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The map label for this gene is rfaB [C]

Identifier: 16273585

GI number: 16273585

Start: 1767547

End: 1768608

Strand: Reverse

Name: rfaB [C]

Synonym: HI1698

Alternate gene names: 16273585

Gene position: 1768608-1767547 (Counterclockwise)

Preceding gene: 16273586

Following gene: 16273584

Centisome position: 96.64

GC content: 30.23

Gene sequence:

>1062_bases
ATGAAAAAAATTGGTTTCTTTATAATGAATATCGGAAGTGCCGGGGGAACGGAGCGCGTTTCTATTAATGTTGCTAATGC
TCTTGCTAAACAGGGATATGATGTTTCTTTTATTAGCATTGGCGGTAACAAGCCTTTTTTCCAAGTTGATGAAAAAATTA
ATATTTACGCAATGAATAAATTGCCCTATTCATTGAAAAAAGATTATTTTTCTATCACTAAAAAATTAAGAGAATTAGTT
AAAGAATTACAGCTGGATACCTTAATTGTGGTTGATGGTGCAATTATGCTTTTTTCTGCTTTGGCGTTGGTTAATTTAAA
TATAAAACATATTTTATGGGAGCATTATTCTTTTAATTTTACGGGCAATCGTCTCGTTCGCACGCTCGGTAAATATTTAG
CTGTAACAACTTGCGATAAAATAGTTACATTGACAGAAGCAGAAAAAACGCTGTGGCAAGAAAAATTTAAAACAAATAAT
ATAATTAGTATTGCTAATCCAAATACGCTTTTGCCAAAGAACAAATTAGCAAAATTGGAAAATAAAACTATTCTATCTGT
AGGGCATTTATTTTCTTATAAAGGTTTTGATTATTTATTAAAAGTTTGGCAAGTTTTGGCAAAAAAATATCCAGATTGGA
ATTTAAAAATAGTGGGTTCTGGCGAGGAAGAAGAAAATTTAAAAAATCTTGCTAAAGCATTGGATATTGAAGATTCAGTT
AATTTTATTCCTCGTACTAATGATGTTTCTTTTTATTATGAAAGCAGTTCAATTTATTGTTTACCTTCACAAACAGAAGG
CTTGCCTTTAGTCGTTATTGAAGCGATGGCATTTGGCTTACCTATTGTTGCCTTTAATTGTTCTCCTGGCGTAAAGCAAT
TAGTGGAACATAAAGAAAATGGTTTTCTTTGTGAACAAAATAATATTGAAGAAATGGTTAAAGGTTTAGATTTATTAATC
AATAATCCTGAACTTTATCTACAAATGTCAGACAAATCTCGTTTAATGAGTGAAGATTATGGCATTGAGAAAATTATTGA
AGAATGGAAAGGGATTTTATAA

Upstream 100 bases:

>100_bases
AATGTAGAAATCCGTTTTATTAGAACGAGTATTCCAAGATGGCAATTCTGTTACGATTCATTTCCAGACCTTGGATTAAC
GATTTATAAGGAAATTTAAA

Downstream 100 bases:

>100_bases
GGAATAATTTTATGTTAAAAAAATATTTGATCTCTTTAGATAAAGATATTCAACGTCGGGAATTATTCTTTTCTCAAAAA
AATACTGAGGATTTCCAAGT

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKKIGFFIMNIGSAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNKLPYSLKKDYFSITKKLRELV
KELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNFTGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNN
IISIANPNTLLPKNKLAKLENKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSV
NFIPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFLCEQNNIEEMVKGLDLLI
NNPELYLQMSDKSRLMSEDYGIEKIIEEWKGIL

Sequences:

>Translated_353_residues
MKKIGFFIMNIGSAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNKLPYSLKKDYFSITKKLRELV
KELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNFTGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNN
IISIANPNTLLPKNKLAKLENKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSV
NFIPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFLCEQNNIEEMVKGLDLLI
NNPELYLQMSDKSRLMSEDYGIEKIIEEWKGIL
>Mature_353_residues
MKKIGFFIMNIGSAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNKLPYSLKKDYFSITKKLRELV
KELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNFTGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNN
IISIANPNTLLPKNKLAKLENKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSV
NFIPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFLCEQNNIEEMVKGLDLLI
NNPELYLQMSDKSRLMSEDYGIEKIIEEWKGIL

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family

Homologues:

Organism=Escherichia coli, GI226510984, Length=337, Percent_Identity=22.2551928783383, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1788357, Length=134, Percent_Identity=29.8507462686567, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1698_HAEIN (O05083)

Other databases:

- EMBL:   L42023
- PIR:   F64175
- RefSeq:   NP_439840.1
- ProteinModelPortal:   O05083
- GeneID:   950521
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1698
- NMPDR:   fig|71421.1.peg.1611
- TIGR:   HI_1698
- HOGENOM:   HBG710359
- OMA:   CLSSRYE
- ProtClustDB:   CLSK808552
- BioCyc:   HINF71421:HI_1698-MONOMER
- InterPro:   IPR001296

Pfam domain/function: PF00534 Glycos_transf_1

EC number: 2.4.1.-

Molecular weight: Translated: 40005; Mature: 40005

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xecb8894)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGFFIMNIGSAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNK
CCCEEEEEEEECCCCCCEEEEEEHHHHHHHCCCCEEEEEECCCCCCEEECCEEEEEEEEC
LPYSLKKDYFSITKKLRELVKELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNF
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCHHHEEEEEEEECC
TGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNNIISIANPNTLLPKNKLAKLE
CHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHC
NKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSV
CCEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
NFIPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKEN
CCCCCCCCEEEEEECCEEEEECCCCCCCCHHEEHHHHHCCCEEEEECCHHHHHHHHHCCC
GFLCEQNNIEEMVKGLDLLINNPELYLQMSDKSRLMSEDYGIEKIIEEWKGIL
CEEECCCCHHHHHHHHHEEECCCEEEEEECCHHHHHHCCCCHHHHHHHHCCCH
>Mature Secondary Structure
MKKIGFFIMNIGSAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNK
CCCEEEEEEEECCCCCCEEEEEEHHHHHHHCCCCEEEEEECCCCCCEEECCEEEEEEEEC
LPYSLKKDYFSITKKLRELVKELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNF
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCHHHEEEEEEEECC
TGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNNIISIANPNTLLPKNKLAKLE
CHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHC
NKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSV
CCEEEEHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCC
NFIPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKEN
CCCCCCCCEEEEEECCEEEEECCCCCCCCHHEEHHHHHCCCEEEEECCHHHHHHHHHCCC
GFLCEQNNIEEMVKGLDLLINNPELYLQMSDKSRLMSEDYGIEKIIEEWKGIL
CEEECCCCHHHHHHHHHEEECCCEEEEEECCHHHHHHCCCCHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800