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The map label for this gene is sufB [C]

Identifier: 162148830

GI number: 162148830

Start: 3152313

End: 3153803

Strand: Reverse

Name: sufB [C]

Synonym: GDI_3059

Alternate gene names: 162148830

Gene position: 3153803-3152313 (Counterclockwise)

Preceding gene: 162148831

Following gene: 162148829

Centisome position: 79.96

GC content: 64.65

Gene sequence:

>1491_bases
ATGCCAGCGGTTGCCGAAACCCGCGATACGGTCGAAGGCCTGGGTCAATCCACCTATAAATGGGGGTTCGAGACCGAGAT
CGAGATGGATCTGGCCCCCAAGGGCCTGACCGAGGACACGATCCGCCTGATCTCGCACCGCAAGCAGGAGCCCGAGTGGC
TGCTGGAATGGCGGCTGAAGGCGTTCCAGGCCTGGCAGGCGATGCCCGAGCCGACCTGGGCGAAGGTCAGCCATCCGCCG
ATCGATTTCCAGGACGCGCATTACTATGCCGCGCCGAAGAAGAAGACCGGCCCGAAATCGCTGGACGAGGTCGATCCCGA
ACTGCTGCGCACCTACGAGAAGCTGGGCATCCCGCTGCACGAGCAGGCGCTGCTGGCCGGCGTCGAGGTGCCCGAGGGGC
AGGAGGCACGCGCCCCCGTCGCCGTCGATGCCGTGTTCGACAGCGTCTCGGTCGTCACCACGTTCCGCGAGACCCTCGCC
AAGGCCGGCGTCATCTTCTGCCCGATCTCCGAGGCGGTGCGCGAGCATCCCGACCTGGTGCGCCGCTACCTGGGCAGCGT
GGTGCCGGTGGCCGACAATTTCTATGCCGCGCTGAATTCCGCCGTCTTCACCGACGGATCGTTCGTCTACGTGCCCAGGG
GCGTGCGCTGCCCGATGGAACTGTCGACCTATTTCCGCATCAATGCGCGCAATACCGGCCAGTTCGAACGCACGCTGATC
GTGGTCGAGGACGGGGCCTCGGTCTCGTACCTGGAAGGCTGCACCGCGCCGATGCGCGACGAGAACCAGCTGCACGCGGC
GGTGGTCGAACTGGTGGCGATGGACGATGCGTCGATCAAGTATTCGACCGTCCAGAACTGGTATCCGGGCGACGAGAACG
GGCGGGGCGGCATCTATAACTTCGTCACCAAGCGCGGCGCCTGCCGGGGCGCGCGGTCCAAGATTTCCTGGACCCAGGTC
GAAACCGGCTCGGCCATCACCTGGAAATATCCGTCGTGCATCCTGCAGGGCGACGGCGCGGTGGGCGAGTTCTACTCGGT
CGCGGTGACCAACAACCACCAGCAGGCCGATACCGGGACCAAGATGATCCATATCGGACGGAACACCCGTTCGACGATCA
TCGCCAAGACCATCAGCGCCGGCCATTCCGACAGCACCTATCGCGGCCTGGTGCGGATGATGCCCAAGGCGTCGGGGGGG
CGGAATTTCACCCAGTGCGACAGCCTGCTGATCGGCGACCAATGCGGGGCGCACACCGTGCCCTACATCGAAAGCCGCAA
CATGTCGGCGAAGATCGAGCACGAGGCGACGACCTCCAAGATCTCGGAAGACCAGCTGTTCTATTGCCGCCAGCGCGGCC
TGTCCGAGGAGGACGCGGTGGGGCTGATCGTCAACGGGTTCTGCAAGGACGTGCTGAAGGAACTGCCGATGGAATTCGCG
GTCGAGGCCCAGAAATTGCTGCAGATCAGCCTGGAAGGCAGCGTCGGCTGA

Upstream 100 bases:

>100_bases
GTGTCCAGGGCCCATGCGTCGAAGGGCAGGGGGGCCGTCACGGGCTCCAGGATACATCCGGCGCCGGCCCGGCCGTCGCG
GTCTGAGGGAGAGGAAAGAG

Downstream 100 bases:

