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The map label for this gene is ccmE [H]

Identifier: 16273021

GI number: 16273021

Start: 1156091

End: 1156612

Strand: Direct

Name: ccmE [H]

Synonym: HI1093

Alternate gene names: 16273021

Gene position: 1156091-1156612 (Clockwise)

Preceding gene: 16273020

Following gene: 16273022

Centisome position: 63.17

GC content: 41.38

Gene sequence:

>522_bases
ATGAATCCAAGACGTAAATCCAGATTTAAATTAGTCATTTTTGTTGTGCTCGGCATTGCAATTGCAAGTGGATTGATGCT
GTATGCGTTACGTCAAAATATTGACTTGTTTTATACGCCATCTGAAGTGATCCAAGGTAAGGATAATAACCCTAATCAAA
AACCAGAAGTGGGGCAGCGTATTCGTGTTGGTGGTATGGTGGTTGAAGGCACGGTAGTGCGTGATCCAAAAAGCTTAAAA
GTGCGGTTTGATTTAAATGATATTGGTCCTGCGATCACGGTTGAATATGAAGGCATTTTGCCAGATCTTTTCCGTGAAGG
ACAAGGTATTGTGGCTCAAGGTGTATTAACTCAGCCAACTGTTTTAACTGCAACAGAAGTGTTGGCTAAACACGATGAGA
ATTATGTGCCGCCAGAATTAGGCGAAAAAATGCAAAAAGTACATAAACCAATGGGAATTGAGGCAGCGGACTTAAAAGGC
GAAAGCGCGCGTGATCGTCAAGAAAAAGAAGGCGCAAAATGA

Upstream 100 bases:

>100_bases
TTGTTCAAAGCGTCAAGCAACGCAAGACAGTATTACAAAATGTCTTGCGTGAGAAACAACGCGAAGAACGTTTACAACAA
GCAAATAAGGGGAATACACT

Downstream 100 bases:

>100_bases
TTGCTGAATTAGGAAATTACGCACTTGCTTTAAGTTTAGCTGTATCGCTTATGTTGGCGATTTTCCCTTTGTGGGGGGCG
GAAAAGGGCAATGCACAATT

Product: cytochrome c-type biogenesis protein CcmE

Products: NA

Alternate protein names: Cytochrome c maturation protein E; Heme chaperone CcmE [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MNPRRKSRFKLVIFVVLGIAIASGLMLYALRQNIDLFYTPSEVIQGKDNNPNQKPEVGQRIRVGGMVVEGTVVRDPKSLK
VRFDLNDIGPAITVEYEGILPDLFREGQGIVAQGVLTQPTVLTATEVLAKHDENYVPPELGEKMQKVHKPMGIEAADLKG
ESARDRQEKEGAK

Sequences:

>Translated_173_residues
MNPRRKSRFKLVIFVVLGIAIASGLMLYALRQNIDLFYTPSEVIQGKDNNPNQKPEVGQRIRVGGMVVEGTVVRDPKSLK
VRFDLNDIGPAITVEYEGILPDLFREGQGIVAQGVLTQPTVLTATEVLAKHDENYVPPELGEKMQKVHKPMGIEAADLKG
ESARDRQEKEGAK
>Mature_173_residues
MNPRRKSRFKLVIFVVLGIAIASGLMLYALRQNIDLFYTPSEVIQGKDNNPNQKPEVGQRIRVGGMVVEGTVVRDPKSLK
VRFDLNDIGPAITVEYEGILPDLFREGQGIVAQGVLTQPTVLTATEVLAKHDENYVPPELGEKMQKVHKPMGIEAADLKG
ESARDRQEKEGAK

Specific function: Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH [H]

COG id: COG2332

COG function: function code O; Cytochrome c-type biogenesis protein CcmE

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmE/CycJ family [H]

Homologues:

Organism=Escherichia coli, GI1788525, Length=149, Percent_Identity=57.7181208053691, Blast_Score=173, Evalue=5e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004329
- InterPro:   IPR012340 [H]

Pfam domain/function: PF03100 CcmE [H]

EC number: NA

Molecular weight: Translated: 19149; Mature: 19149

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRRKSRFKLVIFVVLGIAIASGLMLYALRQNIDLFYTPSEVIQGKDNNPNQKPEVGQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCCCCCE
IRVGGMVVEGTVVRDPKSLKVRFDLNDIGPAITVEYEGILPDLFREGQGIVAQGVLTQPT
EEECCEEEECEEEECCCCEEEEEEHHHCCCEEEEEECCCCHHHHHCCCCEEECCCCCCCH
VLTATEVLAKHDENYVPPELGEKMQKVHKPMGIEAADLKGESARDRQEKEGAK
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MNPRRKSRFKLVIFVVLGIAIASGLMLYALRQNIDLFYTPSEVIQGKDNNPNQKPEVGQR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCCCCCE
IRVGGMVVEGTVVRDPKSLKVRFDLNDIGPAITVEYEGILPDLFREGQGIVAQGVLTQPT
EEECCEEEECEEEECCCCEEEEEEHHHCCCEEEEEECCCCHHHHHCCCCEEECCCCCCCH
VLTATEVLAKHDENYVPPELGEKMQKVHKPMGIEAADLKGESARDRQEKEGAK
HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA