGQSKINDFNDFDLEINYPTTFSFLCKKTGDVNYAFPYKSYFAGTVGYLIKKSAARRF
EEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
IQQISQNKPFWLADDFLLFEQNFNIRNKVVRPLIVIENPVLISNLESVRGSLSNNLLKKL
HHHHHCCCCEEEECCEEEEECCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
MKYPLKKIFAIKKNLAN
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKKYLISLDKDIQRRELFFSQKNTEDFQVFSAINTMQKDWDELAAIFNIEQFKAHYFRN
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VTKGEIGCTLSHLSVYQKIVEDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEI
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEE
ILLGQSKINDFNDFDLEINYPTTFSFLCKKTGDVNYAFPYKSYFAGTVGYLIKKSAARRF
EEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHH
IQQISQNKPFWLADDFLLFEQNFNIRNKVVRPLIVIENPVLISNLESVRGSLSNNLLKKL
HHHHHCCCCEEEECCEEEEECCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
MKYPLKKIFAIKKNLAN
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800