| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16272972
Identifier: 16272972
GI number: 16272972
Start: 1102856
End: 1104058
Strand: Direct
Name: 16272972
Synonym: HI1038
Alternate gene names: NA
Gene position: 1102856-1104058 (Clockwise)
Preceding gene: 30995418
Following gene: 16272973
Centisome position: 60.26
GC content: 37.49
Gene sequence:
>1203_bases ATGAGTAAAGCTATGATCTCTCGTGAAAATTATTTACAACAACTGATTCAATTTAAAGATACTGATTTTATCAAAGTCAT CTCGGGTGTTCGTCGTTCTGGTAAATCGGTGTTACTCATGCAATACCGTGATTATCTGCAGCAACAGGGCATTGCTTCCG AAAATATTCTTTACCTCAATTTTGAATCTTTTGAATATCAATGGGTGAAAGACGCTCAAGACTTCCAACAGCTTATTCAA GAAAAAATGCCGTCTTCTCAAGAGAAAATCTACTTTCTGATTGATGAAATTCAGTTTGTAGAAGGTTGGCAAAAAATCGT CAATGCGCTTCGCGTGAGTTTTAACACTGATATCGTGATTACAGGTTCCAATGCCAACTTGCTTTCCGGTGAGCTTGCGA CGCTGTTAAGCGGTCGGTATGTAGAAATCAAAATTTACCCGCTTTCTTTCAAAGAATTTTTGCACGCCAAAAATGTGGAT AGCCAATCAAGATTGGTCGATAAACTCTATTCGGAATATGAAAAATATGGCGGTTTCCCCAGTGTTGTGATGGCTGATGA GCCTTTAAAAGAAACGATTTTATCGGGTATTTTTGATTCCATCGTGCTAAATGATATTGCCCACCGAGCTGGAGTGAAAG ACACGCATATTCTTAAAAGTGTGATTCTCTTTTTAGCAGATAATGTCGGTCAGTTGGTGAATCCAAGCAAAATTAGCAAC ACGCTCACGTCCGAACGTGTCCCCACTTCAAACCATACCATCAGCAAATATCTTGATTTGTTAGAAAATGCGTTTCTTTT TTATAAAGCAAAACAATACGATATTCGCGGAAAAGGCTATTTAAAAACCAATGCCAAATATTTTATTGTGGATAACGGTT TAAGACGACATGCTATCGGCAAAAAAGGCGCGAATTATGCCAATCGACTAGAAAATATCGTTTTTATTGAATTACTCAGA CGGGGTTATAGCGTTGATGTGGGCAAACTCGACAGCAAAGAAATTGATTTTATCGCTCGAAAAGCCGATGAGATTTTATA TGTGCAAGTCGCCTTTGAAATACCTGAAAATACCCACGAAACAGATAATCTTTTGCATATTAAAGATAACTATAAAAAGA TCTTAATTACGGGCAAATATTACGAACAAACGGAGATTGATGGGATTGAAGTGATTTATGTGGTGGATTGGTTGCTGCAA TAA
Upstream 100 bases:
>100_bases TAAAAACTGGAAATGTAATTCCAAATACATCAAGAAACAAATAATATGGAAATCAACTTCCAATTTTCGTATACTTTTTA AAATATGAAATTAACTTCCA
Downstream 100 bases:
>100_bases ATCCAAAAACGTTGGAAATTTTAACCGCACTTTTTGTGATTAATGTTTGTGGAGGCACGTGTTTTCTAACGCGCACCAAA GAAAGTAAATAAAGTGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSKAMISRENYLQQLIQFKDTDFIKVISGVRRSGKSVLLMQYRDYLQQQGIASENILYLNFESFEYQWVKDAQDFQQLIQ EKMPSSQEKIYFLIDEIQFVEGWQKIVNALRVSFNTDIVITGSNANLLSGELATLLSGRYVEIKIYPLSFKEFLHAKNVD SQSRLVDKLYSEYEKYGGFPSVVMADEPLKETILSGIFDSIVLNDIAHRAGVKDTHILKSVILFLADNVGQLVNPSKISN TLTSERVPTSNHTISKYLDLLENAFLFYKAKQYDIRGKGYLKTNAKYFIVDNGLRRHAIGKKGANYANRLENIVFIELLR RGYSVDVGKLDSKEIDFIARKADEILYVQVAFEIPENTHETDNLLHIKDNYKKILITGKYYEQTEIDGIEVIYVVDWLLQ
Sequences:
