Click here to switch to the map view.

The map label for this gene is yfbB [C]

Identifier: 16272238

GI number: 16272238

Start: 315850

End: 316593

Strand: Reverse

Name: yfbB [C]

Synonym: HI0282

Alternate gene names: 16272238

Gene position: 316593-315850 (Counterclockwise)

Preceding gene: 16272239

Following gene: 16272237

Centisome position: 17.3

GC content: 36.16

Gene sequence:

>744_bases
ATGATAAACATCATTTTTCTTCACGGACTTCTTGGTACAAAAAATGACTGGCAAAAAGTCATTGAAAATCTACCGCACTT
TAATTGTATTGCGCTAGATTTGCCTTTTCACGGGCAAGCTAAAGACCTTGAAGTCACAAATTTTGAAGATTCGGCGGAGT
ATTTGGCTCAGCAAATTAAAAGTGCGGTGAAAAATGGACCCTATTTTCTTGTTGGGTATTCTCTAGGTGGCAGGATTGCT
TTGTATTATGCGCTGCAAGCTCAGCTGGAACGATCTAATTTGCAAGGCGTTATTTTAGAAGGTGCGAATCTAGGTTTAAA
AACTGACGAAGAAAAGCAGGCTCGTTTTCAGCAGGATTTTGCTTGGGCGCAACGTTTTATGCAAGAATCGCCAGAAAAAG
TGTTGAATGATTGGTATCAACAACCTGTGTTTTCTCATTTGACTACAGAAGAAAGATTACAGTTGGTTGAAAAACGAAAA
TCAAATTGTGGGAAAAATATTGGCAAAATGTTGCTGGCGACAAGTCTATCCAAACAACCTGATTTTAGTGAAAAAGTGCG
GTTAAGTTCTTTGCCATTTTTTTATTTTTGTGGCGAAAGAGATCATAAGTTCCAAGTATTAGCCAAAGAAAATCAAATTG
ATTTAGTGACAATTCCCTGCGCTGGACATAACTCACATTTAGAAAATTCAAAATATTTCTCTAAAAAAATAGAAAATTGC
ATATTAAAAATTGTTAGACCTTAG

Upstream 100 bases:

>100_bases
CTTAATCGAGCAAATTAGTCACGCCGTGATTGGTGCTTAAGTATTCTGTAGGCGGGCTTTAGTCCGCCATATTTTATTAT
TTCTATCAATAATCCCTTCA

Downstream 100 bases:

>100_bases
TTAAAATGCTAGGATTCAATCCTTTCTCTTTATAATAAACTTCTAAGGAAACACAATGTCTACACAACTTCGTAATAATC
CGATGAAAGTGGCGTTAGCC

Product: acyl-CoA thioester hydrolase YfbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MINIIFLHGLLGTKNDWQKVIENLPHFNCIALDLPFHGQAKDLEVTNFEDSAEYLAQQIKSAVKNGPYFLVGYSLGGRIA
LYYALQAQLERSNLQGVILEGANLGLKTDEEKQARFQQDFAWAQRFMQESPEKVLNDWYQQPVFSHLTTEERLQLVEKRK
SNCGKNIGKMLLATSLSKQPDFSEKVRLSSLPFFYFCGERDHKFQVLAKENQIDLVTIPCAGHNSHLENSKYFSKKIENC
ILKIVRP

Sequences:

>Translated_247_residues
MINIIFLHGLLGTKNDWQKVIENLPHFNCIALDLPFHGQAKDLEVTNFEDSAEYLAQQIKSAVKNGPYFLVGYSLGGRIA
LYYALQAQLERSNLQGVILEGANLGLKTDEEKQARFQQDFAWAQRFMQESPEKVLNDWYQQPVFSHLTTEERLQLVEKRK
SNCGKNIGKMLLATSLSKQPDFSEKVRLSSLPFFYFCGERDHKFQVLAKENQIDLVTIPCAGHNSHLENSKYFSKKIENC
ILKIVRP
>Mature_247_residues
MINIIFLHGLLGTKNDWQKVIENLPHFNCIALDLPFHGQAKDLEVTNFEDSAEYLAQQIKSAVKNGPYFLVGYSLGGRIA
LYYALQAQLERSNLQGVILEGANLGLKTDEEKQARFQQDFAWAQRFMQESPEKVLNDWYQQPVFSHLTTEERLQLVEKRK
SNCGKNIGKMLLATSLSKQPDFSEKVRLSSLPFFYFCGERDHKFQVLAKENQIDLVTIPCAGHNSHLENSKYFSKKIENC
ILKIVRP

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily

Homologues:

Organism=Escherichia coli, GI1788598, Length=226, Percent_Identity=41.5929203539823, Blast_Score=183, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y282_HAEIN (P44611)

Other databases:

- EMBL:   L42023
- PIR:   B64147
- RefSeq:   NP_438450.1
- ProteinModelPortal:   P44611
- SMR:   P44611
- GeneID:   949409
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0282
- NMPDR:   fig|71421.1.peg.265
- TIGR:   HI_0282
- HOGENOM:   HBG748003
- OMA:   ESCHPGL
- ProtClustDB:   PRK11126
- BioCyc:   HINF71421:HI_0282-MONOMER
- InterPro:   IPR000073
- InterPro:   IPR022485
- TIGRFAMs:   TIGR03695

Pfam domain/function: PF00561 Abhydrolase_1

EC number: NA

Molecular weight: Translated: 28343; Mature: 28343

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIIFLHGLLGTKNDWQKVIENLPHFNCIALDLPFHGQAKDLEVTNFEDSAEYLAQQIK
CEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHH
SAVKNGPYFLVGYSLGGRIALYYALQAQLERSNLQGVILEGANLGLKTDEEKQARFQQDF
HHHCCCCEEEEEECCCCEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH
AWAQRFMQESPEKVLNDWYQQPVFSHLTTEERLQLVEKRKSNCGKNIGKMLLATSLSKQP
HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DFSEKVRLSSLPFFYFCGERDHKFQVLAKENQIDLVTIPCAGHNSHLENSKYFSKKIENC
CHHHHHHHCCCCEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
ILKIVRP
HHHHCCC
>Mature Secondary Structure
MINIIFLHGLLGTKNDWQKVIENLPHFNCIALDLPFHGQAKDLEVTNFEDSAEYLAQQIK
CEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHH
SAVKNGPYFLVGYSLGGRIALYYALQAQLERSNLQGVILEGANLGLKTDEEKQARFQQDF
HHHCCCCEEEEEECCCCEEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH
AWAQRFMQESPEKVLNDWYQQPVFSHLTTEERLQLVEKRKSNCGKNIGKMLLATSLSKQP
HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DFSEKVRLSSLPFFYFCGERDHKFQVLAKENQIDLVTIPCAGHNSHLENSKYFSKKIENC
CHHHHHHHCCCCEEEEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHH
ILKIVRP
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800