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The map label for this gene is recN [H]

Identifier: 162148969

GI number: 162148969

Start: 3290224

End: 3291939

Strand: Direct

Name: recN [H]

Synonym: GDI_3199

Alternate gene names: 162148969

Gene position: 3290224-3291939 (Clockwise)

Preceding gene: 162148968

Following gene: 162148970

Centisome position: 83.42

GC content: 73.66

Gene sequence:

>1716_bases
GTGCTGACTCATCTCTCGATCCGCGACGTGGTCCTGATCGAACGGCTGGACCTGCCGTTTTCGCCCGGCCTGACGGTGCT
GACGGGGGAAACCGGGGCGGGCAAATCCATCCTGCTGGACAGTTTGGGCCTGACATTGGGCGAGCGCGCCAGCGCGGGGC
TGGTCCGCGCCGGGGCCGAGCAGGCCAGCGTCACCGCCTGCTTCGAACTCGCCCCCGGCCATCCGCTGCCCGGCCTGCTG
GCCGAACAGGGTATCCTGATCGACGACCCGCGCGACCCGCTGGTGCTGCGCCGGATCGTGACGGTGGATGGACGGTCCCG
CGCCTATATCAACGACCAGCCGGCCGGCGTGACCCTGCTGCGCCGCGCGGCGTCGCTGCTGGTCGAAATCCAGGGGCAGC
ACGAACAGATGGGGCTGGCGGACCAGTCCACGCATCTGGACCTGCTGGATGCCTTCGGCGTGCCGGCCGACCTGCGGGCC
GATACCGCCGCCGCCTATCGCGCATGGATGGAGGCCACGGCCGAACTGGCCGCCGCCCAGGCCGCGATGGAAAACGCGGC
GCGCGAGGAAGACTGGCTGCGCCAGTCGGTCGAGGATCTGTCCAGCCTGGCCCCGCAGGAGGACGAGGAAACGCATCTGG
CCGGCCTGCGCCAGTCGCTGCAACAGGGCGAACGGCGTGGCGAGGCCATTGCGGCTGGCGCTGGCCGAACTGTCGCCTGC
GCGACCGCCGCGCCACCTGGCCCCGCCGCCGCCCTGCGCGGCGCCAGCCGGACCCTGCAGCGCCTGCTGCCCGCCGCCGG
CGAGGACGATGCGGCGGCCGGCGGCGCCGACCGGCTGGCCCATGACGCGCTGGCGGCCCTGGAACGCGCCGAGGAAGCCC
TGGGCGAGGCCGAAACCCTGCTCTCGCGCCTGGCCGCCGACGCGGAATCCGACCCCCACCTGCTGGAACAGACCGAGGAA
CGGCTGTTCGCCCTGCGCGCCGCCGCGCGCAAGCATGGCGTGTCGGTGCCCGAACTGCCGGGCCTGCTGGCGGCCTTCGC
CGACCGGCTGGCGGCGCTGGATTCCGGCAACGCCCGGATCGGCGCCCTGCAGGAGGCGGTCCGCACCCGGCGCGCACGCT
TCGAGGACACGGCGGGCCGGCTGTCCGCCGCGCGTGAGACGACGGCGCGGCGCCTGGAACAGGCAGTGACCGCCGAACTG
CGCCCGCTGCGGCTGGAACGCGCCCGCTTCTTCGTCTCGCTGCCCCCGTTGCCGCCCGAAGCGTGGACCGCGCGCGGGCG
CGAACAGGCGGCGTTCCAGATCGCCGCCAATCCCGGCCAGCCCCCCGGCCCGCTGGCCAAGGTCGCATCGGGCGGCGAGC
TGTCGCGCCTGATGCTGGCGCTGAAGGTCGTGCTGGCCGGCCGGTCCGCCGTACCGACCCTGGTGTTCGACGAGGTCGAT
TCGGGCGTGGGGGGCGCCACCGCCTCGGCCATCGGGGACCGGCTGGCCCGCGTCGGGCATGACGTGCAGGTGCTGGTCGT
CACCCACAGCCCGCAGGTCGCGGCCCGGGGCGACGCGCACCTGCGCATCAGCAAATCGGTGACCAAGGGCCGAACCGAAA
CCCGGGCCGAGCCGTTGTCGGCGGCACAGCGGCGCGAGGAAATTGCCCGGATGCTGGCCGGCGACACGATCACCGAGGCC
GCGCGGGCGGCGGCGGACAGTCTTCTGCAAGGTTAA