>Translated_400_residues MSKAMISRENYLQQLIQFKDTDFIKVISGVRRSGKSVLLMQYRDYLQQQGIASENILYLNFESFEYQWVKDAQDFQQLIQ EKMPSSQEKIYFLIDEIQFVEGWQKIVNALRVSFNTDIVITGSNANLLSGELATLLSGRYVEIKIYPLSFKEFLHAKNVD SQSRLVDKLYSEYEKYGGFPSVVMADEPLKETILSGIFDSIVLNDIAHRAGVKDTHILKSVILFLADNVGQLVNPSKISN TLTSERVPTSNHTISKYLDLLENAFLFYKAKQYDIRGKGYLKTNAKYFIVDNGLRRHAIGKKGANYANRLENIVFIELLR RGYSVDVGKLDSKEIDFIARKADEILYVQVAFEIPENTHETDNLLHIKDNYKKILITGKYYEQTEIDGIEVIYVVDWLLQ >Mature_399_residues SKAMISRENYLQQLIQFKDTDFIKVISGVRRSGKSVLLMQYRDYLQQQGIASENILYLNFESFEYQWVKDAQDFQQLIQE KMPSSQEKIYFLIDEIQFVEGWQKIVNALRVSFNTDIVITGSNANLLSGELATLLSGRYVEIKIYPLSFKEFLHAKNVDS QSRLVDKLYSEYEKYGGFPSVVMADEPLKETILSGIFDSIVLNDIAHRAGVKDTHILKSVILFLADNVGQLVNPSKISNT LTSERVPTSNHTISKYLDLLENAFLFYKAKQYDIRGKGYLKTNAKYFIVDNGLRRHAIGKKGANYANRLENIVFIELLRR GYSVDVGKLDSKEIDFIARKADEILYVQVAFEIPENTHETDNLLHIKDNYKKILITGKYYEQTEIDGIEVIYVVDWLLQ
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1038_HAEIN (P44099)
Other databases:
- EMBL: L42023 - PIR: I64018 - RefSeq: NP_439198.1 - GeneID: 950021 - GenomeReviews: L42023_GR - KEGG: hin:HI1038 - NMPDR: fig|71421.1.peg.1000 - TIGR: HI_1038 - HOGENOM: HBG566369 - OMA: VIFPLKK - ProtClustDB: CLSK808477 - BioCyc: HINF71421:HI_1038-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46103; Mature: 45972
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAMISRENYLQQLIQFKDTDFIKVISGVRRSGKSVLLMQYRDYLQQQGIASENILYLN CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEE FESFEYQWVKDAQDFQQLIQEKMPSSQEKIYFLIDEIQFVEGWQKIVNALRVSFNTDIVI ECCCCCHHHHCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEE TGSNANLLSGELATLLSGRYVEIKIYPLSFKEFLHAKNVDSQSRLVDKLYSEYEKYGGFP ECCCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC SVVMADEPLKETILSGIFDSIVLNDIAHRAGVKDTHILKSVILFLADNVGQLVNPSKISN CEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHCCCHHHHH TLTSERVPTSNHTISKYLDLLENAFLFYKAKQYDIRGKGYLKTNAKYFIVDNGLRRHAIG HHHHCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCEEEECCEEEEEECCCHHHHCC KKGANYANRLENIVFIELLRRGYSVDVGKLDSKEIDFIARKADEILYVQVAFEIPENTHE CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCC TDNLLHIKDNYKKILITGKYYEQTEIDGIEVIYVVDWLLQ CCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEHHHHHC >Mature Secondary Structure SKAMISRENYLQQLIQFKDTDFIKVISGVRRSGKSVLLMQYRDYLQQQGIASENILYLN CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEE FESFEYQWVKDAQDFQQLIQEKMPSSQEKIYFLIDEIQFVEGWQKIVNALRVSFNTDIVI ECCCCCHHHHCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEE TGSNANLLSGELATLLSGRYVEIKIYPLSFKEFLHAKNVDSQSRLVDKLYSEYEKYGGFP ECCCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC SVVMADEPLKETILSGIFDSIVLNDIAHRAGVKDTHILKSVILFLADNVGQLVNPSKISN CEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHCCCHHHHH TLTSERVPTSNHTISKYLDLLENAFLFYKAKQYDIRGKGYLKTNAKYFIVDNGLRRHAIG HHHHCCCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCEEEECCEEEEEECCCHHHHCC KKGANYANRLENIVFIELLRRGYSVDVGKLDSKEIDFIARKADEILYVQVAFEIPENTHE CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECCCCCCC TDNLLHIKDNYKKILITGKYYEQTEIDGIEVIYVVDWLLQ CCCEEEEECCCEEEEEECCCCCCCCCCCEEEEEEHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800