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The map label for this gene is yafJ [C]

Identifier: 16272971

GI number: 16272971

Start: 1101593

End: 1102477

Strand: Reverse

Name: yafJ [C]

Synonym: HI1037

Alternate gene names: 16272971

Gene position: 1102477-1101593 (Counterclockwise)

Preceding gene: 16272975

Following gene: 16272965

Centisome position: 60.24

GC content: 34.92

Gene sequence:

>885_bases
ATGGTGTTAAATCACTCACATATTGTGAGGTTATATCTAATTAAAGTTATGTGTCAATTACTCGGAATGAATTGCAATAC
GCCAACGGATATTGTTTTTTCTTTTGAAGGTTTCCGTCGTCGTGCAGGTTTAACAGATTGCCATTCAGATGGCTTTGGAA
TTGCGTTTTTTGAAGGACGTGGTGTACGTATTTTTCGTGATAATCAAGCAGCCAGTCTTTCCCCCATCGCAGATTGTATA
AAACAATATAATATTAAATCTCTTAATGTTATTGCACATATTCGTAAAGCAACACAAGGCGAAGTCAATATTGAAAACAC
CCATCCGTTCATTCGTGAAATTTGGGGACAAAACTGGGTTTTTGCGCATAATGGTAATTTAAAAAACTTACCAGATATGA
CAGATCATTTTTTACAGCCAATAGGTTCTACAGATTCTGAAGCTGCTTTCTGTTATATGGCTGAATATCTTAAAAACACT
TTCCGCAAAAAACCAAGTGAAATGGAAATTTTTGAAGCAATTCAAAAAGTAACAAAAGGACTTGCTCAACACGGTACGTT
TAATTTCATTCTTTCTAATGGCGAGTGGATGATTGCACATTGCTCAACAAACTTACATTATGTTATGCGAAAAGCACCTT
TTGGCAAAGCTCACCGTATTGATGATGATGGAGTAATTGATTTTAGCTATTATGCAAAAGCAGGAGATAAGGTCAATATC
ATCACAACATTTCCTTTAACCAAAAATGAATCTTGGACAAAAATGGAAAATGGTGGATTTGTGTTTTTTAAAAATGGAGA
GAAAATCGCCGAAGTTATTGGGACGCCAAAAGAAGCGATTGATGATGGTACTTTAGGTAATAGGACAATAAATTCTGCTA
TTTAA

Upstream 100 bases:

>100_bases
AATCTCGATTTTTAAAGAATAATAGATTAAATAAGATTTCTATCATTAATATCTATACAACATAAAAATTCATTAAATCT
CTCTTGATATTCTCCCTATA

Downstream 100 bases:

>100_bases
ATGTCAATGTAAATAAACTTCCCCTTATTTTTATAAAAGAATTTTATATCTTTTATAAGAATTATAAAAATCAAAAACCT
CTAAAAACGAAATAAAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MVLNHSHIVRLYLIKVMCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGRGVRIFRDNQAASLSPIADCI
KQYNIKSLNVIAHIRKATQGEVNIENTHPFIREIWGQNWVFAHNGNLKNLPDMTDHFLQPIGSTDSEAAFCYMAEYLKNT
FRKKPSEMEIFEAIQKVTKGLAQHGTFNFILSNGEWMIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNI
ITTFPLTKNESWTKMENGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRTINSAI

Sequences:

>Translated_294_residues
MVLNHSHIVRLYLIKVMCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGRGVRIFRDNQAASLSPIADCI
KQYNIKSLNVIAHIRKATQGEVNIENTHPFIREIWGQNWVFAHNGNLKNLPDMTDHFLQPIGSTDSEAAFCYMAEYLKNT
FRKKPSEMEIFEAIQKVTKGLAQHGTFNFILSNGEWMIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNI
ITTFPLTKNESWTKMENGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRTINSAI
>Mature_294_residues
MVLNHSHIVRLYLIKVMCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGRGVRIFRDNQAASLSPIADCI
KQYNIKSLNVIAHIRKATQGEVNIENTHPFIREIWGQNWVFAHNGNLKNLPDMTDHFLQPIGSTDSEAAFCYMAEYLKNT
FRKKPSEMEIFEAIQKVTKGLAQHGTFNFILSNGEWMIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNI
ITTFPLTKNESWTKMENGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRTINSAI

Specific function: Unknown

COG id: COG0121

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain

Homologues:

Organism=Escherichia coli, GI1786417, Length=254, Percent_Identity=47.6377952755905, Blast_Score=261, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1037_HAEIN (P44098)

Other databases:

- EMBL:   L42023
- PIR:   H64018
- RefSeq:   NP_439197.1
- ProteinModelPortal:   P44098
- SMR:   P44098
- GeneID:   950020
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1037
- NMPDR:   fig|71421.1.peg.999
- TIGR:   HI_1037
- HOGENOM:   HBG284516
- OMA:   CNTPTDI
- ProtClustDB:   CLSK866480
- BioCyc:   HINF71421:HI_1037-MONOMER
- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932
- PANTHER:   PTHR11907

Pfam domain/function: PF00310 GATase_2

EC number: NA

Molecular weight: Translated: 33182; Mature: 33182

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS51278 GATASE_TYPE_2

Important sites: ACT_SITE 18-18

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLNHSHIVRLYLIKVMCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCEEEEEECC
GVRIFRDNQAASLSPIADCIKQYNIKSLNVIAHIRKATQGEVNIENTHPFIREIWGQNWV
CEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEE
FAHNGNLKNLPDMTDHFLQPIGSTDSEAAFCYMAEYLKNTFRKKPSEMEIFEAIQKVTKG
EEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAQHGTFNFILSNGEWMIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNI
HHHCCCEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEHHHCCCCEEEE
ITTFPLTKNESWTKMENGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRTINSAI
EEECCCCCCCCCCEECCCCEEEEECCHHHHHHHCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLNHSHIVRLYLIKVMCQLLGMNCNTPTDIVFSFEGFRRRAGLTDCHSDGFGIAFFEGR
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCEEEEEECC
GVRIFRDNQAASLSPIADCIKQYNIKSLNVIAHIRKATQGEVNIENTHPFIREIWGQNWV
CEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHCCCCEE
FAHNGNLKNLPDMTDHFLQPIGSTDSEAAFCYMAEYLKNTFRKKPSEMEIFEAIQKVTKG
EEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LAQHGTFNFILSNGEWMIAHCSTNLHYVMRKAPFGKAHRIDDDGVIDFSYYAKAGDKVNI
HHHCCCEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEHHHCCCCEEEE
ITTFPLTKNESWTKMENGGFVFFKNGEKIAEVIGTPKEAIDDGTLGNRTINSAI
EEECCCCCCCCCCEECCCCEEEEECCHHHHHHHCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800