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The map label for this gene is wcaA [C]

Identifier: 16273583

GI number: 16273583

Start: 1765866

End: 1766750

Strand: Reverse

Name: wcaA [C]

Synonym: HI1696

Alternate gene names: 16273583

Gene position: 1766750-1765866 (Counterclockwise)

Preceding gene: 16273584

Following gene: 30995469

Centisome position: 96.54

GC content: 33.9

Gene sequence:

>885_bases
ATGTTAAGCATTATTGTGCCTTCTTATAATCGAAAAGCAGAAGTGCCAGCTTTATTAGAAAGTTTAACTCAACAAACATC
GAGTAATTTTGAAGTGATTATTGTGGATGATTGCTCCAAAGAGAGAGTAGTTGTTGAACAAAGTTATTCTTTTCCAGTTA
CAGTGATTCGTAACGAAACCAATCAAGGTGCAGCGGAAAGTCGTAATGTTGGTGCGCGTACATCAAAGGGCGATTGGTTG
CTTTTTCTCGATGATGATGATTGTTTTATGCCGGAAAAATGTGAAAAAGTACTACAAGTGATTGAGCAAAATCCGAATAT
TAATTTTATTTATCATCCAGCTAAGTGTGAAATGGTTAATGAAGGGTTTACCTATGTGACTCAACCGATTGAACCCCAAG
AAATTTCGACAGAACGTATTTTGTTAGCCAATAAGATTGGTGGCATGCCAATGATTGCGATTAAAAAAGAGATGTTTTTA
AAAATAGGTGGATTATCCACCGCACTTCGTTCTTTGGAAGACTATGATTTCTTGTTAAAACTGCTACAAGAGCCAAGTTT
TACTCCTTATAAAATTAATGAACCACTAACTTATTGTACTTTCCATACCAAACGCTCAAGTGTGTCTACGGATACCACTA
ATACGCAAAAAGCCATTGATTATATTCGCGAGCATTATGTGAAAACGGTAGAGCAAGCTCGTAATTTTGATATTAACGCG
AGCTATATTTTGGCTTATCCCCATATTATGAATTTATCGCGTAAAGCGGCAAAATATTATTTTGATATTTTTAAGAAAAC
AAAAAGTATTAAGCAATTTATTATTACTTTGGTTATTTTAATTTCGCCAAAATTAGCTATTAATTTAAAACGGTTGGGAA
AATAA

Upstream 100 bases:

>100_bases
GTGGATCTTTATCCAATAATTTACTTAAAAAATTAATGAAATATCCATTGAAAAAAATCTTTGCGATTAAGAAAAATTTG
GCTAATTAAAGGAAGGAATT

Downstream 100 bases:

>100_bases
AATGAAATTTTCAGTCCTTATGTCCTTATATATTAAGGAAAATCCTCAATTCTTGCGGGAGTGTTTTGAAAGTCTTGTTG
CACAAACTCGTCAAGCAGAT

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDCSKERVVVEQSYSFPVTVIRNETNQGAAESRNVGARTSKGDWL
LFLDDDDCFMPEKCEKVLQVIEQNPNINFIYHPAKCEMVNEGFTYVTQPIEPQEISTERILLANKIGGMPMIAIKKEMFL
KIGGLSTALRSLEDYDFLLKLLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINA
SYILAYPHIMNLSRKAAKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK

Sequences:

>Translated_294_residues
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDCSKERVVVEQSYSFPVTVIRNETNQGAAESRNVGARTSKGDWL
LFLDDDDCFMPEKCEKVLQVIEQNPNINFIYHPAKCEMVNEGFTYVTQPIEPQEISTERILLANKIGGMPMIAIKKEMFL
KIGGLSTALRSLEDYDFLLKLLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINA
SYILAYPHIMNLSRKAAKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK
>Mature_294_residues
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDCSKERVVVEQSYSFPVTVIRNETNQGAAESRNVGARTSKGDWL
LFLDDDDCFMPEKCEKVLQVIEQNPNINFIYHPAKCEMVNEGFTYVTQPIEPQEISTERILLANKIGGMPMIAIKKEMFL
KIGGLSTALRSLEDYDFLLKLLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINA
SYILAYPHIMNLSRKAAKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family

Homologues:

Organism=Escherichia coli, GI1788372, Length=201, Percent_Identity=27.363184079602, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1696_HAEIN (Q48214)

Other databases:

- EMBL:   M94855
- EMBL:   L42023
- PIR:   D64175
- RefSeq:   NP_439838.1
- ProteinModelPortal:   Q48214
- GeneID:   950519
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1696
- NMPDR:   fig|71421.1.peg.1609
- TIGR:   HI_1696
- HOGENOM:   HBG296577
- OMA:   INASYIL
- ProtClustDB:   CLSK870136
- BioCyc:   HINF71421:HI_1696-MONOMER
- InterPro:   IPR001173

Pfam domain/function: PF00535 Glycos_transf_2

EC number: NA

Molecular weight: Translated: 33646; Mature: 33646

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDCSKERVVVEQSYSFPVTVIRNET
CEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCC
NQGAAESRNVGARTSKGDWLLFLDDDDCFMPEKCEKVLQVIEQNPNINFIYHPAKCEMVN
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEC
EGFTYVTQPIEPQEISTERILLANKIGGMPMIAIKKEMFLKIGGLSTALRSLEDYDFLLK
CCCEEEECCCCCCCCCCCCEEEEHHCCCCCEEEEHHHHHHEECCHHHHHHHHHHHHHHHH
LLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINA
HHHCCCCCCEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SYILAYPHIMNLSRKAAKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCC
>Mature Secondary Structure
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDCSKERVVVEQSYSFPVTVIRNET
CEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCC
NQGAAESRNVGARTSKGDWLLFLDDDDCFMPEKCEKVLQVIEQNPNINFIYHPAKCEMVN
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEC
EGFTYVTQPIEPQEISTERILLANKIGGMPMIAIKKEMFLKIGGLSTALRSLEDYDFLLK
CCCEEEECCCCCCCCCCCCEEEEHHCCCCCEEEEHHHHHHEECCHHHHHHHHHHHHHHHH
LLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINA
HHHCCCCCCEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SYILAYPHIMNLSRKAAKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800