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The map label for this gene is ureF

Identifier: 16272973

GI number: 16272973

Start: 1104411

End: 1105415

Strand: Direct

Name: ureF

Synonym: HI1040

Alternate gene names: 16272973

Gene position: 1104411-1105415 (Clockwise)

Preceding gene: 16272972

Following gene: 16272974

Centisome position: 60.35

GC content: 31.44

Gene sequence:

>1005_bases
ATGCTATACTACGTCCCTCGCAGGGAGAAAAGCTATATGAATATAAAACCTCATTTATTTGGGCTTAATCGCTCAAATCG
TGATTTTTCATTAAGAGAAACTTGGGGAAAAAATCAATTTAATTCTTCATTTCCAGTTTCTTTATGTTGCTATATGTCAT
CAAAAGGCATACTTGCTAACTACTTGTCTATAGAAAATGCAGAGATAAAGTGCAGTTCTATCGATATAAAAGATGTTTTT
GAAATTGAACCTGAGAATGAAAATACATTTTTTGCATTTGAAACATCTCATTCAATTAAACTTACAGCATTACCGGATCA
TACAACTTGCGATCTAACTGATGCAGATTTTGGTAGTGAAATAGTCATTCGTCCAGATAGTATTGTTTATTTAGCTTGTA
GTCTTGCTGAGATTTTAAAGGAAAGTCTTGCTAATTGTATGGATATTCCGAATAACGTAGATCACTTAGATTGGTCAGAA
CCAAAACAAGTTATACCATTATTTCCTCATATACTATCAACATTAAACAACCTTTGCTCTAGAGCAGATACTATTCAGAC
TCCCTTTTTGTTACAGCCTGTGTGGAAAACTTTAGGTAAATCTCCTAGATTGGCTGATAACTGTCTAGATATTTTTATAT
GGAGCGATGTAGCATTTGTCAAATTTATTTTAGAAATATCGAATTTAAATGTAAATGTTTTATCAATTAATCGACAAACT
AGAACGGCTATTTGGCTATATAAAATGTTAGTTGATATAGTGAAGTATGGGCGTTTTAATCACCATAAAATTATTGATTT
GTGTTCTTATAATACAAAGAATGATAAAGCTTTTGCTTCCTCTGGAATGATCACAAATGTCTTTATGAAAAGTGAACGAT
TAGAACGTCCTATAATAATGAAGTCTGAAATAAAGAATATTATCTTAGGTGGAGGACAAGAATTACTTAGTCCAGAACGA
CGTTTTGATGCAATTATTTACAATTCTTCGGAGTTATTTAGATGA

Upstream 100 bases:

>100_bases
ATATTCAAAATTCTTTGGATTTTTTGACCGCACTTTTAGTTGATAGGCACAAGAGAGGACGCTTGTGCCATTATGGAGAA
ACTTCATATAAAGTTATACT

Downstream 100 bases:

>100_bases
AGTGTGTAGACTTATTTTCAGGATGTGGAGGTTTATCTCTTGGTTTTGAATTAGCTGGATTTGAGATCTGTGCAGCTTTT
GAAAATTGGGAGAAAGCTAT

Product: urease accessory protein

Products: NA

Alternate protein names: R.HindVP; Endonuclease HindVP; Type II restriction enzyme HindVP

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLYYVPRREKSYMNIKPHLFGLNRSNRDFSLRETWGKNQFNSSFPVSLCCYMSSKGILANYLSIENAEIKCSSIDIKDVF
EIEPENENTFFAFETSHSIKLTALPDHTTCDLTDADFGSEIVIRPDSIVYLACSLAEILKESLANCMDIPNNVDHLDWSE
PKQVIPLFPHILSTLNNLCSRADTIQTPFLLQPVWKTLGKSPRLADNCLDIFIWSDVAFVKFILEISNLNVNVLSINRQT
RTAIWLYKMLVDIVKYGRFNHHKIIDLCSYNTKNDKAFASSGMITNVFMKSERLERPIIMKSEIKNIILGGGQELLSPER
RFDAIIYNSSELFR

Sequences:

