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The map label for this gene is yfiO [C]

Identifier: 162148968

GI number: 162148968

Start: 3289007

End: 3289966

Strand: Direct

Name: yfiO [C]

Synonym: GDI_3198

Alternate gene names: 162148968

Gene position: 3289007-3289966 (Clockwise)

Preceding gene: 162148967

Following gene: 162148969

Centisome position: 83.39

GC content: 64.06

Gene sequence:

>960_bases
ATGTCCCTGCGCAGAATTCGATATCATTTCGCTGACCGTTCGAACGGCCTCCGTGCCGCCCGATTCGCATCACTGGCCCT
GATCCTGGCGGTGGCGGCCTGCGGCGGCGACAAGAAGGCGATCAACGACATGGAATCCCATGTCCCGCCTGTCGAAACGC
TCTACAATAACGGCATCGACGCCCTGCGCGACCAGCGCTATGCCCTGGCCGCCGCGGAATTCGAGGTCCTGCAGCAGAAT
TATCCCTATTCCGGCTATGTCGCGAACGCACAGCTCATGGAAGGCTACGCGAACTACCTGCAGGACAAATACGCCGACGC
GGTGCAGCAGTTGGACCGCTTCCTGGAACTGCACCCGACCAGCGCCGACGCGGCCTATGCCTTCTACCTGCGGGCCCTGT
GCTATTACGAGCAGGTGGCCGAGGTGCAGCGCGACCAGCAGGGCACGGTCGAGGCCATGAACGCGCTGGAAGAGGTGATC
ACCCGCTTCCCGCAATCGCCCTATGCCCGCGATGCGCAATTGAAGGTCGATCTGTGCCGCGACCATCTGGCCGGCAAGGA
AATGCTGGTCGGCCGGTTCTACGAGGAACAGCGGAATTACGAAGGCGCGGTCAACCGCTACCAGCGCGTGGTGCAGGATT
TCCAGACCACCAACCACGTGCCCGAGGCGCTGGAGCGTCTGGTCGAGGTGTATCTGGATCTGGGCCTGACGGACCAGGCG
CGCCGCACGGCCTCGGTGCTGTCCTATAACTATCCGGGCAGCAAATGGTACCGCTTCAGCTACAACATGCTGCGCAGCAA
GAACCTGCTGGACCCCCACGCCCCGCTGCCCGGCTCGGTCCCCGACACCACGCCGGCCACGCCCGTTGACGACACGCACG
CGAAAAATGCCCCGCCGCCGCCCGGCGCCACGCCGGCCAGACGCGGCTTCTTCTCGCGCATGTGGCACTCGGTCTTCTAA

Upstream 100 bases:

>100_bases
CTACCGGGCCGTATCACCCCGGATTGCATTGAAAACGACGCCATGGCCTTCACCACGGCCCGCCGCATGATATAAGGCAG
ACCGAACTGGAAGAGCCGGC

Downstream 100 bases:

>100_bases
GCGCCTGTCCGGAAGCATAGGCCGGTGAACAAGAACGGAACTCAGGAAACGCGCCTCGGATTGCCGCCGGCGCGCGTTTA
CGGTGTTCCAGGCGTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSLRRIRYHFADRSNGLRAARFASLALILAVAACGGDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEVLQQN
YPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYYEQVAEVQRDQQGTVEAMNALEEVI
TRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEEQRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQA
RRTASVLSYNYPGSKWYRFSYNMLRSKNLLDPHAPLPGSVPDTTPATPVDDTHAKNAPPPPGATPARRGFFSRMWHSVF

Sequences:

>Translated_319_residues
MSLRRIRYHFADRSNGLRAARFASLALILAVAACGGDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEVLQQN
YPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYYEQVAEVQRDQQGTVEAMNALEEVI
TRFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEEQRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQA
RRTASVLSYNYPGSKWYRFSYNMLRSKNLLDPHAPLPGSVPDTTPATPVDDTHAKNAPPPPGATPARRGFFSRMWHSVF
>Mature_318_residues
SLRRIRYHFADRSNGLRAARFASLALILAVAACGGDKKAINDMESHVPPVETLYNNGIDALRDQRYALAAAEFEVLQQNY
PYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPTSADAAYAFYLRALCYYEQVAEVQRDQQGTVEAMNALEEVIT
RFPQSPYARDAQLKVDLCRDHLAGKEMLVGRFYEEQRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQAR
RTASVLSYNYPGSKWYRFSYNMLRSKNLLDPHAPLPGSVPDTTPATPVDDTHAKNAPPPPGATPARRGFFSRMWHSVF

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=238, Percent_Identity=27.7310924369748, Blast_Score=88, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36221; Mature: 36090

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRRIRYHFADRSNGLRAARFASLALILAVAACGGDKKAINDMESHVPPVETLYNNGID
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCHH
ALRDQRYALAAAEFEVLQQNYPYSGYVANAQLMEGYANYLQDKYADAVQQLDRFLELHPT
HHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SADAAYAFYLRALCYYEQVAEVQRDQQGTVEAMNALEEVITRFPQSPYARDAQLKVDLCR
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
DHLAGKEMLVGRFYEEQRNYEGAVNRYQRVVQDFQTTNHVPEALERLVEVYLDLGLTDQA
HHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHH
RRTASVLSYNYPGSKWYRFSYNMLRSKNLLDPHAPLPGSVPDTTPATPVDDTHAKNAPPP
HHHHHHHHCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGATPARRGFFSRMWHSVF
CCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLRRIRYHFADRSNGLRAARFASLALILAVAACGGDKKAINDMESHVPPVETLYNNGID
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCHH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CCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]