Upstream 100 bases:

>100_bases
CCGAGCACCGGAGCGGAGCGGCCTTGTGGGCCGTGAGCACCGGAGCACAGGAAAGGCGCCTCGGATCGCCGCCAGCGCGC
GTTTACGGGCGGACGACGTT

Downstream 100 bases:

>100_bases
TATCGCCATGTCCCGCGCACACGATCCCGCCCCCGATCTCGCCAGGCTGGACCCGTCCGAACTGACCGAACCCCAGGCCA
TGGTGGAACTGGAGCGTCTG

Product: DNA repair protein recN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 571; Mature: 571

Protein sequence:

>571_residues
MLTHLSIRDVVLIERLDLPFSPGLTVLTGETGAGKSILLDSLGLTLGERASAGLVRAGAEQASVTACFELAPGHPLPGLL
AEQGILIDDPRDPLVLRRIVTVDGRSRAYINDQPAGVTLLRRAASLLVEIQGQHEQMGLADQSTHLDLLDAFGVPADLRA
DTAAAYRAWMEATAELAAAQAAMENAAREEDWLRQSVEDLSSLAPQEDEETHLAGLRQSLQQGERRGEAIAAGAGRTVAC
ATAAPPGPAAALRGASRTLQRLLPAAGEDDAAAGGADRLAHDALAALERAEEALGEAETLLSRLAADAESDPHLLEQTEE
RLFALRAAARKHGVSVPELPGLLAAFADRLAALDSGNARIGALQEAVRTRRARFEDTAGRLSAARETTARRLEQAVTAEL
RPLRLERARFFVSLPPLPPEAWTARGREQAAFQIAANPGQPPGPLAKVASGGELSRLMLALKVVLAGRSAVPTLVFDEVD
SGVGGATASAIGDRLARVGHDVQVLVVTHSPQVAARGDAHLRISKSVTKGRTETRAEPLSAAQRREEIARMLAGDTITEA
ARAAADSLLQG

Sequences:

>Translated_571_residues
MLTHLSIRDVVLIERLDLPFSPGLTVLTGETGAGKSILLDSLGLTLGERASAGLVRAGAEQASVTACFELAPGHPLPGLL
AEQGILIDDPRDPLVLRRIVTVDGRSRAYINDQPAGVTLLRRAASLLVEIQGQHEQMGLADQSTHLDLLDAFGVPADLRA
DTAAAYRAWMEATAELAAAQAAMENAAREEDWLRQSVEDLSSLAPQEDEETHLAGLRQSLQQGERRGEAIAAGAGRTVAC
ATAAPPGPAAALRGASRTLQRLLPAAGEDDAAAGGADRLAHDALAALERAEEALGEAETLLSRLAADAESDPHLLEQTEE
RLFALRAAARKHGVSVPELPGLLAAFADRLAALDSGNARIGALQEAVRTRRARFEDTAGRLSAARETTARRLEQAVTAEL
RPLRLERARFFVSLPPLPPEAWTARGREQAAFQIAANPGQPPGPLAKVASGGELSRLMLALKVVLAGRSAVPTLVFDEVD
SGVGGATASAIGDRLARVGHDVQVLVVTHSPQVAARGDAHLRISKSVTKGRTETRAEPLSAAQRREEIARMLAGDTITEA
ARAAADSLLQG
>Mature_571_residues
MLTHLSIRDVVLIERLDLPFSPGLTVLTGETGAGKSILLDSLGLTLGERASAGLVRAGAEQASVTACFELAPGHPLPGLL
AEQGILIDDPRDPLVLRRIVTVDGRSRAYINDQPAGVTLLRRAASLLVEIQGQHEQMGLADQSTHLDLLDAFGVPADLRA
DTAAAYRAWMEATAELAAAQAAMENAAREEDWLRQSVEDLSSLAPQEDEETHLAGLRQSLQQGERRGEAIAAGAGRTVAC
ATAAPPGPAAALRGASRTLQRLLPAAGEDDAAAGGADRLAHDALAALERAEEALGEAETLLSRLAADAESDPHLLEQTEE
RLFALRAAARKHGVSVPELPGLLAAFADRLAALDSGNARIGALQEAVRTRRARFEDTAGRLSAARETTARRLEQAVTAEL
RPLRLERARFFVSLPPLPPEAWTARGREQAAFQIAANPGQPPGPLAKVASGGELSRLMLALKVVLAGRSAVPTLVFDEVD
SGVGGATASAIGDRLARVGHDVQVLVVTHSPQVAARGDAHLRISKSVTKGRTETRAEPLSAAQRREEIARMLAGDTITEA
ARAAADSLLQG