>Translated_334_residues
MLYYVPRREKSYMNIKPHLFGLNRSNRDFSLRETWGKNQFNSSFPVSLCCYMSSKGILANYLSIENAEIKCSSIDIKDVF
EIEPENENTFFAFETSHSIKLTALPDHTTCDLTDADFGSEIVIRPDSIVYLACSLAEILKESLANCMDIPNNVDHLDWSE
PKQVIPLFPHILSTLNNLCSRADTIQTPFLLQPVWKTLGKSPRLADNCLDIFIWSDVAFVKFILEISNLNVNVLSINRQT
RTAIWLYKMLVDIVKYGRFNHHKIIDLCSYNTKNDKAFASSGMITNVFMKSERLERPIIMKSEIKNIILGGGQELLSPER
RFDAIIYNSSELFR
>Mature_334_residues
MLYYVPRREKSYMNIKPHLFGLNRSNRDFSLRETWGKNQFNSSFPVSLCCYMSSKGILANYLSIENAEIKCSSIDIKDVF
EIEPENENTFFAFETSHSIKLTALPDHTTCDLTDADFGSEIVIRPDSIVYLACSLAEILKESLANCMDIPNNVDHLDWSE
PKQVIPLFPHILSTLNNLCSRADTIQTPFLLQPVWKTLGKSPRLADNCLDIFIWSDVAFVKFILEISNLNVNVLSINRQT
RTAIWLYKMLVDIVKYGRFNHHKIIDLCSYNTKNDKAFASSGMITNVFMKSERLERPIIMKSEIKNIILGGGQELLSPER
RFDAIIYNSSELFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): T2D5_HAEIN (P44999)

Other databases:

- EMBL:   L42023
- PIR:   B64109
- RefSeq:   NP_439199.1
- REBASE:   2819
- GeneID:   950604
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1040
- NMPDR:   fig|71421.1.peg.1001
- TIGR:   HI_1040
- HOGENOM:   HBG422324
- OMA:   TKNDKAF
- ProtClustDB:   CLSK2301760
- BioCyc:   HINF71421:HI_1040-MONOMER
- BRENDA:   3.1.21.4
- InterPro:   IPR019044

Pfam domain/function: PF09519 RE_HindVP

EC number: =3.1.21.4

Molecular weight: Translated: 38347; Mature: 38347

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYYVPRREKSYMNIKPHLFGLNRSNRDFSLRETWGKNQFNSSFPVSLCCYMSSKGILAN
CEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEH
YLSIENAEIKCSSIDIKDVFEIEPENENTFFAFETSHSIKLTALPDHTTCDLTDADFGSE
EEEECCCEEEEEECCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCCEECCCCCCCCCE
IVIRPDSIVYLACSLAEILKESLANCMDIPNNVDHLDWSEPKQVIPLFPHILSTLNNLCS
EEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RADTIQTPFLLQPVWKTLGKSPRLADNCLDIFIWSDVAFVKFILEISNLNVNVLSINRQT
HHHHCCCCHHHHHHHHHCCCCCCCHHHHEEEEEECHHHHHHHHHHHCCCEEEEEEECCCH
RTAIWLYKMLVDIVKYGRFNHHKIIDLCSYNTKNDKAFASSGMITNVFMKSERLERPIIM
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHCCCCCEE
KSEIKNIILGGGQELLSPERRFDAIIYNSSELFR
HHHHHHHEECCCHHHCCCHHHCEEEEECCHHHCC
>Mature Secondary Structure
MLYYVPRREKSYMNIKPHLFGLNRSNRDFSLRETWGKNQFNSSFPVSLCCYMSSKGILAN
CEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEH
YLSIENAEIKCSSIDIKDVFEIEPENENTFFAFETSHSIKLTALPDHTTCDLTDADFGSE
EEEECCCEEEEEECCCCCEEEECCCCCCEEEEEECCCCEEEEECCCCCEECCCCCCCCCE
IVIRPDSIVYLACSLAEILKESLANCMDIPNNVDHLDWSEPKQVIPLFPHILSTLNNLCS
EEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RADTIQTPFLLQPVWKTLGKSPRLADNCLDIFIWSDVAFVKFILEISNLNVNVLSINRQT
HHHHCCCCHHHHHHHHHCCCCCCCHHHHEEEEEECHHHHHHHHHHHCCCEEEEEEECCCH
RTAIWLYKMLVDIVKYGRFNHHKIIDLCSYNTKNDKAFASSGMITNVFMKSERLERPIIM
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHCCCCCEE
KSEIKNIILGGGQELLSPERRFDAIIYNSSELFR
HHHHHHHEECCCHHHCCCHHHCEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800