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The map label for this gene is 16273317

Identifier: 16273317

GI number: 16273317

Start: 1504706

End: 1505890

Strand: Reverse

Name: 16273317

Synonym: HI1410

Alternate gene names: NA

Gene position: 1505890-1504706 (Counterclockwise)

Preceding gene: 16273318

Following gene: 16273316

Centisome position: 82.28

GC content: 41.18

Gene sequence:

>1185_bases
GTGTTCCGTGAAATTCAGAAATCGATTTCTGATTCTGTGATTCAGATGTTGGCAGATCAGATTGAAATGCTTAGCTTGCA
AGCCTTTTTTGATGTTCAGAAAACGCAAATTATCGGGCAAAACGGTTCACGCTTCACGTTTGCGGGGCTGAAAACTAACA
TTACTTCGATTAAGTCGATGACAGGCATTGATGTAGTTTGGGTAGAAGAAGGCGAGAATGTTTCAAAAGAAAGTTGGGAT
ATATTGATTCCAACCATTCGTGAAGACGGTTCGCAGATTATTGTGAGCTTTAACCCGAAGAATATTCTTGATGACACCTA
TCAACGTTTTGTGATTCATCCGCCTGAGCGGTGTAAATCGGTCTTAGTGAATTGGCAAGACAACCCATATTTTCCGAAAG
AATTAATGGAAGATATGGAGCAGATGCGTGAGCGTGATTACGAGCTTTATCGTCACGTTTATGAGGGCGAGCCTGTTGCA
GACAGTGATTTGGCGATTATTAAGCCTGTATGGATTGAATATGCGGTAGATGCGCATCTCAAGCTCGGTTTTACCGCTAA
AGGAATGAAGAAAGTTGGCTTTGATGTGGCTGATGAGGGTGCGGATAGTAACGCTAATGCATTTGTTCACGGTTCTGTGG
TGCTTGACATTGAAGTTTGGAAAAATGGCGATGTGATTGATTCCGCCAACCGAACAAATCAAAGTGCGGTCAAATTTAAA
GCTGATTTGATTATATTCGATAGTATTGGCGTGGGGGCGGGAGTAAAAGCTCACTTTAAACGCTTGCCAAAATCTTTACA
AGTGGAAGGATTTAATGCTGGTGGTGCAGTTGCTTATCCCGAGCGTGAATATATCAAAGGAAAAAAGAATCAAGATATGT
TTTCGAACATTAAAGCCCAATCTTGGTGGGCGTTGAGAGATAGATTCTATAAAACCTATCGAGCAGTAAAGTATGGGGAT
GTTTATCCTGACGATGAACTGATAAGCCTATCGAGCAAAATCAAAGAGCTTGAGTATTTGAAAGCAGAATTATCACGTCC
TCGTGTTGATTATGACAATAACGGGCGGGTAAAGGTTGAAAGCAAAAAGGATATGAAAAAACGTGGCATACCTTCTCCAA
ATATGGCGGATGCTTTAGTTATGTGCTACGCCCCGACAAAACCTAAATCACTACTGGATTTATAA

Upstream 100 bases:

>100_bases
GGCGGTTTATTATTTTCTACGGTGGGCGAGGTTCAGGTAAAAGTTTTAGTATCGCTAGAGCATTAGTATTGCGAGCCTAT
CAATCGCCTGTTCGAGTTTT

Downstream 100 bases:

>100_bases
GATGAATATTTTAGATGGCATCAAATCACTTGCGCTAAAGTTAGGTAGCAAACAAGACCAGACATATTATGCTCGTGGGC
TTAGTTTAACCGATGACTTA

Product: terminase large subunit-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MFREIQKSISDSVIQMLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWD
ILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVA
DSDLAIIKPVWIEYAVDAHLKLGFTAKGMKKVGFDVADEGADSNANAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFK
ADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGD
VYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL

Sequences:

>Translated_394_residues
MFREIQKSISDSVIQMLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWD
ILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVA
DSDLAIIKPVWIEYAVDAHLKLGFTAKGMKKVGFDVADEGADSNANAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFK
ADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGD
VYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL
>Mature_394_residues
MFREIQKSISDSVIQMLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSMTGIDVVWVEEGENVSKESWD
ILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKSVLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVA
DSDLAIIKPVWIEYAVDAHLKLGFTAKGMKKVGFDVADEGADSNANAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFK
ADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQSWWALRDRFYKTYRAVKYGD
VYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVESKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL

Specific function: Unknown

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1410_HAEIN (P44184)

Other databases:

- EMBL:   L42023
- PIR:   E64028
- RefSeq:   NP_439561.1
- GeneID:   950727
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1410
- NMPDR:   fig|71421.1.peg.1344
- TIGR:   HI_1410
- HOGENOM:   HBG391124
- OMA:   RENAYAR
- ProtClustDB:   CLSK808518
- BioCyc:   HINF71421:HI_1410-MONOMER
- InterPro:   IPR006701
- InterPro:   IPR006437
- TIGRFAMs:   TIGR01547

Pfam domain/function: PF04466 Terminase_3

EC number: NA

Molecular weight: Translated: 44783; Mature: 44783

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFREIQKSISDSVIQMLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHC
TGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKS
CCEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHEECCCHHHHHH
VLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIEYAVDAHL
HEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHEEEEEECCEE
KLGFTAKGMKKVGFDVADEGADSNANAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFK
EECCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEECCCCCCCCCCEEEE
ADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQ
EEEEEEECCCCCCCHHHHHHHCCHHEEEECCCCCCEEECCCHHHHCCCCCCHHHHCCCHH
SWWALRDRFYKTYRAVKYGDVYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVE
HHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
SKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL
CHHHHHHCCCCCCCCCCEEEEEECCCCCHHHCCC
>Mature Secondary Structure
MFREIQKSISDSVIQMLADQIEMLSLQAFFDVQKTQIIGQNGSRFTFAGLKTNITSIKSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHHC
TGIDVVWVEEGENVSKESWDILIPTIREDGSQIIVSFNPKNILDDTYQRFVIHPPERCKS
CCEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHEECCCHHHHHH
VLVNWQDNPYFPKELMEDMEQMRERDYELYRHVYEGEPVADSDLAIIKPVWIEYAVDAHL
HEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHEEEEEECCEE
KLGFTAKGMKKVGFDVADEGADSNANAFVHGSVVLDIEVWKNGDVIDSANRTNQSAVKFK
EECCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEECCCCCCCCCCEEEE
ADLIIFDSIGVGAGVKAHFKRLPKSLQVEGFNAGGAVAYPEREYIKGKKNQDMFSNIKAQ
EEEEEEECCCCCCCHHHHHHHCCHHEEEECCCCCCEEECCCHHHHCCCCCCHHHHCCCHH
SWWALRDRFYKTYRAVKYGDVYPDDELISLSSKIKELEYLKAELSRPRVDYDNNGRVKVE
HHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
SKKDMKKRGIPSPNMADALVMCYAPTKPKSLLDL
CHHHHHHCCCCCCCCCCEEEEEECCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023