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The map label for this gene is 16273318

Identifier: 16273318

GI number: 16273318

Start: 1506035

End: 1506550

Strand: Reverse

Name: 16273318

Synonym: HI1411

Alternate gene names: NA

Gene position: 1506550-1506035 (Counterclockwise)

Preceding gene: 16273319

Following gene: 16273317

Centisome position: 82.32

GC content: 39.34

Gene sequence:

>516_bases
ATGTCAGACGTGAAAGGAAAATCTACGTCTGGTCGTGGATTAACACCTAAACAAGAAAAATTTTGCCAGCTTTATATTGA
GCTGGGGAATGCCAGTGAAGCATATCGGCAGAGTTATGATTGCTCAAAAATGACAACTGAAGTTATCAATGTTAAGGCAA
GTGAGTTACTTAATAAGAACGGTAAGATTACGGTAAGGGTTGAAGAACTAAGACAAGCCCATCAACAACGCCATAATCTT
ACCCTAGATAATATCATTGCGGACTTGCAAGAGTATCGTGATATTTGTATGGGAAGAAAGCCACTTACTATTACCACTGT
GGTAAAAAATGCTCAAGAAGGAACGGCACAAAGCGTTAATACCGAATGTTTCGTTTTTGAACCGACAGGTGCAAATAAAG
CCCTTGAATTGCTTGGGAAGCATTTAGGGATGTTTACCAATAAAGTTGATGTAACAACTGATGGCAAGCCCTTACCTACT
GTGATTAATGTGACATTTAGCGATGAGCCAGCTTAA

Upstream 100 bases:

>100_bases
GTTGAGGGAATGGAAGGGCGATAAGCCTGTGCTAGAAGCAACTTTAAAACTTTTTGAAGATAAGATGCAGATTGAACTGC
CTATTAAGTAAGGATTTCCT

Downstream 100 bases:

>100_bases
TATTCAATTTCCGACAAAATTCAAACCGCTCTTTGAATCTATTTGGCGGTTTATTATTTTCTACGGTGGGCGAGGTTCAG
GTAAAAGTTTTAGTATCGCT

Product: terminase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKNGKITVRVEELRQAHQQRHNL
TLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPT
VINVTFSDEPA

Sequences:

>Translated_171_residues
MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKNGKITVRVEELRQAHQQRHNL
TLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPT
VINVTFSDEPA
>Mature_170_residues
SDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKNGKITVRVEELRQAHQQRHNLT
LDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTV
INVTFSDEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1411_HAEIN (Q57374)

Other databases:

- EMBL:   L42023
- PIR:   C64122
- RefSeq:   NP_439562.1
- ProteinModelPortal:   Q57374
- SMR:   Q57374
- GeneID:   950482
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1411
- NMPDR:   fig|71421.1.peg.1345
- TIGR:   HI_1411
- HOGENOM:   HBG095849
- OMA:   MKSESIN
- ProtClustDB:   CLSK892405
- BioCyc:   HINF71421:HI_1411-MONOMER
- InterPro:   IPR005335

Pfam domain/function: PF03592 Terminase_2

EC number: NA

Molecular weight: Translated: 18966; Mature: 18835

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKN
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
GKITVRVEELRQAHQQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVN
CCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCC
TECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA
CEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
SDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVINVKASELLNKN
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
GKITVRVEELRQAHQQRHNLTLDNIIADLQEYRDICMGRKPLTITTVVKNAQEGTAQSVN
CCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCCCCCCC
TECFVFEPTGANKALELLGKHLGMFTNKVDVTTDGKPLPTVINVTFSDEPA
CEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800