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The map label for this gene is yfhP [C]

Identifier: 162148831

GI number: 162148831

Start: 3153818

End: 3154303

Strand: Reverse

Name: yfhP [C]

Synonym: GDI_3060

Alternate gene names: 162148831

Gene position: 3154303-3153818 (Counterclockwise)

Preceding gene: 162148832

Following gene: 162148830

Centisome position: 79.97

GC content: 69.55

Gene sequence:

>486_bases
ATGCTGAAGCTGTCGAAGCTGACCGACTATGCCGTCGTGGCCCTGGTCCGTCTGGCGCAGGAGGACGAGGTGATGACCTC
GCCCGCGCTGTCGCAGGCGACGGGTATTCCCGAACCGACCGTGGCCAAGGTGCTGAAGATCCTGGCGGTCCATGACCTGG
TGGTATCCCTGCGCGGCGCGCGGGGGGGATACCGGCTGGCCCGTCCGTTGAACGATATTTCCGTGGCGCGGGTCATTACC
GCCGTGGACGGGCCGATTTCGCTGACGGCATGCGTGGATGGCGGCGGGTGCGACACGCGCCCGTTCTGCGGCGTGTGCGG
GCAATGGGATGCGGTCAACGATGCGATCCGCGGGGCCCTGTCCGCGATCACGCTGGCCGACATGCGCGCGCACGGCCAGG
GTGTCCAGGGCCCATGCGTCGAAGGGCAGGGGGGCCGTCACGGGCTCCAGGATACATCCGGCGCCGGCCCGGCCGTCGCG
GTCTGA

Upstream 100 bases:

>100_bases
CGTCGCGGCGAAGCATCTGGGTAAATCAGGACTGATTTGGTCCGTTATGTCTCTGGCGTACAGGCCGGGGGTGCACAGGC
CGGGTAGGAAAGGGGCGCGG

Downstream 100 bases:

>100_bases
GGGAGAGGAAAGAGATGCCAGCGGTTGCCGAAACCCGCGATACGGTCGAAGGCCTGGGTCAATCCACCTATAAATGGGGG
TTCGAGACCGAGATCGAGAT

Product: Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MLKLSKLTDYAVVALVRLAQEDEVMTSPALSQATGIPEPTVAKVLKILAVHDLVVSLRGARGGYRLARPLNDISVARVIT
AVDGPISLTACVDGGGCDTRPFCGVCGQWDAVNDAIRGALSAITLADMRAHGQGVQGPCVEGQGGRHGLQDTSGAGPAVA
V

Sequences:

>Translated_161_residues
MLKLSKLTDYAVVALVRLAQEDEVMTSPALSQATGIPEPTVAKVLKILAVHDLVVSLRGARGGYRLARPLNDISVARVIT
AVDGPISLTACVDGGGCDTRPFCGVCGQWDAVNDAIRGALSAITLADMRAHGQGVQGPCVEGQGGRHGLQDTSGAGPAVA
V
>Mature_161_residues
MLKLSKLTDYAVVALVRLAQEDEVMTSPALSQATGIPEPTVAKVLKILAVHDLVVSLRGARGGYRLARPLNDISVARVIT
AVDGPISLTACVDGGGCDTRPFCGVCGQWDAVNDAIRGALSAITLADMRAHGQGVQGPCVEGQGGRHGLQDTSGAGPAVA
V

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16484; Mature: 16484

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLSKLTDYAVVALVRLAQEDEVMTSPALSQATGIPEPTVAKVLKILAVHDLVVSLRGA
CCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
RGGYRLARPLNDISVARVITAVDGPISLTACVDGGGCDTRPFCGVCGQWDAVNDAIRGAL
CCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
SAITLADMRAHGQGVQGPCVEGQGGRHGLQDTSGAGPAVAV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKLSKLTDYAVVALVRLAQEDEVMTSPALSQATGIPEPTVAKVLKILAVHDLVVSLRGA
CCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
RGGYRLARPLNDISVARVITAVDGPISLTACVDGGGCDTRPFCGVCGQWDAVNDAIRGAL
CCCCHHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
SAITLADMRAHGQGVQGPCVEGQGGRHGLQDTSGAGPAVAV
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]