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The map label for this gene is napF [C]

Identifier: 16272975

GI number: 16272975

Start: 1108431

End: 1108931

Strand: Reverse

Name: napF [C]

Synonym: HI1043

Alternate gene names: 16272975

Gene position: 1108931-1108431 (Counterclockwise)

Preceding gene: 16272976

Following gene: 16272971

Centisome position: 60.59

GC content: 41.32

Gene sequence:

>501_bases
ATGAAAAACGAAGCCTATTATCAGGCTTATTTAAGCCACCATCACATTTCTCGTAGAGGACTATTGCGTCATGTATTTCC
AGCTACAAAATCAACAATAGAAAAAACGCAGTCTCGTCCTCCCTTTTCAGCACGAGAAGATTTATTTTCCGCCGTCTGCA
ATGGTTGTGGGGAATGCGCTTCAGCTTGTCCTAATGGTTTAATTCAACTAAAACAGCAACAAGCCACCCTTGAAATTGAC
TACGCACCTTGTGATTTGTGTGGTAAATGCGCAGAAGTTTGTCCGACAAATGCACTACATCCTAATTTTCCAGGAGATAC
ATTACTTCGTCCACAATTTTCCTCAGCCTGTTTAATCCTACAAAATCAAACCTGTCCAGACTGCCAAACCGCTTGCCCAC
TACAAGCAATCTCCAGCACTTTAGAGATTGATAATGAACGTTGCAATGGGTGCGGAGAATGTAAAATTACCTGTTTTGTC
GCAGCCATTACACTTAAATAA

Upstream 100 bases:

>100_bases
CTGATTTTTATCAAGCTCTTGCATTACTTACCATAAAAACTTTACAACAATGGCAAGTAGATTTACATATTAATGTACCG
ACAGTAAGATTTTATCGATA

Downstream 100 bases:

>100_bases
AAAACCTTAATTTTCCACCGCACTTTCCTTCTAACATTTGACACCCCTAGCCCTTACACCTATTATTCCGTAGTTATTTA
TTTAAGATTTACAGAACAAA

Product: ferredoxin-type protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECASACPNGLIQLKQQQATLEID
YAPCDLCGKCAEVCPTNALHPNFPGDTLLRPQFSSACLILQNQTCPDCQTACPLQAISSTLEIDNERCNGCGECKITCFV
AAITLK

Sequences:

>Translated_166_residues
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECASACPNGLIQLKQQQATLEID
YAPCDLCGKCAEVCPTNALHPNFPGDTLLRPQFSSACLILQNQTCPDCQTACPLQAISSTLEIDNERCNGCGECKITCFV
AAITLK
>Mature_166_residues
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECASACPNGLIQLKQQQATLEID
YAPCDLCGKCAEVCPTNALHPNFPGDTLLRPQFSSACLILQNQTCPDCQTACPLQAISSTLEIDNERCNGCGECKITCFV
AAITLK

Specific function: Involved In Electron Transfer. [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains

Homologues:

Organism=Escherichia coli, GI1788536, Length=159, Percent_Identity=31.4465408805031, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1043_HAEIN (P44101)

Other databases:

- EMBL:   L42023
- PIR:   B64019
- RefSeq:   NP_439202.1
- ProteinModelPortal:   P44101
- SMR:   P44101
- GeneID:   950023
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1043
- NMPDR:   fig|71421.1.peg.1003
- TIGR:   HI_1043
- HOGENOM:   HBG492386
- OMA:   NGCGECK
- ProtClustDB:   CLSK870603
- BioCyc:   HINF71421:HI_1043-MONOMER
- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004496
- TIGRFAMs:   TIGR00402

Pfam domain/function: PF00037 Fer4

EC number: NA

Molecular weight: Translated: 18144; Mature: 18144

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
9.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SACPNGLIQLKQQQATLEIDYAPCDLCGKCAEVCPTNALHPNFPGDTLLRPQFSSACLIL
HHCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
QNQTCPDCQTACPLQAISSTLEIDNERCNGCGECKITCFVAAITLK
ECCCCCCHHHCCCHHHHHHHHHCCCHHCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SACPNGLIQLKQQQATLEIDYAPCDLCGKCAEVCPTNALHPNFPGDTLLRPQFSSACLIL
HHCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
QNQTCPDCQTACPLQAISSTLEIDNERCNGCGECKITCFVAAITLK
ECCCCCCHHHCCCHHHHHHHHHCCCHHCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800