| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16273316
Identifier: 16273316
GI number: 16273316
Start: 1503394
End: 1504704
Strand: Reverse
Name: 16273316
Synonym: HI1409
Alternate gene names: NA
Gene position: 1504704-1503394 (Counterclockwise)
Preceding gene: 16273317
Following gene: 16273315
Centisome position: 82.22
GC content: 39.74
Gene sequence:
>1311_bases ATGAATATTTTAGATGGCATCAAATCACTTGCGCTAAAGTTAGGTAGCAAACAAGACCAGACATATTATGCTCGTGGGCT TAGTTTAACCGATGACTTAATGCAAATCGAAGCATTATGGCGTGATAACTGGATTGCAAATAAGGTTTGTATTAAACGTT CGGAAGATATGGTGCGTAATTGGCGTGATATTTTCTCGAATGACTTGAAATCTGAACAGCTAGACGAGTTCACTAAGCTT GAACGTAGATTAAAACTGCGTGAGACATTAACTAAAGCGTTGCAATGGTCTAGTTTGTATGGGGCGGTGGGTTTATTGGT TGTCACTGACACAATTAACATCACTTCGCCATTGCAGCCTACAGAACGATTAAAACGATTAATTATCTTACCTAAATGGA AAATCTCACCGACAGGACAACGAGATGACGATGTATTTTCGCCAAACTTTGGTCGATACAGTGAATATACCATTACTGGC GGCACACAATCTGTTTCAGTGCATCATTCACGCTTATTAATCATCAATGCCAATGATGCGCCATTATCTGATAACGATAT TTGGGGTGTATCAGACCTTGAAAAGATTATTGATGTACTTAAACGCTTTGATAGTGCCTCAGCGAATGTCGGCGACCTTA TTTTTGAAAGTAAAATCGATATTTTCAAAATTGCAGGGTTATCTGACAAGATTTCAGCTGGCTTAGAAAATGATGTGGCT CACGTTATTTCAGCGGTGCAGTCGATTAAATCAGCAACCAATAGTCTGTTGCTTGATGCGGAAAATGAGTACGACCGAAA AGAATTATCTTTTGGTGGGTTAAAAGATTTATTGACAGAGTTTCGCAATGCGGTGGCAGGTGCGGCAGATATGCCAGTCA CCATTTTGTTTGGGCAATCTGTTTCGGGATTGGCAAGTGGAGATGAGGATATTCAAAACTACCACGAATCCATTCATCGA TTGCAAGAAACAAGATTGCGTCCTGTGCTTGAAGTGCTTGATACACTGCTATGCAATGAATTATTTGGTGGGCAACCTGA TGACTGGTGGTTTGAGTTTTTACCATTGACGGTGGTTAAACAAGAACAACAAGTCAATATGCTTAATACCTTTGCTACAG CGGCAAATACGTTAATTCAAAATGGCGTAGTAAATGAATATCAAGTAGCAAACGAACTCCGAGAAAGTGGTTTATTTGCC AATATCTCTGCTGATGACATTGAGGAAATGAAAAATGCTAATGAACTTGCCAGAAATTTTGAAGAACCAGAAGGCGAGAG CACGCAAGTTCAAGCCAGTGAAGATGAGTAA
Upstream 100 bases:
>100_bases AAGGATATGAAAAAACGTGGCATACCTTCTCCAAATATGGCGGATGCTTTAGTTATGTGCTACGCCCCGACAAAACCTAA ATCACTACTGGATTTATAAG
Downstream 100 bases:
>100_bases GAGAACGGAGCTTTGGTATAGACAACAGCTTAAGCAGTTCGTCAAAATGATGACCAATGATGTAGAAAGAGCCCTGCAAC AACCGCAAGGCTCTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKL ERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTITG GTQSVSVHHSRLLIINANDAPLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVA HVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHR LQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFA NISADDIEEMKNANELARNFEEPEGESTQVQASEDE
Sequences:
>Translated_436_residues MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKL ERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTITG GTQSVSVHHSRLLIINANDAPLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVA HVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHR LQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFA NISADDIEEMKNANELARNFEEPEGESTQVQASEDE >Mature_436_residues MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRNWRDIFSNDLKSEQLDEFTKL ERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQPTERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTITG GTQSVSVHHSRLLIINANDAPLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVA HVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQSVSGLASGDEDIQNYHESIHR LQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVKQEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFA NISADDIEEMKNANELARNFEEPEGESTQVQASEDE
Specific function: Unknown
COG id: COG3567
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1409_HAEIN (P44183)
Other databases:
- EMBL: L42023 - PIR: D64028 - RefSeq: NP_439560.1 - GeneID: 950321 - GenomeReviews: L42023_GR - KEGG: hin:HI1409 - NMPDR: fig|71421.1.peg.1343 - TIGR: HI_1409 - HOGENOM: HBG095848 - OMA: TIKWARL - ProtClustDB: CLSK272132 - BioCyc: HINF71421:HI_1409-MONOMER - InterPro: IPR006445 - TIGRFAMs: TIGR01555
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48922; Mature: 48922
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRN CCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH WRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCH TERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTITGGTQSVSVHHSRLLIINANDA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEECCCC PLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVA CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCHHHHCCCHHHHH HVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQS HHHHHHHHHHHHHHHEEEECCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC VSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH QEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNANELARNF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCC EEPEGESTQVQASEDE CCCCCCCCEEECCCCC >Mature Secondary Structure MNILDGIKSLALKLGSKQDQTYYARGLSLTDDLMQIEALWRDNWIANKVCIKRSEDMVRN CCHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH WRDIFSNDLKSEQLDEFTKLERRLKLRETLTKALQWSSLYGAVGLLVVTDTINITSPLQP HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCH TERLKRLIILPKWKISPTGQRDDDVFSPNFGRYSEYTITGGTQSVSVHHSRLLIINANDA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEECCCC PLSDNDIWGVSDLEKIIDVLKRFDSASANVGDLIFESKIDIFKIAGLSDKISAGLENDVA CCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCCCHHHHCCCHHHHH HVISAVQSIKSATNSLLLDAENEYDRKELSFGGLKDLLTEFRNAVAGAADMPVTILFGQS HHHHHHHHHHHHHHHEEEECCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC VSGLASGDEDIQNYHESIHRLQETRLRPVLEVLDTLLCNELFGGQPDDWWFEFLPLTVVK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH QEQQVNMLNTFATAANTLIQNGVVNEYQVANELRESGLFANISADDIEEMKNANELARNF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHCC EEPEGESTQVQASEDE CCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800