>100_bases
ACGGAGATGAGTGACGTGAGCAACGAGTTTGTACGGATCGCCGGCCTGTGCGCCAGAATTTCGGATGGCGGAGTGGAGAA
GGAGATCCTGCGCGGCGTCG

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MPAVAETRDTVEGLGQSTYKWGFETEIEMDLAPKGLTEDTIRLISHRKQEPEWLLEWRLKAFQAWQAMPEPTWAKVSHPP
IDFQDAHYYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLHEQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLA
KAGVIFCPISEAVREHPDLVRRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFERTLI
VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGGIYNFVTKRGACRGARSKISWTQV
ETGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQADTGTKMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGG
RNFTQCDSLLIGDQCGAHTVPYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFA
VEAQKLLQISLEGSVG

Sequences:

>Translated_496_residues
MPAVAETRDTVEGLGQSTYKWGFETEIEMDLAPKGLTEDTIRLISHRKQEPEWLLEWRLKAFQAWQAMPEPTWAKVSHPP
IDFQDAHYYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLHEQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLA
KAGVIFCPISEAVREHPDLVRRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFERTLI
VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGGIYNFVTKRGACRGARSKISWTQV
ETGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQADTGTKMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGG
RNFTQCDSLLIGDQCGAHTVPYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFA
VEAQKLLQISLEGSVG
>Mature_495_residues
PAVAETRDTVEGLGQSTYKWGFETEIEMDLAPKGLTEDTIRLISHRKQEPEWLLEWRLKAFQAWQAMPEPTWAKVSHPPI
DFQDAHYYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLHEQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLAK
AGVIFCPISEAVREHPDLVRRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFERTLIV
VEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGGIYNFVTKRGACRGARSKISWTQVE
TGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQADTGTKMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGGR
NFTQCDSLLIGDQCGAHTVPYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFAV
EAQKLLQISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=497, Percent_Identity=60.7645875251509, Blast_Score=639, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54820; Mature: 54688

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVAETRDTVEGLGQSTYKWGFETEIEMDLAPKGLTEDTIRLISHRKQEPEWLLEWRLK
CCCCCHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
AFQAWQAMPEPTWAKVSHPPIDFQDAHYYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLH
HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCC
EQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLAKAGVIFCPISEAVREHPDLV
HHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCCHHHH
RRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFERTLI
HHHHCCCCCCCHHHHHHHHHHEEECCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEE
VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGGIYN
EEECCCCEEHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCHHH
FVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQADTGT
HHHHCCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCC
KMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGGRNFTQCDSLLIGDQCGAHTV
EEEEECCCCCCEEEEEHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCEEECCCCCCCCC
PYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFA
CCEECCCCCEEEECHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
VEAQKLLQISLEGSVG
HHHHHHEEEEECCCCC
>Mature Secondary Structure 
PAVAETRDTVEGLGQSTYKWGFETEIEMDLAPKGLTEDTIRLISHRKQEPEWLLEWRLK
CCCCHHHHHHHHCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
AFQAWQAMPEPTWAKVSHPPIDFQDAHYYAAPKKKTGPKSLDEVDPELLRTYEKLGIPLH
HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCCC
EQALLAGVEVPEGQEARAPVAVDAVFDSVSVVTTFRETLAKAGVIFCPISEAVREHPDLV
HHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHCCHHHH
RRYLGSVVPVADNFYAALNSAVFTDGSFVYVPRGVRCPMELSTYFRINARNTGQFERTLI
HHHHCCCCCCCHHHHHHHHHHEEECCCEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEE
VVEDGASVSYLEGCTAPMRDENQLHAAVVELVAMDDASIKYSTVQNWYPGDENGRGGIYN
EEECCCCEEHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCCCCHHH
FVTKRGACRGARSKISWTQVETGSAITWKYPSCILQGDGAVGEFYSVAVTNNHQQADTGT
HHHHCCCCCCCCCCCEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCC
KMIHIGRNTRSTIIAKTISAGHSDSTYRGLVRMMPKASGGRNFTQCDSLLIGDQCGAHTV
EEEEECCCCCCEEEEEHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCEEECCCCCCCCC
PYIESRNMSAKIEHEATTSKISEDQLFYCRQRGLSEEDAVGLIVNGFCKDVLKELPMEFA
CCEECCCCCEEEECHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
VEAQKLLQISLEGSVG
HHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]