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The map label for this gene is ytfH [C]

Identifier: 162448205

GI number: 162448205

Start: 1430936

End: 1431238

Strand: Direct

Name: ytfH [C]

Synonym: ACL_1369

Alternate gene names: 162448205

Gene position: 1430936-1431238 (Clockwise)

Preceding gene: 162448170

Following gene: 162448206

Centisome position: 95.59

GC content: 31.35

Gene sequence:

>303_bases
ATGCAAAGTTGTTCAGTAGAACGTGCAGTCAACTTATTTGGAGATAAATGGAAGTTTTTAATTATACGTGATCTTATGGA
TGGTAAGATGCGTTTTTCAGAACTTAAAAACTCTATAGGAAATATCTCTCAAAAAGTATTAACTCAAAATTTAAGAGCTC
TTGAAAGTAATGGATTACTTACAAGAACTGTTTACCCAGTTGTACCACCCAAAGTAGAATATGAATTAACTGAATTAGGT
TATAGTTTAAAACTTGTGATAGACGCACTTAGAAAATGGGGAGAATTATATGCAAAAGCTTGA

Upstream 100 bases:

>100_bases
CACATATTCATTTAGATTACTATGTATTGATAAATGTGCGTGATATAATCAAGGTGTCAAAAAGATACTATCTTACTAAT
GTAAACTATGGAGGTGTCAT

Downstream 100 bases:

>100_bases
TAGAGCTATTTTAGTTGCACTTAATTATCAAGGTAATTATGAATCATGTAAGCTGTCACTTGATGAATTAGAAGAGTTAG
CAAAAGCTGTTCAAATTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MQSCSVERAVNLFGDKWKFLIIRDLMDGKMRFSELKNSIGNISQKVLTQNLRALESNGLLTRTVYPVVPPKVEYELTELG
YSLKLVIDALRKWGELYAKA

Sequences:

>Translated_100_residues
MQSCSVERAVNLFGDKWKFLIIRDLMDGKMRFSELKNSIGNISQKVLTQNLRALESNGLLTRTVYPVVPPKVEYELTELG
YSLKLVIDALRKWGELYAKA
>Mature_100_residues
MQSCSVERAVNLFGDKWKFLIIRDLMDGKMRFSELKNSIGNISQKVLTQNLRALESNGLLTRTVYPVVPPKVEYELTELG
YSLKLVIDALRKWGELYAKA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=95, Percent_Identity=43.1578947368421, Blast_Score=86, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 11451; Mature: 11451

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSCSVERAVNLFGDKWKFLIIRDLMDGKMRFSELKNSIGNISQKVLTQNLRALESNGLL
CCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
TRTVYPVVPPKVEYELTELGYSLKLVIDALRKWGELYAKA
EEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQSCSVERAVNLFGDKWKFLIIRDLMDGKMRFSELKNSIGNISQKVLTQNLRALESNGLL
CCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
TRTVYPVVPPKVEYELTELGYSLKLVIDALRKWGELYAKA
EEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]