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=570, Percent_Identity=33.6842105263158, Blast_Score=265, Evalue=6e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60035; Mature: 60035

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHLSIRDVVLIERLDLPFSPGLTVLTGETGAGKSILLDSLGLTLGERASAGLVRAGAE
CCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCC
QASVTACFELAPGHPLPGLLAEQGILIDDPRDPLVLRRIVTVDGRSRAYINDQPAGVTLL
HHHHHHHEEECCCCCCCCHHHHCCEEEECCCCHHHHHHHHEECCCCCEEECCCCCHHHHH
RRAASLLVEIQGQHEQMGLADQSTHLDLLDAFGVPADLRADTAAAYRAWMEATAELAAAQ
HHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAMENAAREEDWLRQSVEDLSSLAPQEDEETHLAGLRQSLQQGERRGEAIAAGAGRTVAC
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCEEEE
ATAAPPGPAAALRGASRTLQRLLPAAGEDDAAAGGADRLAHDALAALERAEEALGEAETL
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSRLAADAESDPHLLEQTEERLFALRAAARKHGVSVPELPGLLAAFADRLAALDSGNARI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
GALQEAVRTRRARFEDTAGRLSAARETTARRLEQAVTAELRPLRLERARFFVSLPPLPPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCH
AWTARGREQAAFQIAANPGQPPGPLAKVASGGELSRLMLALKVVLAGRSAVPTLVFDEVD
HHHCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHC
SGVGGATASAIGDRLARVGHDVQVLVVTHSPQVAARGDAHLRISKSVTKGRTETRAEPLS
CCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEEEECHHHCCCHHHHHHHHH
AAQRREEIARMLAGDTITEAARAAADSLLQG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTHLSIRDVVLIERLDLPFSPGLTVLTGETGAGKSILLDSLGLTLGERASAGLVRAGAE
CCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCHHHCCCC
QASVTACFELAPGHPLPGLLAEQGILIDDPRDPLVLRRIVTVDGRSRAYINDQPAGVTLL
HHHHHHHEEECCCCCCCCHHHHCCEEEECCCCHHHHHHHHEECCCCCEEECCCCCHHHHH
RRAASLLVEIQGQHEQMGLADQSTHLDLLDAFGVPADLRADTAAAYRAWMEATAELAAAQ
HHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AAMENAAREEDWLRQSVEDLSSLAPQEDEETHLAGLRQSLQQGERRGEAIAAGAGRTVAC
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCEEEE
ATAAPPGPAAALRGASRTLQRLLPAAGEDDAAAGGADRLAHDALAALERAEEALGEAETL
ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LSRLAADAESDPHLLEQTEERLFALRAAARKHGVSVPELPGLLAAFADRLAALDSGNARI
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHH
GALQEAVRTRRARFEDTAGRLSAARETTARRLEQAVTAELRPLRLERARFFVSLPPLPPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCH
AWTARGREQAAFQIAANPGQPPGPLAKVASGGELSRLMLALKVVLAGRSAVPTLVFDEVD
HHHCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHC
SGVGGATASAIGDRLARVGHDVQVLVVTHSPQVAARGDAHLRISKSVTKGRTETRAEPLS
CCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCCEEEEECHHHCCCHHHHHHHHH
AAQRREEIARMLAGDTITEAARAAADSLLQG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA